1IVM
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5WQV
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![BU of 5wqv by Molmil](/molmil-images/mine/5wqv) | Crystal structure of PriB mutant - S55A | 分子名称: | Primosomal replication protein N | 著者 | Fujiyama, S, Shiroishi, M, Katayama, T, Abe, Y, Ueda, T. | 登録日 | 2016-11-28 | 公開日 | 2017-11-29 | 最終更新日 | 2019-06-12 | 実験手法 | X-RAY DIFFRACTION (1.97 Å) | 主引用文献 | Insight into the interaction between PriB and DnaT on bacterial DNA replication restart: Significance of the residues on PriB dimer interface and highly acidic region on DnaT. Biochim Biophys Acta Proteins Proteom, 1867, 2019
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2RU8
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![BU of 2ru8 by Molmil](/molmil-images/mine/2ru8) | DnaT C-terminal domain | 分子名称: | Primosomal protein 1 | 著者 | Abe, Y, Tani, J, Fujiyama, S, Urabe, M, Sato, K, Aramaki, T, Katayama, T, Ueda, T. | 登録日 | 2014-01-29 | 公開日 | 2014-10-08 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | Structure and mechanism of the primosome protein DnaT-functional structures for homotrimerization, dissociation of ssDNA from the PriB·ssDNA complex, and formation of the DnaT·ssDNA complex. Febs J., 281, 2014
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2RT6
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![BU of 2rt6 by Molmil](/molmil-images/mine/2rt6) | Backbone 1H, 13C, and 15N Chemical Shift Assignments for PriC N-terminal domain | 分子名称: | Primosomal replication protein N'' | 著者 | Aramaki, T, Abe, Y, Katayama, T, Ueda, T. | 登録日 | 2013-04-24 | 公開日 | 2013-08-07 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the N-terminal domain of a replication restart primosome factor, PriC, in Escherichia coli. Protein Sci., 22, 2013
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2RUP
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![BU of 2rup by Molmil](/molmil-images/mine/2rup) | Solution structure of rat P2X4 receptor head domain | 分子名称: | P2X purinoceptor 4 | 著者 | Abe, Y, Igawa, T, Tsuda, M, Inoue, K, Ueda, T. | 登録日 | 2014-11-12 | 公開日 | 2015-02-04 | 最終更新日 | 2023-06-14 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the rat P2X4 receptor head domain involved in inhibitory metal binding FEBS Lett., 589, 2015
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3VJR
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![BU of 3vjr by Molmil](/molmil-images/mine/3vjr) | Crystal structure of Peptidyl-tRNA hydrolase from Escherichia coli in complex with the CCA-acceptor-T[PSI]C domain of tRNA | 分子名称: | Peptidyl-tRNA hydrolase, tRNA CCA-acceptor | 著者 | Ito, K, Murakami, R, Mochizuki, M, Qi, H, Shimizu, Y, Miura, K.I, Ueda, T, Uchiumi, T. | 登録日 | 2011-10-28 | 公開日 | 2012-09-12 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural basis for the substrate recognition and catalysis of peptidyl-tRNA hydrolase. Nucleic Acids Res., 40, 2012
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2MLQ
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![BU of 2mlq by Molmil](/molmil-images/mine/2mlq) | Human CCR2 Membrane-Proximal C-Terminal Region (PRO-C) in a frount bound form | 分子名称: | MCP-1 receptor | 著者 | Esaki, K, Yoshinaga, S, Tsuji, T, Toda, E, Terashima, Y, Saitoh, T, Kohda, D, Kohno, T, Osawa, M, Ueda, T, Shimada, I, Matsushima, K, Terasawa, H. | 登録日 | 2014-03-04 | 公開日 | 2014-10-08 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | Structural basis for the binding of the membrane-proximal C-terminal region of chemokine receptor CCR2 with the cytosolic regulator FROUNT. Febs J., 281, 2014
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2MLO
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![BU of 2mlo by Molmil](/molmil-images/mine/2mlo) | Human CCR2 Membrane-Proximal C-Terminal Region (PRO-C) in a Membrane bound form | 分子名称: | MCP-1 receptor | 著者 | Esaki, K, Yoshinaga, S, Tsuji, T, Toda, E, Terashima, Y, Saitoh, T, Kohda, D, Kohno, T, Osawa, M, Ueda, T, Shimada, I, Matsushima, K, Terasawa, H. | 登録日 | 2014-03-04 | 公開日 | 2014-10-08 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | Structural basis for the binding of the membrane-proximal C-terminal region of chemokine receptor CCR2 with the cytosolic regulator FROUNT. Febs J., 281, 2014
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8YTD
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![BU of 8ytd by Molmil](/molmil-images/mine/8ytd) | Crystal Structure of TrkA D5 domain in complex with two different macrocyclic peptides | 分子名称: | 1,2-ETHANEDIOL, High affinity nerve growth factor receptor, Macrocyclic Peptide | 著者 | Yamada, T, Mihara, K, Ueda, T, Yamauchi, D, Shimizu, M, Ando, A, Mayumi, K, Nakata, Z, Mikamiyama, H. | 登録日 | 2024-03-25 | 公開日 | 2024-07-10 | 最終更新日 | 2024-07-17 | 実験手法 | X-RAY DIFFRACTION (2.34 Å) | 主引用文献 | Discovery and Hit to Lead Optimization of Macrocyclic Peptides as Novel Tropomyosin Receptor Kinase A Antagonists. J.Med.Chem., 2024
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8YTE
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![BU of 8yte by Molmil](/molmil-images/mine/8yte) | Crystal Structure of TrkA D5 domain in complex with macrocyclic peptide | 分子名称: | 1,2-ETHANEDIOL, AMINOMETHYLAMIDE, High affinity nerve growth factor receptor, ... | 著者 | Yamada, T, Mihara, K, Ueda, T, Yamauchi, D, Shimizu, M, Ando, A, Mayumi, K, Nakata, Z, Mikamiyama, H. | 登録日 | 2024-03-25 | 公開日 | 2024-07-10 | 最終更新日 | 2024-07-17 | 実験手法 | X-RAY DIFFRACTION (2.26 Å) | 主引用文献 | Discovery and Hit to Lead Optimization of Macrocyclic Peptides as Novel Tropomyosin Receptor Kinase A Antagonists. J.Med.Chem., 2024
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1FLQ
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1FLU
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1FN5
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1FLW
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1FLY
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8J3S
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![BU of 8j3s by Molmil](/molmil-images/mine/8j3s) | Complex structure of human cytomegalovirus protease and a macrocyclic peptide ligand | 分子名称: | Assemblin, PHE-ILE-THR-GLY-HIS-TYR-TRP-VAL-ARG-PHE-LEU-PRO-CYS-GLY | 著者 | Yoshida, S, Sako, Y, Nikaido, E, Ueda, T, Kozono, I, Ichihashi, Y, Nakahashi, A, Onishi, M, Yamatsu, Y, Kato, T, Nishikawa, J, Tachibana, Y. | 登録日 | 2023-04-18 | 公開日 | 2023-11-08 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3.09 Å) | 主引用文献 | Peptide-to-Small Molecule: Discovery of Non-Covalent, Active-Site Inhibitors of beta-Herpesvirus Proteases. Acs Med.Chem.Lett., 14, 2023
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8J3T
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![BU of 8j3t by Molmil](/molmil-images/mine/8j3t) | Complex structure of human cytomegalovirus protease and a non-covalent small-molecule ligand | 分子名称: | (4R)-1-[1-[(S)-[1-cyclopentyl-3-(2-methylphenyl)pyrazol-4-yl]-(4-methylphenyl)methyl]-2-oxidanylidene-pyridin-3-yl]-3-methyl-2-oxidanylidene-N-(3-oxidanylidene-2-azabicyclo[2.2.2]octan-4-yl)imidazolidine-4-carboxamide, Assemblin | 著者 | Yoshida, S, Sako, Y, Nikaido, E, Ueda, T, Kozono, I, Ichihashi, Y, Nakahashi, A, Onishi, M, Yamatsu, Y, Kato, T, Nishikawa, J, Tachibana, Y. | 登録日 | 2023-04-18 | 公開日 | 2023-11-08 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Peptide-to-Small Molecule: Discovery of Non-Covalent, Active-Site Inhibitors of beta-Herpesvirus Proteases. Acs Med.Chem.Lett., 14, 2023
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6KZA
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![BU of 6kza by Molmil](/molmil-images/mine/6kza) | Crystal structure of the complex of the interaction domains of E. coli DnaB helicase and DnaC helicase loader | 分子名称: | DNA replication protein DnaC, Replicative DNA helicase | 著者 | Nagata, K, Okada, A, Ohtsuka, J, Ohkuri, T, Akama, Y, Sakiyama, Y, Miyazaki, E, Horita, S, Katayama, T, Ueda, T, Tanokura, M. | 登録日 | 2019-09-23 | 公開日 | 2019-11-20 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (3.1 Å) | 主引用文献 | Crystal structure of the complex of the interaction domains of Escherichia coli DnaB helicase and DnaC helicase loader: structural basis implying a distortion-accumulation mechanism for the DnaB ring opening caused by DnaC binding. J.Biochem., 167, 2020
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1WOC
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![BU of 1woc by Molmil](/molmil-images/mine/1woc) | Crystal structure of PriB | 分子名称: | Primosomal replication protein n | 著者 | Shioi, S, Ose, T, Maenaka, K, Abe, Y, Kohda, D, Katayama, T, Ueda, T. | 登録日 | 2004-08-13 | 公開日 | 2005-01-25 | 最終更新日 | 2012-12-05 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of a biologically functional form of PriB from Escherichia coli reveals a potential single-stranded DNA-binding site Biochem.Biophys.Res.Commun., 326, 2005
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1SKY
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![BU of 1sky by Molmil](/molmil-images/mine/1sky) | CRYSTAL STRUCTURE OF THE NUCLEOTIDE FREE ALPHA3BETA3 SUB-COMPLEX OF F1-ATPASE FROM THE THERMOPHILIC BACILLUS PS3 | 分子名称: | F1-ATPASE, SULFATE ION | 著者 | Shirakihara, Y, Leslie, A.G.W, Abrahams, J.P, Walker, J.E, Ueda, T, Sekimoto, Y, Kambara, M, Saika, K, Kagawa, Y, Yoshida, M. | 登録日 | 1997-02-26 | 公開日 | 1998-03-04 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | The crystal structure of the nucleotide-free alpha 3 beta 3 subcomplex of F1-ATPase from the thermophilic Bacillus PS3 is a symmetric trimer. Structure, 5, 1997
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1IR8
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1IOQ
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![BU of 1ioq by Molmil](/molmil-images/mine/1ioq) | STABILIZATION OF HEN EGG WHITE LYSOZYME BY A CAVITY-FILLING MUTATION | 分子名称: | LYSOZYME C | 著者 | Ohmura, T, Ueda, T, Ootsuka, K, Saito, M, Imoto, T. | 登録日 | 2001-03-28 | 公開日 | 2001-04-11 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.79 Å) | 主引用文献 | Stabilization of hen egg white lysozyme by a cavity-filling mutation. Protein Sci., 10, 2001
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1IOS
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![BU of 1ios by Molmil](/molmil-images/mine/1ios) | STABILIZATION OF HEN EGG WHITE LYSOZYME BY A CAVITY-FILLING MUTATION | 分子名称: | LYSOZYME C | 著者 | Ohmura, T, Ueda, T, Ootsuka, K, Saito, M, Imoto, T. | 登録日 | 2001-03-28 | 公開日 | 2001-04-11 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.76 Å) | 主引用文献 | Stabilization of hen egg white lysozyme by a cavity-filling mutation. Protein Sci., 10, 2001
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1J1F
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![BU of 1j1f by Molmil](/molmil-images/mine/1j1f) | Crystal structure of the RNase MC1 mutant N71T in complex with 5'-GMP | 分子名称: | GUANOSINE-5'-MONOPHOSPHATE, RIBONUCLEASE MC1 | 著者 | Numata, T, Suzuki, A, Kakuta, Y, Kimura, K, Yao, M, Tanaka, I, Yoshida, Y, Ueda, T, Kimura, M. | 登録日 | 2002-12-03 | 公開日 | 2003-05-20 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Crystal Structures of the Ribonuclease MC1 Mutants N71T and N71S in Complex with 5'-GMP: Structural Basis for Alterations in Substrate Specificity Biochemistry, 42, 2003
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1UIF
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