6EG7
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![BU of 6eg7 by Molmil](/molmil-images/mine/6eg7) | BbvCI B2 dimer with I3C clusters | 分子名称: | 1,2-ETHANEDIOL, 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, BbvCI endonuclease subunit 2, ... | 著者 | Shen, B.W, Stoddard, B.L. | 登録日 | 2018-08-19 | 公開日 | 2018-11-14 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Structure, subunit organization and behavior of the asymmetric Type IIT restriction endonuclease BbvCI. Nucleic Acids Res., 47, 2019
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6MAF
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![BU of 6maf by Molmil](/molmil-images/mine/6maf) | native BbvCI A2B2 tetramer at low resolution | 分子名称: | BbvCI endonuclease subunit 1, BbvCI endonuclease subunit 2 | 著者 | Shen, B.W, Stoddard, B.L. | 登録日 | 2018-08-27 | 公開日 | 2018-11-14 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (3.79 Å) | 主引用文献 | Structure, subunit organization and behavior of the asymmetric Type IIT restriction endonuclease BbvCI. Nucleic Acids Res., 47, 2019
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1OAT
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![BU of 1oat by Molmil](/molmil-images/mine/1oat) | |
3LDY
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![BU of 3ldy by Molmil](/molmil-images/mine/3ldy) | An extraordinary mechanism of DNA perturbation exhibited by the rare-cutting HNH restriction endonuclease PacI | 分子名称: | CALCIUM ION, DNA (5'-D(*GP*AP*GP*GP*CP*TP*TP*A)-3'), DNA (5'-D(P*AP*TP*TP*AP*AP*GP*CP*CP*TP*C)-3'), ... | 著者 | Shen, B.W, Heiter, D, Chan, S.-H, Xu, S.-Y, Wilson, G, Stoddard, B.L. | 登録日 | 2010-01-13 | 公開日 | 2010-04-21 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (1.97 Å) | 主引用文献 | Unusual target site disruption by the rare-cutting HNH restriction endonuclease PacI. Structure, 18, 2010
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1QVJ
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![BU of 1qvj by Molmil](/molmil-images/mine/1qvj) | structure of NUDT9 complexed with ribose-5-phosphate | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5-O-phosphono-beta-D-ribofuranose, ADP-ribose pyrophosphatase, ... | 著者 | Shen, B.W, Perraud, A.-L, Scharenberg, A.S, Stoddard, B.L. | 登録日 | 2003-08-27 | 公開日 | 2003-09-16 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.91 Å) | 主引用文献 | The crystal structure and mutational analysis of human NUDT9 J.Mol.Biol., 332, 2003
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5E67
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![BU of 5e67 by Molmil](/molmil-images/mine/5e67) | K103A/K262A double mutant of I-SmaMI | 分子名称: | 2-(2-METHOXYETHOXY)ETHANOL, 2-METHOXYETHANOL, DNA bottom strand, ... | 著者 | Shen, B.W, Stoddard, B. | 登録日 | 2015-10-09 | 公開日 | 2016-01-13 | 最終更新日 | 2024-03-06 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | The Structural Basis of Asymmetry in DNA Binding and Cleavage as Exhibited by the I-SmaMI LAGLIDADG Meganuclease. J.Mol.Biol., 428, 2016
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5E5O
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![BU of 5e5o by Molmil](/molmil-images/mine/5e5o) | |
8EMC
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![BU of 8emc by Molmil](/molmil-images/mine/8emc) | |
8EMH
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![BU of 8emh by Molmil](/molmil-images/mine/8emh) | |
3M7K
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![BU of 3m7k by Molmil](/molmil-images/mine/3m7k) | |
5E5P
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![BU of 5e5p by Molmil](/molmil-images/mine/5e5p) | Wild type I-SmaMI in the space group of C121 | 分子名称: | 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, I-SmaMI LAGLIDADG meganuclease | 著者 | Shen, B.W. | 登録日 | 2015-10-09 | 公開日 | 2016-01-13 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.65 Å) | 主引用文献 | The Structural Basis of Asymmetry in DNA Binding and Cleavage as Exhibited by the I-SmaMI LAGLIDADG Meganuclease. J.Mol.Biol., 428, 2016
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5E5S
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![BU of 5e5s by Molmil](/molmil-images/mine/5e5s) | I-SmaMI K103A mutant | 分子名称: | 2-(2-METHOXYETHOXY)ETHANOL, Bottom strand DNA, DNA (5'-D(P*CP*AP*GP*GP*TP*GP*TP*AP*CP*G)-3'), ... | 著者 | Shen, B.W. | 登録日 | 2015-10-09 | 公開日 | 2016-01-13 | 最終更新日 | 2023-09-27 | 実験手法 | X-RAY DIFFRACTION (2.29 Å) | 主引用文献 | The Structural Basis of Asymmetry in DNA Binding and Cleavage as Exhibited by the I-SmaMI LAGLIDADG Meganuclease. J.Mol.Biol., 428, 2016
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5TH3
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![BU of 5th3 by Molmil](/molmil-images/mine/5th3) | |
1Q33
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![BU of 1q33 by Molmil](/molmil-images/mine/1q33) | Crystal structure of human ADP-ribose pyrophosphatase NUDT9 | 分子名称: | ADP-ribose pyrophosphatase, SULFATE ION, beta-D-glucopyranose | 著者 | Shen, B.W, Perraud, A.L, Scharenberg, A, Stoddard, B.L. | 登録日 | 2003-07-28 | 公開日 | 2003-09-30 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (1.81 Å) | 主引用文献 | The Crystal Structure and Mutational Analysis of Human NUDT9 J.Mol.Biol., 332, 2003
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3S1S
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![BU of 3s1s by Molmil](/molmil-images/mine/3s1s) | Characterization and crystal structure of the type IIG restriction endonuclease BpuSI | 分子名称: | 1,2-ETHANEDIOL, IODIDE ION, MANGANESE (II) ION, ... | 著者 | Shen, B.W, Xu, D, Chan, S.-H, Zheng, Y, Zhu, Y, Xu, S.-Y, Stoddard, B.L. | 登録日 | 2011-05-16 | 公開日 | 2011-07-13 | 最終更新日 | 2011-10-19 | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | 主引用文献 | Characterization and crystal structure of the type IIG restriction endonuclease RM.BpuSI. Nucleic Acids Res., 39, 2011
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5TGQ
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![BU of 5tgq by Molmil](/molmil-images/mine/5tgq) | Restriction-modification system Type II R.SwaI, DNA free | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, CALCIUM ION, ... | 著者 | Shen, B.W, stoddard, B.L. | 登録日 | 2016-09-28 | 公開日 | 2016-12-21 | 最終更新日 | 2024-03-06 | 実験手法 | X-RAY DIFFRACTION (1.88 Å) | 主引用文献 | DNA recognition by the SwaI restriction endonuclease involves unusual distortion of an 8 base pair A:T-rich target. Nucleic Acids Res., 45, 2017
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5TGX
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1U3E
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![BU of 1u3e by Molmil](/molmil-images/mine/1u3e) | DNA binding and cleavage by the HNH homing endonuclease I-HmuI | 分子名称: | 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 36-MER, ... | 著者 | Shen, B.W, Landthaler, M, Shub, D.A, Stoddard, B.L. | 登録日 | 2004-07-21 | 公開日 | 2004-08-31 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (2.92 Å) | 主引用文献 | DNA Binding and Cleavage by the HNH Homing Endonuclease I-HmuI. J.Mol.Biol., 342, 2004
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1B0A
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![BU of 1b0a by Molmil](/molmil-images/mine/1b0a) | 5,10, METHYLENE-TETRAHYDROPHOLATE DEHYDROGENASE/CYCLOHYDROLASE FROM E COLI. | 分子名称: | PROTEIN (FOLD BIFUNCTIONAL PROTEIN) | 著者 | Shen, B.W, Dyer, D, Huang, J.-Y, D'Ari, L, Rabinowitz, J, Stoddard, B.L. | 登録日 | 1998-11-06 | 公開日 | 1999-06-29 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.56 Å) | 主引用文献 | The crystal structure of a bacterial, bifunctional 5,10 methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. Protein Sci., 8, 1999
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7LO5
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![BU of 7lo5 by Molmil](/molmil-images/mine/7lo5) | cryoEM structure DrdV-DNA complex | 分子名称: | CALCIUM ION, DNA (27-MER), DNA (28-MER), ... | 著者 | Shen, B.W, Stoddard, B.L. | 登録日 | 2021-02-09 | 公開日 | 2021-03-17 | 最終更新日 | 2024-03-06 | 実験手法 | ELECTRON MICROSCOPY (2.86 Å) | 主引用文献 | Coordination of phage genome degradation versus host genome protection by a bifunctional restriction-modification enzyme visualized by CryoEM. Structure, 29, 2021
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7LVV
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![BU of 7lvv by Molmil](/molmil-images/mine/7lvv) | cryoEM structure DrdV-DNA complex | 分子名称: | CALCIUM ION, DNA (27-MER), DNA (28-MER), ... | 著者 | Shen, B.W, Stoddard, B.L. | 登録日 | 2021-02-26 | 公開日 | 2021-03-17 | 最終更新日 | 2024-03-06 | 実験手法 | ELECTRON MICROSCOPY (3.25 Å) | 主引用文献 | Coordination of phage genome degradation versus host genome protection by a bifunctional restriction-modification enzyme visualized by CryoEM. Structure, 29, 2021
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6M9G
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![BU of 6m9g by Molmil](/molmil-images/mine/6m9g) | BbvCI B2 dimer with Ta6Br14 clusters | 分子名称: | 1,2-ETHANEDIOL, ACETATE ION, BROMIDE ION, ... | 著者 | Shen, B.W, Stoddard, B.L. | 登録日 | 2018-08-23 | 公開日 | 2018-11-14 | 最終更新日 | 2024-05-22 | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | 主引用文献 | Structure, subunit organization and behavior of the asymmetric Type IIT restriction endonuclease BbvCI. Nucleic Acids Res., 47, 2019
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6MAG
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![BU of 6mag by Molmil](/molmil-images/mine/6mag) | native BbvCI B2 dimer in space group C222 | 分子名称: | ACETATE ION, BbvCI endonuclease subunit 2, GLYCEROL, ... | 著者 | Shen, B.W, Stoddard, B.L. | 登録日 | 2018-08-27 | 公開日 | 2018-11-14 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (2.07 Å) | 主引用文献 | Structure, subunit organization and behavior of the asymmetric Type IIT restriction endonuclease BbvCI. Nucleic Acids Res., 47, 2019
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7RDR
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![BU of 7rdr by Molmil](/molmil-images/mine/7rdr) | |
5JSN
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![BU of 5jsn by Molmil](/molmil-images/mine/5jsn) | Bcl2-inhibitor complex | 分子名称: | Apoptosis regulator Bcl-2, Bcl2 inhibitor | 著者 | Shen, B.W, Stoddard, B.L. | 登録日 | 2016-05-09 | 公開日 | 2016-11-16 | 最終更新日 | 2024-03-06 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Computationally designed high specificity inhibitors delineate the roles of BCL2 family proteins in cancer. Elife, 5, 2016
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