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BU of 5ix7 by Molmil

Crystal structure of metallo-DNA nanowire with infinite one-dimensional silver array
分子名称:	DNA (5'-D(GPGPAPCPTP(CBR)PGPAPCPTPCPC)-3'), POTASSIUM ION, SILVER ION
著者	Kondo, J, Tada, Y, Dairaku, T, Hattori, Y, Saneyoshi, H, Ono, A, Tanaka, Y.
登録日	2016-03-23
公開日	2017-07-05
最終更新日	2024-03-20
実験手法	X-RAY DIFFRACTION (1.398 Å)
主引用文献	A metallo-DNA nanowire with uninterrupted one-dimensional silver array Nat Chem, 9, 2017

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BU of 5ay4 by Molmil

Crystal structure of RNA duplex containing C-C base pairs obtained in the presence of Hg(II)
分子名称:	RNA (5'-R(GPGPAPCPUP(CBR)PGPAPCPUPCPC)-3'), SODIUM ION
著者	Kondo, J, Tada, Y, Dairaku, T, Saneyoshi, H, Okamoto, I, Tanaka, Y, Ono, A.
登録日	2015-08-06
公開日	2015-10-21
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.7 Å)
主引用文献	High-Resolution Crystal Structure of a Silver(I)-RNA Hybrid Duplex Containing Watson-Crick-like CSilver(I)C Metallo-Base Pairs Angew.Chem.Int.Ed.Engl., 54, 2015

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BU of 5ay2 by Molmil

Crystal structure of RNA duplex containing C-Ag(I)-C base pairs
分子名称:	RNA (5'-R(GPGPAPCPUP(CBR)PGPAPCPUPCPC)-3'), SILVER ION
著者	Kondo, J, Tada, Y, Dairaku, T, Saneyoshi, H, Okamoto, I, Tanaka, Y, Ono, A.
登録日	2015-08-06
公開日	2015-10-21
最終更新日	2024-03-20
実験手法	X-RAY DIFFRACTION (1.3 Å)
主引用文献	High-Resolution Crystal Structure of a Silver(I)-RNA Hybrid Duplex Containing Watson-Crick-like CSilver(I)C Metallo-Base Pairs Angew.Chem.Int.Ed.Engl., 54, 2015

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BU of 5ay3 by Molmil

Crystal structure of RNA duplex containing C-C base pairs
分子名称:	RNA (5'-R(GPGPAPCPUP(CBR)PGPACPUPCPC)-3')
著者	Kondo, J, Tada, Y, Dairaku, T, Saneyoshi, H, Okamoto, I, Tanaka, Y, Ono, A.
登録日	2015-08-06
公開日	2015-10-21
最終更新日	2024-03-20
実験手法	X-RAY DIFFRACTION (1.2 Å)
主引用文献	High-Resolution Crystal Structure of a Silver(I)-RNA Hybrid Duplex Containing Watson-Crick-like CSilver(I)C Metallo-Base Pairs Angew.Chem.Int.Ed.Engl., 54, 2015

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BU of 7eay by Molmil

DNA containing Cu(II)-mediated 4-N-carboxymethylcytosine base pairs
分子名称:	COBALT (II) ION, COBALT HEXAMMINE(III), COPPER (II) ION, ...
著者	Kondo, J, Terashima, A, Yoshimura, A, Tada, Y, Ono, A.
登録日	2021-03-08
公開日	2022-03-09
最終更新日	2024-05-29
実験手法	X-RAY DIFFRACTION (2.5 Å)
主引用文献	DNA containing Cu(II)-mediated 4-N-carboxymethylcytosine base pairs To Be Published

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BU of 7edt by Molmil

RNA duplex containing CC mispairs
分子名称:	RNA (5'-R(GPGPAPCPUPCPCPGPGP(5BU)PCPC)-3'), SODIUM ION, SPERMINE
著者	Kondo, J, Tada, Y.
登録日	2021-03-17
公開日	2022-03-23
最終更新日	2024-04-03
実験手法	X-RAY DIFFRACTION (1.2 Å)
主引用文献	RNA duplex containing CC mispairs To Be Published

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BU of 4yn5 by Molmil

Catalytic domain of Bacillus sp. JAMB-750 GH26 Endo-beta-1,4-mannanase
分子名称:	CACODYLATE ION, Mannan endo-1,4-beta-mannosidase
著者	Shimane, Y, Ohta, Y, Usami, R, Hatada, Y.
登録日	2015-03-09
公開日	2016-03-09
最終更新日	2024-03-20
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Crystal structure of Bacillus sp. JAMB-750 GH26 Endo-beta-1,4-mannanase To Be Published

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BU of 1wky by Molmil

Crystal structure of alkaline mannanase from Bacillus sp. strain JAMB-602: catalytic domain and its Carbohydrate Binding Module
分子名称:	CALCIUM ION, CHLORIDE ION, SODIUM ION, ...
著者	Akita, M, Takeda, N, Hirasawa, K, Sakai, H, Kawamoto, M, Yamamoto, M, Grant, W.D, Hatada, Y, Ito, S, Horikoshi, K.
登録日	2004-06-15
公開日	2005-06-15
最終更新日	2023-10-25
実験手法	X-RAY DIFFRACTION (1.65 Å)
主引用文献	Crystallization and preliminary X-ray study of alkaline mannanase from an alkaliphilic Bacillus isolate. Acta Crystallogr.,Sect.D, 60, 2004

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BU of 3vss by Molmil

Microbacterium saccharophilum K-1 beta-fructofuranosidase catalytic domain complexed with fructose
分子名称:	Beta-fructofuranosidase, beta-D-fructofuranose
著者	Tonozuka, T, Tamaki, A, Yokoi, G, Miyazaki, T, Ichikawa, M, Nishikawa, A, Ohta, Y, Hidaka, Y, Katayama, K, Hatada, Y, Ito, T, Fujita, K.
登録日	2012-05-08
公開日	2012-08-22
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.97 Å)
主引用文献	Crystal structure of a lactosucrose-producing enzyme, Arthrobacter sp. K-1 beta-fructofuranosidase Enzyme.Microb.Technol., 51, 2012

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BU of 3vsr by Molmil

Microbacterium saccharophilum K-1 beta-fructofuranosidase catalytic domain
分子名称:	Beta-fructofuranosidase
著者	Tonozuka, T, Tamaki, A, Yokoi, G, Miyazaki, T, Ichikawa, M, Nishikawa, A, Ohta, Y, Hidaka, Y, Katayama, K, Hatada, Y, Ito, T, Fujita, K.
登録日	2012-05-08
公開日	2012-08-22
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Crystal structure of a lactosucrose-producing enzyme, Arthrobacter sp. K-1 beta-fructofuranosidase Enzyme.Microb.Technol., 51, 2012

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BU of 3wz1 by Molmil

Catalytic domain of beta-agarase from Microbulbifer thermotolerans JAMB-A94
分子名称:	Agarase, GLYCEROL, SODIUM ION
著者	Takagi, E, Hatada, Y, Akita, M, Ohta, Y, Yokoi, G, Miyazaki, T, Nishikawa, A, Tonozuka, T.
登録日	2014-09-12
公開日	2014-11-19
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.6 Å)
主引用文献	Crystal structure of the catalytic domain of a GH16 beta-agarase from a deep-sea bacterium, Microbulbifer thermotolerans JAMB-A94 Biosci.Biotechnol.Biochem., 79, 2015

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BU of 3umw by Molmil

Crystal structure of Pim1 kinase in complex with inhibitor (Z)-2-[(1H-indazol-3-yl)methylene]-6-methoxy-7-(piperazin-1-ylmethyl)benzofuran-3(2H)-one
分子名称:	(2Z)-2-(1H-indazol-3-ylmethylidene)-6-methoxy-7-(piperazin-1-ylmethyl)-1-benzofuran-3(2H)-one, GLYCEROL, Proto-oncogene serine/threonine-protein kinase pim-1, ...
著者	Parker, L.J, Handa, N, Yokoyama, S.
登録日	2011-11-14
公開日	2012-10-03
最終更新日	2023-11-01
実験手法	X-RAY DIFFRACTION (2.08 Å)
主引用文献	Rational evolution of a novel type of potent and selective proviral integration site in Moloney murine leukemia virus kinase 1 (PIM1) inhibitor from a screening-hit compound. J.Med.Chem., 55, 2012

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BU of 4zy3 by Molmil

Crystal Structure of Keap1 in Complex with a small chemical compound, K67
分子名称:	FORMIC ACID, Kelch-like ECH-associated protein 1, N,N'-[2-(2-oxopropyl)naphthalene-1,4-diyl]bis(4-ethoxybenzenesulfonamide)
著者	Fukutomi, T, Iso, T, Suzuki, T, Takagi, K, Mizushima, T, Komatsu, M, Yamamoto, M.
登録日	2015-05-21
公開日	2016-05-25
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	p62/Sqstm1 promotes malignancy of HCV-positive hepatocellular carcinoma through Nrf2-dependent metabolic reprogramming Nat Commun, 7, 2016

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BU of 1cvz by Molmil

CRYSTAL STRUCTURE ANALYSIS OF PAPAIN WITH CLIK148(CATHEPSIN L SPECIFIC INHIBITOR)
分子名称:	N1-(1-DIMETHYLCARBAMOYL-2-PHENYL-ETHYL)-2-OXO-N4-(2-PYRIDIN-2-YL-ETHYL)-SUCCINAMIDE, PAPAIN
著者	Tsuge, H.
登録日	1999-08-24
公開日	2000-08-30
最終更新日	2022-12-21
実験手法	X-RAY DIFFRACTION (1.7 Å)
主引用文献	Inhibition mechanism of cathepsin L-specific inhibitors based on the crystal structure of papain-CLIK148 complex. Biochem.Biophys.Res.Commun., 266, 1999

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BU of 3wpu by Molmil

Full-length beta-fructofuranosidase from Microbacterium saccharophilum K-1
分子名称:	Beta-fructofuranosidase, GLYCEROL
著者	Yokoi, G, Mori, M, Sato, S, Miyazaki, T, Nishikawa, A, Tonozuka, T.
登録日	2014-01-17
公開日	2014-03-12
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.6 Å)
主引用文献	Enhancing thermostability and the structural characterization of Microbacterium saccharophilum K-1 beta-fructofuranosidase Appl.Microbiol.Biotechnol., 98, 2014

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BU of 3wpv by Molmil

Microbacterium saccharophilum K-1 beta-fructofuranosidase mutant T47S/F447V/F470Y/P500S
分子名称:	Beta-fructofuranosidase, GLYCEROL
著者	Yokoi, G, Mori, M, Sato, S, Miyazaki, T, Nishikawa, A, Tonozuka, T.
登録日	2014-01-17
公開日	2014-03-12
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.81 Å)
主引用文献	Enhancing thermostability and the structural characterization of Microbacterium saccharophilum K-1 beta-fructofuranosidase Appl.Microbiol.Biotechnol., 98, 2014

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BU of 3wpy by Molmil

Microbacterium saccharophilum K-1 beta-fructofuranosidase mutant T47S/S200T/F447V/P500S
分子名称:	Beta-fructofuranosidase
著者	Yokoi, G, Mori, M, Sato, S, Miyazaki, T, Nishikawa, A, Tonozuka, T.
登録日	2014-01-17
公開日	2014-03-12
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Enhancing thermostability and the structural characterization of Microbacterium saccharophilum K-1 beta-fructofuranosidase Appl.Microbiol.Biotechnol., 98, 2014

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BU of 3wpz by Molmil

Microbacterium saccharophilum K-1 beta-fructofuranosidase mutant T47S/S200T/F447P/F470Y/P500S
分子名称:	Beta-fructofuranosidase
著者	Yokoi, G, Mori, M, Sato, S, Miyazaki, T, Nishikawa, A, Tonozuka, T.
登録日	2014-01-17
公開日	2014-03-12
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2.27 Å)
主引用文献	Enhancing thermostability and the structural characterization of Microbacterium saccharophilum K-1 beta-fructofuranosidase Appl.Microbiol.Biotechnol., 98, 2014

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BU of 2ze0 by Molmil

Alpha-glucosidase GSJ
分子名称:	Alpha-glucosidase, CALCIUM ION
著者	Shirai, T, Hung, V.S, Morinaka, K, Kobayashi, T, Ito, S.
登録日	2007-12-04
公開日	2007-12-18
最終更新日	2023-11-01
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Crystal structure of GH13 alpha-glucosidase GSJ from one of the deepest sea bacteria Proteins, 73, 2008

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