Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1Z96
DownloadVisualize
BU of 1z96 by Molmil
Crystal structure of the Mud1 UBA domain
分子名称: UBA-domain protein mud1
著者Trempe, J.-F, Brown, N.R, Lowe, E.D, Noble, M.E.M, Gordon, C, Campbell, I.D, Johnson, L.N, Endicott, J.A.
登録日2005-03-31
公開日2005-10-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanism of Lys48-linked polyubiquitin chain recognition by the Mud1 UBA domain
Embo J., 24, 2005
2BWE
DownloadVisualize
BU of 2bwe by Molmil
The crystal structure of the complex between the UBA and UBL domains of Dsk2
分子名称: DSK2
著者Lowe, E.D, Hasan, N, Trempe, J.-F, Fonso, L, Noble, M.E.M, Endicott, J.A, Johnson, L.N, Brown, N.R.
登録日2005-07-13
公開日2006-01-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structures of the Dsk2 Ubl and Uba Domains and Their Complex.
Acta Crystallogr.,Sect.D, 62, 2006
2BWB
DownloadVisualize
BU of 2bwb by Molmil
Crystal structure of the UBA domain of Dsk2 from S. cerevisiae
分子名称: UBIQUITIN-LIKE PROTEIN DSK2
著者Lowe, E.D, Hasan, N, Trempe, J.-F, Fonso, L, Noble, M.E.M, Endicott, J.A, Johnson, L.N, Brown, N.R.
登録日2005-07-13
公開日2006-01-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of the Dsk2 Ubl and Uba Domains and Their Complex.
Acta Crystallogr.,Sect.D, 62, 2006
2BWF
DownloadVisualize
BU of 2bwf by Molmil
Crystal structure of the UBL domain of Dsk2 from S. cerevisiae
分子名称: FORMIC ACID, UBIQUITIN-LIKE PROTEIN DSK2
著者Lowe, E.D, Hasan, N, Trempe, J.-F, Fonso, L, Noble, M.E.M, Endicott, J.A, Johnson, L.N, Brown, N.R.
登録日2005-07-13
公開日2006-01-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structures of the Dsk2 Ubl and Uba Domains and Their Complex.
Acta Crystallogr.,Sect.D, 62, 2006
1L1P
DownloadVisualize
BU of 1l1p by Molmil
Solution Structure of the PPIase Domain from E. coli Trigger Factor
分子名称: trigger factor
著者Kozlov, G, Trempe, J.-F, Perreault, A, Wong, M, Denisov, A, Ghandi, S, Gehring, K, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2002-02-19
公開日2003-06-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of the Closed Form of a Peptidyl-Prolyl Isomerase Reveals the Mechanism of Protein Folding
To be Published
5KES
DownloadVisualize
BU of 5kes by Molmil
Solution structure of the yeast Ddi1 HDD domain
分子名称: DNA damage-inducible protein 1
著者Trempe, J.-F, Ratcliffe, C, Veverka, V, Saskova, K, Gehring, K.
登録日2016-06-10
公開日2016-10-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family.
Sci Rep, 6, 2016
1FC8
DownloadVisualize
BU of 1fc8 by Molmil
NMR SOLUTION STRUCTURE OF A CHIMERIC OLIGONUCLEOTIDE HAIRPIN R(GGAC)D(TTCG)2'F-A(GTCC)
分子名称: 5'-R(*GP*GP*AP*CP)D(*TP*TP*CP*GP*(GFL)P*(TAF)P*(CFL)P*(CFL))-3'
著者Trempe, J.-F, Gehring, K.
登録日2000-07-18
公開日2001-05-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR solution structure of an oligonucleotide hairpin with a 2'F-ANA/RNA stem: implications for RNase H specificity toward DNA/RNA hybrid duplexes.
J.Am.Chem.Soc., 123, 2001
4Z2Z
DownloadVisualize
BU of 4z2z by Molmil
New crystal structure of yeast Ddi1 aspartyl protease reveals substrate engagement mode
分子名称: DNA damage-inducible protein 1
著者Trempe, J.-F, Feng, X, Gehring, K.
登録日2015-03-30
公開日2016-04-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family.
Sci Rep, 6, 2016
5VSX
DownloadVisualize
BU of 5vsx by Molmil
Structure of the Ubl domain of Sacsin
分子名称: Sacsin
著者Trempe, J.-F, Pande, H, Shenker, S, Gehring, K.
登録日2017-05-13
公開日2017-05-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of ubiquitin-like (Ubl) and Hsp90-like domains of sacsin provide insight into pathological mutations.
J. Biol. Chem., 293, 2018
5VSZ
DownloadVisualize
BU of 5vsz by Molmil
Structure of the Ubl domain of Sacsin mutant L78M
分子名称: Sacsin
著者Trempe, J.-F, Pande, H, Shenker, S, Gehring, K.
登録日2017-05-15
公開日2017-05-31
最終更新日2018-08-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of ubiquitin-like (Ubl) and Hsp90-like domains of sacsin provide insight into pathological mutations.
J. Biol. Chem., 293, 2018
2X5N
DownloadVisualize
BU of 2x5n by Molmil
Crystal Structure of the SpRpn10 VWA domain
分子名称: 26S PROTEASOME REGULATORY SUBUNIT RPN10, SULFATE ION
著者Riedinger, C, Boehringer, J, Trempe, J.-F, Lowe, E.D, Brown, N.R, Gehring, K, Noble, M.E.M, Gordon, C, Endicott, J.A.
登録日2010-02-10
公開日2010-08-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The Structure of Rpn10 and its Interactions with Polyubiquitin Chains and the Proteasome Subunit Rpn12.
J.Biol.Chem., 285, 2010
9BJA
DownloadVisualize
BU of 9bja by Molmil
C. difficile Tcdb cysteine protease domain in complex with IP6
分子名称: INOSITOL HEXAKISPHOSPHATE, Toxin B
著者Veyron, S, Cummer, R.
登録日2024-04-25
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-activity relationship of inositol thiophosphate analogs as allosteric activators of Clostridioides difficile Toxin B
Chemrxiv, 2024
1G9L
DownloadVisualize
BU of 1g9l by Molmil
SOLUTION STRUCTURE OF THE PABC DOMAIN OF HUMAN POLY(A) BINDING PROTEIN
分子名称: POLYADENYLATE-BINDING PROTEIN 1
著者Kozlov, G, Trempe, J.-F, Khaleghpour, K, Kahvejian, A, Ekiel, I, Gehring, K.
登録日2000-11-24
公開日2001-03-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure and function of the C-terminal PABC domain of human poly(A)-binding protein.
Proc.Natl.Acad.Sci.USA, 98, 2001
6NBX
DownloadVisualize
BU of 6nbx by Molmil
T.elongatus NDH (data-set 2)
分子名称: IRON/SULFUR CLUSTER, NAD(P)H-quinone oxidoreductase chain 4 1, NAD(P)H-quinone oxidoreductase subunit 1, ...
著者Laughlin, T.G, Bayne, A, Trempe, J.-F, Savage, D.F, Davies, K.M.
登録日2018-12-10
公開日2019-02-27
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of the complex I-like molecule NDH of oxygenic photosynthesis.
Nature, 566, 2019
6NBQ
DownloadVisualize
BU of 6nbq by Molmil
T.elongatus NDH (data-set 1)
分子名称: IRON/SULFUR CLUSTER, NAD(P)H-quinone oxidoreductase chain 4 1, NAD(P)H-quinone oxidoreductase subunit 2, ...
著者Laughlin, T.G, Bayne, A, Trempe, J.-F, Savage, D.F, Davies, K.M.
登録日2018-12-09
公開日2019-02-27
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the complex I-like molecule NDH of oxygenic photosynthesis.
Nature, 566, 2019
6NBY
DownloadVisualize
BU of 6nby by Molmil
T.elongatus NDH (composite model)
分子名称: IRON/SULFUR CLUSTER, NAD(P)H-quinone oxidoreductase chain 4 1, NAD(P)H-quinone oxidoreductase subunit 1, ...
著者Laughlin, T.G, Bayne, A, Trempe, J.-F, Savage, D.F, Davies, K.M.
登録日2018-12-10
公開日2019-02-27
最終更新日2020-04-15
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the complex I-like molecule NDH of oxygenic photosynthesis.
Nature, 566, 2019
4K95
DownloadVisualize
BU of 4k95 by Molmil
Crystal Structure of Parkin
分子名称: E3 ubiquitin-protein ligase parkin, ZINC ION
著者Seirafi, M, Menade, M, Sauve, V, Kozlov, G, Trempe, J.-F, Nagar, B, Gehring, K.
登録日2013-04-19
公開日2013-05-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (6.499 Å)
主引用文献Structure of parkin reveals mechanisms for ubiquitin ligase activation.
Science, 340, 2013
4K7D
DownloadVisualize
BU of 4k7d by Molmil
Crystal Structure of Parkin C-terminal RING domains
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase parkin, MALONATE ION, ...
著者Sauve, V, Trempe, J.-F, Menade, M, Gehring, K.
登録日2013-04-17
公開日2013-05-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of parkin reveals mechanisms for ubiquitin ligase activation.
Science, 340, 2013
4RGH
DownloadVisualize
BU of 4rgh by Molmil
Human DNA Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering its Cellular Role
分子名称: CHLORIDE ION, Protein DDI1 homolog 2
著者Brynda, J, Grantz Saskova, K.
登録日2014-09-30
公開日2016-02-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Human DNA Damage-Inducible Protein: From Protein Chemistry and 3D Structure to Deciphering its Cellular Role
To be Published

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon