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7DI8
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BU of 7di8 by Molmil
Electron crystallographic structure of Catalase using a direct electron detector at 300 kV
分子名称: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
著者Takaba, K, Maki-Yonekura, S, Yonekura, K.
登録日2020-11-18
公開日2020-12-09
最終更新日2024-03-27
実験手法ELECTRON CRYSTALLOGRAPHY (3.2 Å)
主引用文献Protein and Organic-Molecular Crystallography With 300kV Electrons on a Direct Electron Detector.
Front Mol Biosci, 7, 2020
5GV8
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BU of 5gv8 by Molmil
Structure of NADH-cytochrome b5 reductase refined with the multipolar atomic model at 0.78A
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, NADH-cytochrome b5 reductase 3
著者Takaba, K, Takeda, K, Miki, K.
登録日2016-09-03
公開日2017-04-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.78 Å)
主引用文献Distribution of valence electrons of the flavin cofactor in NADH-cytochrome b5 reductase.
Sci Rep, 7, 2017
5GV7
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BU of 5gv7 by Molmil
Structure of NADH-cytochrome b5 reductase refined with the multipolar atomic model at 0.80 A
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, NADH-cytochrome b5 reductase 3
著者Takaba, K, Takeda, K, Miki, K.
登録日2016-09-03
公開日2017-04-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.8 Å)
主引用文献Distribution of valence electrons of the flavin cofactor in NADH-cytochrome b5 reductase.
Sci Rep, 7, 2017
6JGJ
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BU of 6jgj by Molmil
Crystal structure of the F99S/M153T/V163A/E222Q variant of GFP at 0.78 A
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Takaba, K, Tai, Y, Hanazono, Y, Miki, K, Takeda, K.
登録日2019-02-14
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.78 Å)
主引用文献Subatomic resolution X-ray structures of green fluorescent protein.
Iucrj, 6, 2019
7VI4
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BU of 7vi4 by Molmil
Electron crystallographic structure of TIA-1 prion-like domain, A381T mutant
分子名称: TIA-1 prion-like domain
著者Takaba, K, Maki-Yonekura, S, Sekiyama, N, Imamura, K, Kodama, T, Tochio, H, Yonekura, K.
登録日2021-09-24
公開日2022-09-28
最終更新日2024-06-19
実験手法ELECTRON CRYSTALLOGRAPHY (0.95 Å)
主引用文献ALS mutations in the TIA-1 prion-like domain trigger highly condensed pathogenic structures.
Proc.Natl.Acad.Sci.USA, 119, 2022
7VI5
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BU of 7vi5 by Molmil
Electron crystallographic structure of TIA-1 prion-like domain, wild type sequence
分子名称: TIA-1 prion-like domain
著者Takaba, K, Maki-Yonekura, S, Sekiyama, N, Imamura, K, Kodama, T, Tochio, H, Yonekura, K.
登録日2021-09-24
公開日2022-09-28
最終更新日2023-11-29
実験手法ELECTRON CRYSTALLOGRAPHY (1.761 Å)
主引用文献ALS mutations in the TIA-1 prion-like domain trigger highly condensed pathogenic structures.
Proc.Natl.Acad.Sci.USA, 119, 2022
6JGH
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BU of 6jgh by Molmil
Crystal structure of the F99S/M153T/V163A/T203I variant of GFP at 0.94 A
分子名称: CHLORIDE ION, Green fluorescent protein
著者Eki, H, Tai, Y, Takaba, K, Hanazono, Y, Miki, K, Takeda, K.
登録日2019-02-14
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.94 Å)
主引用文献Subatomic resolution X-ray structures of green fluorescent protein.
Iucrj, 6, 2019
6JGI
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BU of 6jgi by Molmil
Crystal structure of the S65T/F99S/M153T/V163A variant of GFP at 0.85 A
分子名称: Green fluorescent protein
著者Tai, Y, Takaba, K, Hanazono, Y, Miki, K, Takeda, K.
登録日2019-02-14
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献Subatomic resolution X-ray structures of green fluorescent protein.
Iucrj, 6, 2019
8J5A
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BU of 8j5a by Molmil
Single-particle cryo-EM structure of mouse apoferritin at 1.19 Angstrom resolution (Dataset A)
分子名称: Ferritin heavy chain, SODIUM ION
著者Kawakami, K, Maki-Yonekura, S, Hamaguchi, T, Takaba, K, Yonekura, K.
登録日2023-04-21
公開日2023-07-12
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (1.19 Å)
主引用文献Measurement of charges and chemical bonding in a cryo-EM structure.
Commun Chem, 6, 2023
6KKZ
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BU of 6kkz by Molmil
Crystal structure of the S65T/F99S/M153T/V163A variant of perdeuterated GFP at pD 8.5
分子名称: Green fluorescent protein
著者Tai, Y, Takaba, K, Hanazono, Y, Dao, H.A, Miki, K, Takeda, K.
登録日2019-07-28
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献X-ray crystallographic studies on the hydrogen isotope effects of green fluorescent protein at sub-angstrom resolutions
Acta Crystallogr.,Sect.D, 75, 2019
6KL1
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BU of 6kl1 by Molmil
Crystal structure of the S65T/F99S/M153T/V163A variant of non-deuterated GFP at pD 8.5
分子名称: Green fluorescent protein
著者Tai, Y, Takaba, K, Hanazono, Y, Dao, H.A, Miki, K, Takeda, K.
登録日2019-07-28
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.851 Å)
主引用文献X-ray crystallographic studies on the hydrogen isotope effects of green fluorescent protein at sub-angstrom resolutions
Acta Crystallogr.,Sect.D, 75, 2019
6KL0
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BU of 6kl0 by Molmil
Crystal structure of the S65T/F99S/M153T/V163A variant of perdeuterated GFP at pD 7.0
分子名称: Green fluorescent protein
著者Tai, Y, Takaba, K, Hanazono, Y, Miki, K, Takeda, K.
登録日2019-07-28
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.798 Å)
主引用文献X-ray crystallographic studies on the hydrogen isotope effects of green fluorescent protein at sub-angstrom resolutions
Acta Crystallogr.,Sect.D, 75, 2019
3W5H
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BU of 3w5h by Molmil
Ultra-high resolution structure of NADH-cytochrome b5 reductase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, NADH-cytochrome b5 reductase 3
著者Takeda, K, Ohno, H, Kosugi, M, Takaba, K, Miki, K.
登録日2013-01-30
公開日2013-07-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (0.78 Å)
主引用文献Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer
J.Mol.Biol., 425, 2013
3W2H
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BU of 3w2h by Molmil
Crystal structure of oxidation intermediate (1min) of NADH-cytochrome b5 reductase from pig liver
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K.
登録日2012-11-28
公開日2013-07-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.752 Å)
主引用文献Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer
J.Mol.Biol., 425, 2013
3W2I
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BU of 3w2i by Molmil
Crystal structure of re-oxidized form (60 min) of NADH-cytochrome b5 reductase from pig liver
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K.
登録日2012-11-28
公開日2013-07-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer
J.Mol.Biol., 425, 2013
3W2E
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BU of 3w2e by Molmil
Crystal structure of oxidation intermediate (20 min) of NADH-cytochrome b5 reductase from pig liver
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K.
登録日2012-11-28
公開日2013-07-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer
J.Mol.Biol., 425, 2013
3W2F
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BU of 3w2f by Molmil
Crystal structure of oxidation intermediate (10 min) of NADH-cytochrome b5 reductase from pig liver
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K.
登録日2012-11-28
公開日2013-07-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer
J.Mol.Biol., 425, 2013
3W2G
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BU of 3w2g by Molmil
Crystal structure of fully reduced form of NADH-cytochrome b5 reductase from pig liver
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADH-cytochrome b5 reductase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yamada, M, Tamada, T, Matsumoto, F, Shoyama, Y, Kimura, S, Kuroki, R, Miki, K.
登録日2012-11-28
公開日2013-07-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Elucidations of the catalytic cycle of NADH-cytochrome b5 reductase by X-ray crystallography: new insights into regulation of efficient electron transfer
J.Mol.Biol., 425, 2013

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