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3CDJ
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BU of 3cdj by Molmil
Crystal structure of the E. coli KH/S1 domain truncated PNPase
分子名称: Polynucleotide phosphorylase
著者Shi, Z, Yang, W.Z, Lin-Chao, S, Chak, K.F, Yuan, H.S.
登録日2008-02-27
公開日2008-12-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of Escherichia coli PNPase: central channel residues are involved in processive RNA degradation.
Rna, 14, 2008
3CDI
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BU of 3cdi by Molmil
Crystal structure of E. coli PNPase
分子名称: Polynucleotide phosphorylase
著者Shi, Z, Yang, W.Z, Lin-Chao, S, Chak, K.F, Yuan, H.S.
登録日2008-02-27
公開日2008-12-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Escherichia coli PNPase: central channel residues are involved in processive RNA degradation.
Rna, 14, 2008
4N6J
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BU of 4n6j by Molmil
Crystal structure of human Striatin-3 coiled coil domain
分子名称: Striatin-3
著者Chen, C, Shi, Z, Zhou, Z.
登録日2013-10-13
公開日2014-02-26
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Striatins contain a noncanonical coiled coil that binds protein phosphatase 2A A subunit to form a 2:2 heterotetrameric core of striatin-interacting phosphatase and kinase (STRIPAK) complex.
J.Biol.Chem., 289, 2014
4LN0
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BU of 4ln0 by Molmil
Crystal structure of the VGLL4-TEAD4 complex
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Transcription cofactor vestigial-like protein 4, ...
著者Wang, H, Shi, Z, Zhou, Z.
登録日2013-07-11
公開日2014-02-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.896 Å)
主引用文献A Peptide Mimicking VGLL4 Function Acts as a YAP Antagonist Therapy against Gastric Cancer.
Cancer Cell, 25, 2014
3UDA
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BU of 3uda by Molmil
Crystal Structure Analysis of FGF1-Disaccharide(NI24) complex
分子名称: 2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-1-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid, Heparin-binding growth factor 1, PHOSPHATE ION
著者Hung, S.-C, Shi, Z.
登録日2011-10-27
公開日2012-11-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Divergent synthesis of 48 heparan sulfate-based disaccharides and probing the specific sugar-fibroblast growth factor-1 interaction
J.Am.Chem.Soc., 134, 2012
3UD9
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BU of 3ud9 by Molmil
Crystal Structure Analysis of FGF1-Disaccharide(NI23) complex
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-1-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid, Heparin-binding growth factor 1, PHOSPHATE ION
著者Hung, S.-C, Shi, Z.
登録日2011-10-27
公開日2012-11-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Divergent synthesis of 48 heparan sulfate-based disaccharides and probing the specific sugar-fibroblast growth factor-1 interaction
J.Am.Chem.Soc., 134, 2012
3UD7
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BU of 3ud7 by Molmil
Crystal Structure Analysis of FGF1-Disaccharide(NI21) complexes
分子名称: 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-1-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid, Heparin-binding growth factor 1, PHOSPHATE ION
著者Hung, S.-C, Shi, Z.
登録日2011-10-27
公開日2012-11-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Divergent synthesis of 48 heparan sulfate-based disaccharides and probing the specific sugar-fibroblast growth factor-1 interaction
J.Am.Chem.Soc., 134, 2012
3UD8
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BU of 3ud8 by Molmil
Crystal Structure Analysis of FGF1-Disaccharide(NI22) complex
分子名称: 2-deoxy-3-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-1-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid, Heparin-binding growth factor 1, PHOSPHATE ION
著者Hung, S.-C, Shi, Z.
登録日2011-10-27
公開日2012-11-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Divergent synthesis of 48 heparan sulfate-based disaccharides and probing the specific sugar-fibroblast growth factor-1 interaction
J.Am.Chem.Soc., 134, 2012
7VCU
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BU of 7vcu by Molmil
Human p97 double hexamer conformer I with D1-ATPgammaS and D2-ADP bound
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
登録日2021-09-04
公開日2022-03-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022
7VCT
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BU of 7vct by Molmil
Human p97 single hexamer conformer III with D1-ATPgammaS and D2-ADP bound
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
登録日2021-09-04
公開日2022-03-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022
7VCX
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BU of 7vcx by Molmil
Human p97 single hexamer conformer II with ATPgammaS bound
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
著者Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
登録日2021-09-04
公開日2022-03-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022
7VCS
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BU of 7vcs by Molmil
Human p97 double hexamer conformer II with ATPgammaS bound
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
著者Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
登録日2021-09-03
公開日2022-03-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022
7VCV
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BU of 7vcv by Molmil
Human p97 single hexamer conformer I with ATPgammaS bound
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
著者Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
登録日2021-09-04
公開日2022-03-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022
1ZNV
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BU of 1znv by Molmil
How a His-metal finger endonuclease ColE7 binds and cleaves DNA with a transition metal ion cofactor
分子名称: Colicin E7, Colicin E7 immunity protein, NICKEL (II) ION, ...
著者Doudeva, L.G, Huang, H, Hsia, K.C, Shi, Z, Li, C.L, Shen, Y, Yuan, H.S.
登録日2005-05-12
公開日2006-03-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structural analysis and metal-dependent stability and activity studies of the ColE7 endonuclease domain in complex with DNA/Zn2+ or inhibitor/Ni2+
Protein Sci., 15, 2006
2AXC
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BU of 2axc by Molmil
Crystal structure of ColE7 translocation domain
分子名称: Colicin E7, GLYCEROL, SULFATE ION
著者Cheng, Y.S, Shi, Z, Doudeva, L.G, Yang, W.Z, Chak, K.F, Yuan, H.S.
登録日2005-09-04
公開日2006-03-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献High-resolution crystal structure of a truncated ColE7 translocation domain: implications for colicin transport across membranes
J.Mol.Biol., 356, 2006
1ZNS
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BU of 1zns by Molmil
Crystal structure of N-ColE7/12-bp DNA/Zn complex
分子名称: 5'-D(*CP*GP*GP*GP*AP*TP*AP*TP*CP*CP*CP*G)-3', Colicin E7, ZINC ION
著者Doudeva, L.G, Huang, H, Hsia, K.C, Shi, Z, Li, C.L, Shen, Y, Yuan, H.S.
登録日2005-05-12
公開日2006-03-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structural analysis and metal-dependent stability and activity studies of the ColE7 endonuclease domain in complex with DNA/Zn2+ or inhibitor/Ni2+
Protein Sci., 15, 2006
4Z8M
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BU of 4z8m by Molmil
Crystal structure of the MAVS-TRAF6 complex
分子名称: Peptide from Mitochondrial antiviral-signaling protein, TNF receptor-associated factor 6
著者Shi, Z.B, Zhou, Z.
登録日2015-04-09
公開日2015-09-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural Insights into Mitochondrial Antiviral Signaling Protein (MAVS)-Tumor Necrosis Factor Receptor-associated Factor 6 (TRAF6) Signaling
J.Biol.Chem., 290, 2015
6WG6
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BU of 6wg6 by Molmil
Crystal structure of human SMC1-SMC3 hinge domain heterodimer in north-open conformation
分子名称: Structural maintenance of chromosomes protein, Structural maintenance of chromosomes protein 3, poly(dT)
著者Shi, Z.B, Yu, H.
登録日2020-04-04
公開日2020-05-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.54 Å)
主引用文献Cryo-EM structure of the human cohesin-NIPBL-DNA complex.
Science, 368, 2020
6WGE
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BU of 6wge by Molmil
Cryo-EM structure of human Cohesin-NIPBL-DNA complex without STAG1
分子名称: DNA (43-MER), Double-strand-break repair protein rad21 homolog, MAGNESIUM ION, ...
著者Shi, Z.B, Gao, H, Bai, X.C, Yu, H.
登録日2020-04-05
公開日2020-05-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structure of the human cohesin-NIPBL-DNA complex.
Science, 368, 2020
6WG3
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BU of 6wg3 by Molmil
Cryo-EM structure of human Cohesin-NIPBL-DNA complex
分子名称: Cohesin subunit SA-1, DNA (51-MER), Double-strand-break repair protein rad21 homolog, ...
著者Shi, Z.B, Gao, H, Bai, X.C, Yu, H.
登録日2020-04-04
公開日2020-05-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (5.3 Å)
主引用文献Cryo-EM structure of the human cohesin-NIPBL-DNA complex.
Science, 368, 2020
6WG4
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BU of 6wg4 by Molmil
Crystal structure of human SMC1-SMC3 hinge domain heterodimer in south-open conformation
分子名称: Structural maintenance of chromosomes protein, Structural maintenance of chromosomes protein 3
著者Shi, Z.B, Yu, H.
登録日2020-04-04
公開日2020-05-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Cryo-EM structure of the human cohesin-NIPBL-DNA complex.
Science, 368, 2020
4FZF
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BU of 4fzf by Molmil
Crystal structure of MST4-MO25 complex with DKI
分子名称: 5-AMINO-3-{[4-(AMINOSULFONYL)PHENYL]AMINO}-N-(2,6-DIFLUOROPHENYL)-1H-1,2,4-TRIAZOLE-1-CARBOTHIOAMIDE, Calcium-binding protein 39, Serine/threonine-protein kinase MST4
著者Shi, Z.B, Zhou, Z.C.
登録日2012-07-06
公開日2013-03-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.64 Å)
主引用文献Structure of the MST4 in Complex with MO25 Provides Insights into Its Activation Mechanism
Structure, 21, 2013
4FZD
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BU of 4fzd by Molmil
Crystal structure of MST4-MO25 complex with WSF motif
分子名称: C-terminal peptide from Serine/threonine-protein kinase MST4, Calcium-binding protein 39, GLYCEROL, ...
著者Shi, Z.B, Zhou, Z.C.
登録日2012-07-06
公開日2013-03-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structure of the MST4 in Complex with MO25 Provides Insights into Its Activation Mechanism
Structure, 21, 2013
4FZA
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BU of 4fza by Molmil
Crystal structure of MST4-MO25 complex
分子名称: Calcium-binding protein 39, GLYCEROL, Serine/threonine-protein kinase MST4
著者Shi, Z.B, Zhou, Z.C.
登録日2012-07-06
公開日2013-03-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structure of the MST4 in Complex with MO25 Provides Insights into Its Activation Mechanism
Structure, 21, 2013
7FAT
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BU of 7fat by Molmil
Structure Determination of the RBD-NB1A7
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, nb_1A7
著者Geng, Y, Shi, Z.Z, Li, X.Y, Wang, L, Sun, Z.C, Zhang, H.W, Chen, X.C.
登録日2021-07-07
公開日2022-05-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural basis of nanobodies neutralizing SARS-CoV-2 variants
Structure, 30, 2022

 

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