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1EW1
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BU of 1ew1 by Molmil
RECA PROTEIN-BOUND SINGLE-STRANDED DNA
分子名称: DNA (5'-D(*TP*AP*CP*G)-3')
著者Nishinaka, T, Ito, Y, Yokoyama, S, Shibata, T.
登録日2000-04-21
公開日2000-05-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献An extended DNA structure through deoxyribose-base stacking induced by RecA protein.
Proc.Natl.Acad.Sci.USA, 94, 1997
3VH6
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BU of 3vh6 by Molmil
Crystal structure of the chicken CENP-T histone fold/CENP-W/CENP-S/CENP-X heterotetrameric complex, crystal form II
分子名称: CENP-S, CENP-T, CENP-W, ...
著者Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
登録日2011-08-23
公開日2012-03-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.351 Å)
主引用文献CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold
Cell(Cambridge,Mass.), 148, 2012
3VH5
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BU of 3vh5 by Molmil
Crystal structure of the chicken CENP-T histone fold/CENP-W/CENP-S/CENP-X heterotetrameric complex, crystal form I
分子名称: CENP-S, CENP-T, CENP-W, ...
著者Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
登録日2011-08-23
公開日2012-03-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold
Cell(Cambridge,Mass.), 148, 2012
4YTZ
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BU of 4ytz by Molmil
Rat xanthine oxidoreductase, C-terminal deletion protein variant, crystal grown without dithiothreitol
分子名称: BICARBONATE ION, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Nishino, T, Okamoto, K, Kawaguchi, Y, Matsumura, T, Eger, B.T, Pai, E.F, Nishino, T.
登録日2015-03-18
公開日2015-04-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The C-terminal peptide plays a role in the formation of an intermediate form during the transition between xanthine dehydrogenase and xanthine oxidase
Febs J., 282, 2015
1D8L
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BU of 1d8l by Molmil
E. COLI HOLLIDAY JUNCTION BINDING PROTEIN RUVA NH2 REGION LACKING DOMAIN III
分子名称: PROTEIN (HOLLIDAY JUNCTION DNA HELICASE RUVA)
著者Nishino, T, Iwasaki, H, Kataoka, M, Ariyoshi, M, Fujita, T, Shinagawa, H, Morikawa, K.
登録日1999-10-25
公開日2000-05-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Modulation of RuvB function by the mobile domain III of the Holliday junction recognition protein RuvA.
J.Mol.Biol., 298, 2000
4YTY
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BU of 4yty by Molmil
Structure of rat xanthine oxidoreductase, C535A/C992R/C1324S, NADH bound form
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, BICARBONATE ION, CALCIUM ION, ...
著者Nishino, T, Okamoto, K, Kawaguchi, Y, Matsumura, T, Eger, B.T, Pai, E.F.
登録日2015-03-18
公開日2015-04-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The C-terminal peptide plays a role in the formation of an intermediate form during the transition between xanthine dehydrogenase and xanthine oxidase.
Febs J., 282, 2015
4YSW
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BU of 4ysw by Molmil
Structure of rat xanthine oxidoreductase, C-terminal deletion protein variant, NADH bound form
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, BICARBONATE ION, CALCIUM ION, ...
著者Nishino, T, Okamoto, K, Kawaguchi, Y, Matsumura, T, Eger, B.T, Pai, E.F.
登録日2015-03-17
公開日2015-04-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献The C-terminal peptide plays a role in the formation of an intermediate form during the transition between xanthine dehydrogenase and xanthine oxidase.
Febs J., 282, 2015
1WYG
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BU of 1wyg by Molmil
Crystal Structure of a Rat Xanthine Dehydrogenase Triple Mutant (C535A, C992R and C1324S)
分子名称: 2-HYDROXYBENZOIC ACID, ACETIC ACID, CALCIUM ION, ...
著者Nishino, T, Okamoto, K, Kawaguchi, Y, Hori, H, Matsumura, T, Eger, B.T, Pai, E.F, Nishino, T.
登録日2005-02-14
公開日2005-05-31
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Mechanism of the Conversion of Xanthine Dehydrogenase to Xanthine Oxidase: IDENTIFICATION OF THE TWO CYSTEINE DISULFIDE BONDS AND CRYSTAL STRUCTURE OF A NON-CONVERTIBLE RAT LIVER XANTHINE DEHYDROGENASE MUTANT
J.Biol.Chem., 280, 2005
1GEF
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BU of 1gef by Molmil
Crystal structure of the archaeal holliday junction resolvase HJC
分子名称: HOLLIDAY JUNCTION RESOLVASE, SULFATE ION
著者Nishino, T, Komori, K, Tsuchiya, D, Ishino, Y, Morikawa, K.
登録日2000-11-08
公開日2001-03-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the archaeal holliday junction resolvase Hjc and implications for DNA recognition.
Structure, 9, 2001
1HJP
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BU of 1hjp by Molmil
HOLLIDAY JUNCTION BINDING PROTEIN RUVA FROM E. COLI
分子名称: RUVA
著者Nishino, T, Ariyoshi, M, Iwasaki, H, Shinagawa, H, Morikawa, K.
登録日1997-08-21
公開日1998-02-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Functional Analyses of the Domain Structure in the Holliday Junction Binding Protein Ruva
Structure, 6, 1998
5B2G
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BU of 5b2g by Molmil
Crystal structure of human claudin-4 in complex with C-terminal fragment of Clostridium perfringens enterotoxin
分子名称: Endolysin,Claudin-4, Heat-labile enterotoxin B chain
著者Shinoda, T, Kimura-Someya, T, Shirouzu, M, Yokoyama, S.
登録日2016-01-15
公開日2016-10-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural basis for disruption of claudin assembly in tight junctions by an enterotoxin
Sci Rep, 6, 2016
3REC
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BU of 3rec by Molmil
ESCHERICHIA COLI RECA PROTEIN-BOUND DNA, NMR, 1 STRUCTURE
分子名称: DNA (5'-D(*TP*A)-3')
著者Nishinaka, T, Ito, Y, Yokoyama, S, Shibata, T.
登録日1997-04-17
公開日1997-10-22
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献An extended DNA structure through deoxyribose-base stacking induced by RecA protein.
Proc.Natl.Acad.Sci.USA, 94, 1997
1IPI
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BU of 1ipi by Molmil
CRYSTAL STRUCTURE OF THE ARCHAEAL HOLLIDAY JUNCTION RESOLVASE HJC FROM PYROCOCCUS FURIOSUS FORM II
分子名称: HOLLIDAY JUNCTION RESOLVASE
著者Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
登録日2001-05-15
公開日2001-11-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Dissection of the regional roles of the archaeal Holliday junction resolvase Hjc by structural and mutational analyses.
J.Biol.Chem., 276, 2001
1WP9
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BU of 1wp9 by Molmil
Crystal structure of Pyrococcus furiosus Hef helicase domain
分子名称: ATP-dependent RNA helicase, putative, PHOSPHATE ION
著者Nishino, T, Komori, K, Tsuchiya, D, Ishino, Y, Morikawa, K.
登録日2004-08-31
公開日2005-02-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structure and Functional Implications of Pyrococcus furiosus Hef Helicase Domain Involved in Branched DNA Processing
Structure, 13, 2005
1X2I
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BU of 1x2i by Molmil
Crystal Structure Of Archaeal Xpf/Mus81 Homolog, Hef From Pyrococcus Furiosus, Helix-hairpin-helix Domain
分子名称: Hef helicase/nuclease
著者Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
登録日2005-04-24
公開日2005-09-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural and Functional Analyses of an Archaeal XPF/Rad1/Mus81 Nuclease: Asymmetric DNA Binding and Cleavage Mechanisms
STRUCTURE, 13, 2005
1J25
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BU of 1j25 by Molmil
Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, Mn cocrystal
分子名称: ATP-dependent RNA helicase, putative, MANGANESE (II) ION
著者Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
登録日2002-12-25
公開日2003-04-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1J24
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BU of 1j24 by Molmil
Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, Ca cocrystal
分子名称: ATP-dependent RNA helicase, putative, CALCIUM ION
著者Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
登録日2002-12-25
公開日2003-04-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1J22
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BU of 1j22 by Molmil
Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, selenomet derivative
分子名称: ATP-dependent RNA helicase, putative
著者Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
登録日2002-12-25
公開日2003-04-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1J23
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BU of 1j23 by Molmil
Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain
分子名称: ATP-dependent RNA helicase, putative
著者Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
登録日2002-12-25
公開日2003-04-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
3VZ9
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BU of 3vz9 by Molmil
Crystal structure of the chicken Spc24-Spc25 globular domain
分子名称: Spc24 protein, Uncharacterized protein
著者Nishino, T, Fukagawa, T.
登録日2012-10-09
公開日2013-04-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献CENP-T provides a structural platform for outer kinetochore assembly
Embo J., 32, 2013
3VZA
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BU of 3vza by Molmil
Crystal structure of the chicken Spc24-Spc25 globular domain in complex with CENP-T peptide
分子名称: Centromere protein T, Spc24 protein, Uncharacterized protein
著者Nishino, T, Fukagawa, T.
登録日2012-10-09
公開日2013-04-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献CENP-T provides a structural platform for outer kinetochore assembly
Embo J., 32, 2013
4J12
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BU of 4j12 by Molmil
monomeric Fc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, human Fc fragment
著者Ishino, T, Wang, M, Mosyak, L, Tam, A, Duan, W, Svenson, K, Joyce, A, O'Hara, D, Lin, L, Somers, W, Kriz, R.
登録日2013-01-31
公開日2013-05-01
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Engineering a Monomeric Fc Domain Modality by N-Glycosylation for the Half-life Extension of Biotherapeutics.
J.Biol.Chem., 288, 2013
3B0C
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BU of 3b0c by Molmil
Crystal structure of the chicken CENP-T histone fold/CENP-W complex, crystal form I
分子名称: CITRIC ACID, Centromere protein T, Centromere protein W
著者Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
登録日2011-06-08
公開日2012-03-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold.
Cell(Cambridge,Mass.), 148, 2012
3B0B
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BU of 3b0b by Molmil
Crystal structure of the chicken CENP-S/CENP-X complex
分子名称: Centromere protein S, Centromere protein X
著者Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
登録日2011-06-08
公開日2012-03-07
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold.
Cell(Cambridge,Mass.), 148, 2012
3B0D
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BU of 3b0d by Molmil
Crystal structure of the chicken CENP-T histone fold/CENP-W complex, crystal form II
分子名称: CITRIC ACID, Centromere protein T, Centromere protein W
著者Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
登録日2011-06-08
公開日2012-03-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.197 Å)
主引用文献CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold.
Cell(Cambridge,Mass.), 148, 2012

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