Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6L93
DownloadVisualize
BU of 6l93 by Molmil
X-ray structure of the ligand-free human TRPV1 ankyrin repeat domain
分子名称: Transient receptor potential cation channel subfamily V member 1
著者Tanaka, M, Hayakawa, K, Unno, M.
登録日2019-11-08
公開日2020-03-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (4.47 Å)
主引用文献Structure determination of the human TRPV1 ankyrin-repeat domain under nonreducing conditions.
Acta Crystallogr.,Sect.F, 76, 2020
7BPR
DownloadVisualize
BU of 7bpr by Molmil
Crystal structure of human TEX101
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, PLATINUM (II) ION, Testis-expressed protein 101
著者Masutani, M, Sakurai, S, Shimizu, T, Ohto, U.
登録日2020-03-23
公開日2020-07-15
最終更新日2020-12-23
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of TEX101, a glycoprotein essential for male fertility, reveals the presence of tandemly arranged Ly6/uPAR domains.
Febs Lett., 594, 2020
7BPS
DownloadVisualize
BU of 7bps by Molmil
Crystal structure of mouse TEX101
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, Testis-expressed protein 101, ...
著者Masutani, M, Sakurai, S, Shimizu, T, Ohto, U.
登録日2020-03-23
公開日2020-07-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of TEX101, a glycoprotein essential for male fertility, reveals the presence of tandemly arranged Ly6/uPAR domains.
Febs Lett., 594, 2020
6GRZ
DownloadVisualize
BU of 6grz by Molmil
Crystal structure of the light chain dimer mH6
分子名称: GLYCEROL, mH6
著者Maritan, M, Ricagno, S, Ambrosetti, A, Oberti, L.
登録日2018-06-13
公開日2019-06-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Inherent Biophysical Properties Modulate the Toxicity of Soluble Amyloidogenic Light Chains
J.Mol.Biol., 2020
8ANF
DownloadVisualize
BU of 8anf by Molmil
Small molecule stabilizer for ERalpha and 14-3-3 (1074359)
分子名称: 14-3-3 protein sigma, 2-chloranyl-N-[3-[1-[2-(4-chloranylphenoxy)-2-methyl-propanoyl]piperidin-4-yl]propyl]ethanamide, Estrogen receptor, ...
著者Konstantinidou, M, Visser, E.J, Vandenboorn, E.M.F, Sheng, C, Jaishankar, P, Overmans, M.J.A.M, Dutta, S, Neitz, J, Renslo, A, Ottmann, C, Brunsveld, L, Arkin, M.
登録日2022-08-05
公開日2023-09-20
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure-Based Optimization of Covalent, Small-Molecule Stabilizers of the 14-3-3 sigma /ER alpha Protein-Protein Interaction from Nonselective Fragments.
J.Am.Chem.Soc., 145, 2023
8AXU
DownloadVisualize
BU of 8axu by Molmil
Small molecule stabilizer for ERalpha and 14-3-3 (1075297)
分子名称: 14-3-3 protein sigma, 2-chloranyl-~{N}-[[1-[1-(4-chloranylphenoxy)cyclopentyl]carbonylpiperidin-4-yl]methyl]ethanamide, Estrogen receptor, ...
著者Konstantinidou, M, Visser, E.J, Vandenboorn, E.M.F, Sheng, C, Jaishankar, P, Overmans, M.J.A.M, Dutta, S, Neitz, J, Renslo, A, Ottmann, C, Brunsveld, L, Arkin, M.
登録日2022-09-01
公開日2023-09-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-Based Optimization of Covalent, Small-Molecule Stabilizers of the 14-3-3 sigma /ER alpha Protein-Protein Interaction from Nonselective Fragments.
J.Am.Chem.Soc., 145, 2023
8AWG
DownloadVisualize
BU of 8awg by Molmil
small molecule stabilizer for ERalpha and 14-3-3 (1074202)
分子名称: 14-3-3 protein sigma, 2-chloranyl-~{N}-[[1-[2-(4-chloranylphenoxy)-2-methyl-propanoyl]piperidin-4-yl]methyl]ethanamide, Estrogen receptor, ...
著者Konstantinidou, M, Visser, E.J, Vandenboorn, E.M.F, Sheng, C, Jaishankar, P, Overmans, M.J.A.M, Dutta, S, Neitz, J, Renslo, A, Ottmann, C, Brunsveld, L, Arkin, M.
登録日2022-08-29
公開日2023-09-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-Based Optimization of Covalent, Small-Molecule Stabilizers of the 14-3-3 sigma /ER alpha Protein-Protein Interaction from Nonselective Fragments.
J.Am.Chem.Soc., 145, 2023
8AZE
DownloadVisualize
BU of 8aze by Molmil
Small molecule stabilizer for ERalpha and 14-3-3 (1075306)
分子名称: 14-3-3 protein sigma, 2-chloranyl-~{N}-[[1-[1-[(4-chlorophenyl)amino]cyclopentyl]carbonylpiperidin-4-yl]methyl]ethanamide, ERalpha peptide, ...
著者Konstantinidou, M, Visser, E.J, Vandenboorn, E.M.F, Sheng, C, Jaishankar, P, Overmans, M.J.A.M, Dutta, S, Neitz, J, Renslo, A, Ottmann, C, Brunsveld, L, Arkin, M.
登録日2022-09-06
公開日2023-09-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-Based Optimization of Covalent, Small-Molecule Stabilizers of the 14-3-3 sigma /ER alpha Protein-Protein Interaction from Nonselective Fragments.
J.Am.Chem.Soc., 145, 2023
8AOY
DownloadVisualize
BU of 8aoy by Molmil
Small molecule stabilizer for ERalpha and 14-3-3 (1075478)
分子名称: 14-3-3 protein sigma, 2-chloranyl-N-[3-[1-[4-[(4-chlorophenyl)amino]oxan-4-yl]carbonylpiperidin-4-yl]propyl]ethanamide, Estrogen receptor, ...
著者Konstantinidou, M, Visser, E.J, Vandenboorn, E.M.F, Sheng, C, Jaishankar, P, Overmans, M.J.A.M, Dutta, S, Neitz, J, Renslo, A, Ottmann, C, Brunsveld, L, Arkin, M.
登録日2022-08-09
公開日2023-09-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure-Based Optimization of Covalent, Small-Molecule Stabilizers of the 14-3-3 sigma /ER alpha Protein-Protein Interaction from Nonselective Fragments.
J.Am.Chem.Soc., 145, 2023
8AXE
DownloadVisualize
BU of 8axe by Molmil
Small molecule stabilizer for ERalpha and 14-3-3 (1074210)
分子名称: 14-3-3 protein sigma, 2-chloranyl-~{N}-[2-[1-[2-(4-chloranylphenoxy)-2-methyl-propanoyl]piperidin-4-yl]ethyl]ethanamide, Estrogen receptor, ...
著者Konstantinidou, M, Visser, E.J, Vandenboorn, E.M.F, Sheng, C, Jaishankar, P, Overmans, M.J.A.M, Dutta, S, Neitz, J, Renslo, A, Ottmann, C, Brunsveld, L, Arkin, M.
登録日2022-08-31
公開日2023-09-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-Based Optimization of Covalent, Small-Molecule Stabilizers of the 14-3-3 sigma /ER alpha Protein-Protein Interaction from Nonselective Fragments.
J.Am.Chem.Soc., 145, 2023
6LL8
DownloadVisualize
BU of 6ll8 by Molmil
Type II inorganic pyrophosphatase (PPase) from the psychrophilic bacterium Shewanella sp. AS-11, Mg-PNP form
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, FLUORIDE ION, ...
著者Horitani, M, Kusubayashi, K, Oshima, K, Yato, A, Sugimoto, H, Watanabe, K.
登録日2019-12-21
公開日2020-03-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献X-ray Crystallography and Electron Paramagnetic Resonance Spectroscopy Reveal Active Site Rearrangement of Cold-Adapted Inorganic Pyrophosphatase.
Sci Rep, 10, 2020
5KHY
DownloadVisualize
BU of 5khy by Molmil
Crystal structure of oxime-linked K6 diubiquitin
分子名称: ETHANOLAMINE, Polyubiquitin-B, ZINC ION
著者Stanley, M, Virdee, S.
登録日2016-06-16
公開日2016-09-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.501 Å)
主引用文献Genetically Directed Production of Recombinant, Isosteric and Nonhydrolysable Ubiquitin Conjugates.
Chembiochem, 17, 2016
5N4G
DownloadVisualize
BU of 5n4g by Molmil
human Fab fragment 12E1 against NHBA from Neisseria meningitidis
分子名称: 1,2-ETHANEDIOL, HEAVY CHAIN, LIGHT CHAIN, ...
著者Maritan, M, Malito, E.
登録日2017-02-10
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structures of human Fabs targeting the Bexsero meningococcal vaccine antigen NHBA.
Acta Crystallogr F Struct Biol Commun, 73, 2017
5N4J
DownloadVisualize
BU of 5n4j by Molmil
human Fab fragment 10C3 against NHBA from Neisseria meningitidis
分子名称: HEAVY CHAIN, LIGHT CHAIN
著者Maritan, M, Malito, E.
登録日2017-02-10
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.503 Å)
主引用文献Crystal structures of human Fabs targeting the Bexsero meningococcal vaccine antigen NHBA.
Acta Crystallogr F Struct Biol Commun, 73, 2017
6LL7
DownloadVisualize
BU of 6ll7 by Molmil
Type II inorganic pyrophosphatase (PPase) from the psychrophilic bacterium Shewanella sp. AS-11, Mn-activated form
分子名称: CALCIUM ION, Inorganic pyrophosphatase, MANGANESE (II) ION
著者Horitani, M, Kusubayashi, K, Oshima, K, Yato, A, Sugimoto, H, Watanabe, K.
登録日2019-12-21
公開日2020-03-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray Crystallography and Electron Paramagnetic Resonance Spectroscopy Reveal Active Site Rearrangement of Cold-Adapted Inorganic Pyrophosphatase.
Sci Rep, 10, 2020
5GSL
DownloadVisualize
BU of 5gsl by Molmil
Glycoside hydrolase A
分子名称: 778aa long hypothetical beta-galactosidase, PHOSPHATE ION
著者Watanabe, M, Kamachi, S, Mine, S.
登録日2016-08-16
公開日2017-02-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Glycoside hydrolase A
To Be Published
5GSM
DownloadVisualize
BU of 5gsm by Molmil
Glycoside hydrolase B with product
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Watanabe, M, Kamachi, S, Mine, S.
登録日2016-08-16
公開日2017-02-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Glycoside hydrolase B with product
To Be Published
5HXV
DownloadVisualize
BU of 5hxv by Molmil
The crystal structure of thermostable xylanase mutant
分子名称: Endo-1,4-beta-xylanase
著者Watanabe, M, Ishikawa, K.
登録日2016-01-31
公開日2016-07-27
最終更新日2020-02-19
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Construction of Thermophilic Xylanase and Its Structural Analysis
Biochemistry, 55, 2016
2CYC
DownloadVisualize
BU of 2cyc by Molmil
Crystal structure of Tyrosyl-tRNA Synthetase complexed with L-tyrosine from Pyrococcus horikoshii
分子名称: TYROSINE, tyrosyl-tRNA synthetase
著者Kuratani, M, Sakai, H, Takahashi, M, Yanagisawa, T, Kobayashi, T, Sakamoto, K, Terada, T, Shirouzu, M, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-06
公開日2005-11-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structures of Tyrosyl-tRNA Synthetases from Archaea
J.Mol.Biol., 355, 2006
2CYA
DownloadVisualize
BU of 2cya by Molmil
Crystal structure of tyrosyl-tRNA synthetase from Aeropyrum pernix
分子名称: SULFATE ION, Tyrosyl-tRNA synthetase
著者Kuratani, M, Sakai, H, Takahashi, M, Yanagisawa, T, Kobayashi, T, Murayama, K, Chen, L, Liu, Z.J, Wang, B.C, Kuroishi, C, Kuramitsu, S, Terada, T, Bessho, Y, Shirouzu, M, Sekine, S.I, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-06
公開日2005-11-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structures of Tyrosyl-tRNA Synthetases from Archaea
J.Mol.Biol., 355, 2005
2CYB
DownloadVisualize
BU of 2cyb by Molmil
Crystal structure of Tyrosyl-tRNA Synthetase complexed with L-tyrosine from Archaeoglobus fulgidus
分子名称: TYROSINE, Tyrosyl-tRNA synthetase
著者Kuratani, M, Sakai, H, Takahashi, M, Yanagisawa, T, Kobayashi, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-06
公開日2005-11-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structures of Tyrosyl-tRNA Synthetases from Archaea
J.Mol.Biol., 355, 2006
4EBW
DownloadVisualize
BU of 4ebw by Molmil
Structure of Focal Adhesion Kinase catalytic domain in complex with novel allosteric inhibitor
分子名称: 1-ethyl-8-(4-ethylphenyl)-5-methyl-1,5-dihydropyrazolo[4,3-c][2,1]benzothiazine 4,4-dioxide, Focal adhesion kinase 1
著者Iwatani, M, Iwata, H, Okabe, A, Skene, R.J, Tomita, N, Hayashi, Y, Aramaki, Y, Hosfield, D.J, Hori, A, Baba, A, Miki, H.
登録日2012-03-25
公開日2012-07-25
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Discovery and characterization of novel allosteric FAK inhibitors.
Eur.J.Med.Chem., 61, 2013
2LRI
DownloadVisualize
BU of 2lri by Molmil
NMR structure of the second PHD finger of AIRE (AIRE-PHD2)
分子名称: Autoimmune regulator, ZINC ION
著者Gaetani, M, Chignola, F, Mollica, L, Quilici, G, Mannella, V, Spiliotopoulos, D, Musco, G.
登録日2012-04-03
公開日2012-10-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献AIRE-PHD fingers are structural hubs to maintain the integrity of chromatin-associated interactome.
Nucleic Acids Res., 40, 2012
2E89
DownloadVisualize
BU of 2e89 by Molmil
Crystal structure of Aquifex aeolicus TilS in a complex with ATP, Magnesium ion, and L-lysine
分子名称: ADENOSINE-5'-TRIPHOSPHATE, LYSINE, MAGNESIUM ION, ...
著者Kuratani, M, Yoshikawa, Y, Takahashi, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-01-19
公開日2007-11-13
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of the initial binding of tRNA(Ile) lysidine synthetase TilS with ATP and L-lysine
To be Published
7CFO
DownloadVisualize
BU of 7cfo by Molmil
Crystal structure of human RXRalpha ligand binding domain complexed with CBTF-EE.
分子名称: 1-[3-(2-ethoxyethoxy)-5,5,8,8-tetramethyl-6,7-dihydronaphthalen-2-yl]-2-(trifluoromethyl)benzimidazole-5-carboxylic acid, GLYCEROL, Retinoic acid receptor RXR-alpha
著者Watanabe, M, Fujihara, M, Motoyama, T, Kawasaki, M, Yamada, S, Takamura, Y, Ito, S, Makishima, M, Nakano, S, Kakuta, H.
登録日2020-06-27
公開日2021-01-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Discovery of a "Gatekeeper" Antagonist that Blocks Entry Pathway to Retinoid X Receptors (RXRs) without Allosteric Ligand Inhibition in Permissive RXR Heterodimers.
J.Med.Chem., 64, 2021

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon