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3AW7
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BU of 3aw7 by Molmil
Crystal structure of tetragonal hen egg white lysozyme at 71.9% relative humidity
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Takayama, Y, Nakasako, M.
登録日2011-03-11
公開日2011-03-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A few low-frequency normal modes predominantly contribute to conformational responses of hen egg white lysozyme in the tetragonal crystal to variations of molecular packing controlled by environmental humidity
Biophys.Chem., 159, 2011
3AW6
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BU of 3aw6 by Molmil
Crystal structure of tetragonal hen egg white lysozyme at 84.2% relative humidity
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Takayama, Y, Nakasako, M.
登録日2011-03-11
公開日2011-03-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A few low-frequency normal modes predominantly contribute to conformational responses of hen egg white lysozyme in the tetragonal crystal to variations of molecular packing controlled by environmental humidity
Biophys.Chem., 159, 2011
1K9A
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BU of 1k9a by Molmil
Crystal structure analysis of full-length carboxyl-terminal Src kinase at 2.5 A resolution
分子名称: Carboxyl-terminal Src kinase
著者Ogawa, A, Takayama, Y, Nagata, A, Chong, K.T, Takeuchi, S, Sakai, H, Nakagawa, A, Nada, S, Okada, M, Tsukihara, T.
登録日2001-10-28
公開日2002-03-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the carboxyl-terminal Src kinase, Csk.
J.Biol.Chem., 277, 2002
2KX9
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BU of 2kx9 by Molmil
Solution Structure of the Enzyme I dimer Using Residual Dipolar Couplings and Small Angle X-Ray Scattering
分子名称: Phosphoenolpyruvate-protein phosphotransferase
著者Schwieters, C.D, Suh, J, Grishaev, A, Takayama, Y, Guirlando, R, Clore, G.
登録日2010-04-29
公開日2010-09-15
最終更新日2024-05-01
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献Solution structure of the 128 kDa enzyme I dimer from Escherichia coli and its 146 kDa complex with HPr using residual dipolar couplings and small- and wide-angle X-ray scattering.
J.Am.Chem.Soc., 132, 2010
2LOE
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BU of 2loe by Molmil
Structure of the Plasmodium 6-cysteine s48/45 Domain
分子名称: 6-cysteine protein, putative
著者Cai, M, Arredondo, S.A, Clore, M.G, Miller, L.H, Takayama, Y, Macdonald, N.J, Enderson, E.D, Aravind, L.
登録日2012-01-23
公開日2012-04-18
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure of the Plasmodium 6-cysteine s48/45 domain.
Proc.Natl.Acad.Sci.USA, 109, 2012
2CVC
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BU of 2cvc by Molmil
Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Hildenborough)
分子名称: HEME C, High-molecular-weight cytochrome c precursor
著者Suto, K, Sato, M, Shibata, N, Kitamura, M, Morimoto, Y, Takayama, Y, Ozawa, K, Akutsu, H, Higuchi, Y, Yasuoka, N.
登録日2005-06-02
公開日2006-06-06
最終更新日2019-10-02
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of High-Molecular Weight Cytochrome c
To be Published
2XDF
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BU of 2xdf by Molmil
Solution Structure of the Enzyme I Dimer Complexed with HPr Using Residual Dipolar Couplings and Small Angle X-Ray Scattering
分子名称: PHOSPHOCARRIER PROTEIN HPR, PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE
著者Schwieters, C.D, Suh, J.-Y, Grishaev, A, Guirlando, R, Takayama, Y, Clore, G.M.
登録日2010-04-30
公開日2010-09-22
最終更新日2024-05-15
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献Solution Structure of the 128 kDa Enzyme I Dimer from Escherichia Coli and its 146 kDa Complex with Hpr Using Residual Dipolar Couplings and Small- and Wide-Angle X-Ray Scattering.
J.Am.Chem.Soc., 132, 2010
2DGE
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BU of 2dge by Molmil
Crystal structure of oxidized cytochrome C6A from Arabidopsis thaliana
分子名称: Cytochrome c6, PROTOPORPHYRIN IX CONTAINING FE, ZINC ION
著者Chida, H, Yokoyama, T, Kawai, F, Nakazawa, A, Akazaki, H, Takayama, Y, Hirano, T, Suruga, K, Satoh, T, Yamada, S, Kawachi, R, Unzai, S, Nishio, T, Park, S.-Y, Oku, T.
登録日2006-03-11
公開日2006-07-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of oxidized cytochrome c(6A) from Arabidopsis thaliana
Febs Lett., 580, 2006
2L5H
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BU of 2l5h by Molmil
Solution Structure of the H189Q mutant of the Enzyme I dimer Using Residual Dipolar Couplings and Small Angle X-Ray Scattering
分子名称: Phosphoenolpyruvate-protein phosphotransferase
著者Takayama, Y.D, Schwieters, C.D, Grishaev, A, Guirlando, R, Clore, G.
登録日2010-11-01
公開日2011-01-12
最終更新日2024-05-01
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献Combined Use of Residual Dipolar Couplings and Solution X-ray Scattering To Rapidly Probe Rigid-Body Conformational Transitions in a Non-phosphorylatable Active-Site Mutant of the 128 kDa Enzyme I Dimer.
J.Am.Chem.Soc., 133, 2011
2YXC
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BU of 2yxc by Molmil
The H25M mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H.
登録日2007-04-26
公開日2008-04-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Strategic roles of axial histidines in structure formation and redox regulation of tetraheme cytochrome c3.
Biochemistry, 47, 2008
2YYW
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BU of 2yyw by Molmil
The F20M mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H.
登録日2007-05-02
公開日2008-05-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Structures of Noncoordinated Aromatic Residue Mutants in Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
To be Published
2YYX
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BU of 2yyx by Molmil
The Y65A mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H.
登録日2007-05-02
公開日2008-05-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structures of Noncoordinated Aromatic Residue Mutants in Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
To be Published
2Z47
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BU of 2z47 by Molmil
The Y66L mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, HEME C
著者Higuchi, Y, Komori, H.
登録日2007-06-13
公開日2008-06-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structures of Noncoordinated Aromatic Residue Mutants in Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
To be Published
2EWK
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BU of 2ewk by Molmil
The T24V mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
分子名称: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
著者Higuchi, Y, Komori, H, Morita, K.
登録日2005-11-03
公開日2006-11-28
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Strategic roles of axial histidines in structure formation and redox regulation of tetraheme cytochrome c3.
Biochemistry, 47, 2008
1WR5
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BU of 1wr5 by Molmil
Three dimensional Structure of the E41K mutant of Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
分子名称: Cytochrome c3, ETHANOL, HEME C
著者Tomimoto, Y, Ogata, H, Higuchi, Y.
登録日2004-10-11
公開日2004-10-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Role of the aromatic ring of Tyr43 in tetraheme cytochrome c(3) from Desulfovibrio vulgaris Miyazaki F.
Biophys.J., 85, 2003
1J0P
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BU of 1j0p by Molmil
Three dimensional Structure of the Y43L mutant of Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
分子名称: Cytochrome c3, ETHANOL, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Ozawa, K, Yasukawa, F, Kumagai, J, Ohmura, T, Cusanvich, M.A, Tomimoto, Y, Ogata, H, Higuchi, Y, Akutsu, H.
登録日2002-11-19
公開日2003-11-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (0.91 Å)
主引用文献Role of the aromatic ring of Tyr43 in tetraheme cytochrome c(3) from Desulfovibrio vulgaris Miyazaki F.
Biophys.J., 85, 2003
1J0O
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BU of 1j0o by Molmil
High Resolution Crystal Structure of the wild type Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
分子名称: Cytochrome c3, ETHANOL, PROTOPORPHYRIN IX CONTAINING FE
著者Ozawa, K, Yasukawa, F, Kumagai, J, Ohmura, T, Cusanvich, M.A, Tomimoto, Y, Ogata, H, Higuchi, Y, Akutsu, H.
登録日2002-11-19
公開日2003-11-19
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Role of the aromatic ring of Tyr43 in tetraheme cytochrome c(3) from Desulfovibrio vulgaris Miyazaki F.
Biophys.J., 85, 2003
7C6B
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BU of 7c6b by Molmil
Crystal structure of Ago2 MID domain in complex with 6-(3-(2-carboxyethyl)phenyl)purine riboside monophosphate
分子名称: 3-[3-[9-[(2R,3R,4S,5R)-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]purin-6-yl]phenyl]propanoic acid, PHOSPHATE ION, Protein argonaute-2
著者Suzuki, M, Takahashi, Y, Saito, J, Miyagi, H, Shinohara, F.
登録日2020-05-21
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献siRNA potency enhancement via chemical modifications of nucleotide bases at the 5'-end of the siRNA guide strand.
Rna, 27, 2021
7D7U
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BU of 7d7u by Molmil
Crystal structure of Ago2 MID domain in complex with 8-Br-adenosin-5'-monophosphate
分子名称: 8-BROMO-ADENOSINE-5'-MONOPHOSPHATE, Protein argonaute-2
著者Suzuki, M, Takahashi, Y, Saito, J, Miyagi, H, Shinohara, F.
登録日2020-10-06
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献siRNA potency enhancement via chemical modifications of nucleotide bases at the 5'-end of the siRNA guide strand.
Rna, 27, 2021

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