Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4RQZ
DownloadVisualize
BU of 4rqz by Molmil
re-refinement of 1soz, Crystal Structure of DegS protease in complex with an activating peptide
分子名称: Protease degS, activating peptide
著者Sauer, R.T, Grant, R.A.
登録日2014-11-05
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
4RR0
DownloadVisualize
BU of 4rr0 by Molmil
re-refined 1vcw, CRYSTAL STRUCTURE OF DEGS AFTER BACKSOAKING THE ACTIVATING PEPTIDE
分子名称: Protease degS
著者Sauer, R.T, Grant, R.A.
登録日2014-11-05
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.054 Å)
主引用文献A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
4RQY
DownloadVisualize
BU of 4rqy by Molmil
RE-REFINED STRUCTURE OF 1TE0 - STRUCTURAL ANALYSIS of DEGS, A STRESS SENSOR OF THE BACTERIAL PERIPLASM
分子名称: PHOSPHATE ION, Protease degS
著者Sauer, R.T, Grant, R.A.
登録日2014-11-05
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.204 Å)
主引用文献A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
4RR1
DownloadVisualize
BU of 4rr1 by Molmil
re-refinement of entry 1sot, Crystal Structure of the DegS stress sensor
分子名称: NICKEL (II) ION, PHOSPHATE ION, Protease degS
著者Sauer, R.T, Grant, R.A.
登録日2014-11-05
公開日2015-03-11
最終更新日2015-03-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
3OU0
DownloadVisualize
BU of 3ou0 by Molmil
re-refined 3CS0
分子名称: Periplasmic serine endoprotease DegP, heptapeptide, pentapeptide
著者Sauer, R.T, Grant, R.A, Kim, S.
登録日2010-09-14
公開日2011-01-19
最終更新日2012-02-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Covalent Linkage of Distinct Substrate Degrons Controls Assembly and Disassembly of DegP Proteolytic Cages.
Cell(Cambridge,Mass.), 145, 2011
6BQC
DownloadVisualize
BU of 6bqc by Molmil
Cyclopropane fatty acid synthase from E. coli
分子名称: (1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE, CARBONATE ION, Cyclopropane-fatty-acyl-phospholipid synthase, ...
著者Hari, S.B, Grant, R.A, Sauer, R.T.
登録日2017-11-27
公開日2018-07-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.073 Å)
主引用文献Structural and Functional Analysis of E. coli Cyclopropane Fatty Acid Synthase.
Structure, 26, 2018
1TWB
DownloadVisualize
BU of 1twb by Molmil
SspB disulfide crosslinked to an ssrA degradation tag
分子名称: Stringent starvation protein B homolog, ssrA peptide
著者Bolon, D.N, Grant, R.A, Baker, T.A, Sauer, R.T.
登録日2004-06-30
公開日2004-11-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Nucleotide-Dependent Substrate Handoff from the SspB Adaptor to the AAA+ ClpXP Protease.
Mol.Cell, 16, 2004
1U9P
DownloadVisualize
BU of 1u9p by Molmil
Permuted single-chain Arc
分子名称: pArc
著者Tabtiang, R.K, Cezairliyan, B.O, Grant, R.A, Cochrane, J.C, Sauer, R.T.
登録日2004-08-10
公開日2005-02-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Consolidating critical binding determinants by noncyclic rearrangement of protein secondary structure
Proc.Natl.Acad.Sci.Usa, 102, 2005
7UIY
DownloadVisualize
BU of 7uiy by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIIa
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-10-26
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIW
DownloadVisualize
BU of 7uiw by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIb
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UJ0
DownloadVisualize
BU of 7uj0 by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIIb
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIZ
DownloadVisualize
BU of 7uiz by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIc
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIX
DownloadVisualize
BU of 7uix by Molmil
ClpAP complex bound to ClpS N-terminal extension, class I
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIV
DownloadVisualize
BU of 7uiv by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIa
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
1BDT
DownloadVisualize
BU of 1bdt by Molmil
WILD TYPE GENE-REGULATING PROTEIN ARC/DNA COMPLEX
分子名称: DNA (5'-D(*AP*AP*TP*GP*AP*TP*AP*GP*AP*AP*GP*CP*AP*CP*TP*CP*TP*AP*CP*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*GP*TP*AP*GP*AP*GP*TP*GP*CP*TP*TP*CP*TP*AP*TP*CP*AP*T)-3'), PROTEIN (GENE-REGULATING PROTEIN ARC)
著者Schilbach, J.F, Karzai, A.W, Raumann, B.E, Sauer, R.T.
登録日1998-05-11
公開日1999-02-16
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Origins of DNA-binding specificity: role of protein contacts with the DNA backbone.
Proc.Natl.Acad.Sci.USA, 96, 1999
7M1M
DownloadVisualize
BU of 7m1m by Molmil
Crystal structure of Pseudomonas aeruginosa ClpP1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ATP-dependent Clp protease proteolytic subunit
著者Mawla, G.D, Grant, R.A, Baker, T.A, Sauer, R.T.
登録日2021-03-13
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献ClpP1P2 peptidase activity promotes biofilm formation in Pseudomonas aeruginosa.
Mol.Microbiol., 115, 2021
7M1L
DownloadVisualize
BU of 7m1l by Molmil
Crystal structure of Pseudomonas aeruginosa ClpP2
分子名称: ATP-dependent Clp protease proteolytic subunit, PHOSPHATE ION
著者Hall, B.M, Grant, R.A, Baker, T.A, Sauer, R.T.
登録日2021-03-13
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献ClpP1P2 peptidase activity promotes biofilm formation in Pseudomonas aeruginosa.
Mol.Microbiol., 115, 2021
1YFN
DownloadVisualize
BU of 1yfn by Molmil
Versatile modes of peptide recognition by the AAA+ adaptor protein SspB- the crystal structure of a SspB-RseA complex
分子名称: Sigma-E factor negative regulatory protein, Stringent starvation protein B
著者Levchenko, I, Grant, R.A, Flynn, J.M, Sauer, R.T, Baker, T.A.
登録日2005-01-03
公開日2005-05-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Versatile modes of peptide recognition by the AAA+ adaptor protein SspB
Nat.Struct.Mol.Biol., 12, 2005
6WR2
DownloadVisualize
BU of 6wr2 by Molmil
ClpP and ClpX IGF loop in ClpX-ClpP complex bound to ssrA tagged GFP
分子名称: ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit
著者Fei, X, Sauer, R.T.
登録日2020-04-29
公開日2020-11-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Structural basis of ClpXP recognition and unfolding of ssrA-tagged substrates.
Elife, 9, 2020
6WRF
DownloadVisualize
BU of 6wrf by Molmil
ClpX-ClpP complex bound to GFP-ssrA, recognition complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
著者Fei, X, Sauer, R.T.
登録日2020-04-29
公開日2020-11-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Structural basis of ClpXP recognition and unfolding of ssrA-tagged substrates.
Elife, 9, 2020
6WSG
DownloadVisualize
BU of 6wsg by Molmil
ClpX-ClpP complex bound to ssrA-tagged GFP, intermediate complex
分子名称: ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, Green fluorescent protein, ...
著者Fei, X, Sauer, R.T.
登録日2020-04-30
公開日2020-11-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Structural basis of ClpXP recognition and unfolding of ssrA-tagged substrates.
Elife, 9, 2020
5TXR
DownloadVisualize
BU of 5txr by Molmil
Structure of ALAS from S. cerevisiae non-covalently bound to PLP cofactor
分子名称: 5-aminolevulinate synthase, mitochondrial, FORMIC ACID, ...
著者Brown, B.L, Grant, R.A, Kardon, J.R, Sauer, R.T, Baker, T.A.
登録日2016-11-17
公開日2018-03-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the Mitochondrial Aminolevulinic Acid Synthase, a Key Heme Biosynthetic Enzyme.
Structure, 26, 2018
5TXV
DownloadVisualize
BU of 5txv by Molmil
HslU P21 cell with 4 hexamers
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent protease ATPase subunit HslU
著者Grant, R.A, Chen, J, Glynn, S.E, Sauer, R.T.
登録日2016-11-17
公開日2017-03-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (7.086 Å)
主引用文献Covalently linked HslU hexamers support a probabilistic mechanism that links ATP hydrolysis to protein unfolding and translocation.
J. Biol. Chem., 292, 2017
5TXT
DownloadVisualize
BU of 5txt by Molmil
Structure of asymmetric apo/holo ALAS dimer from S. cerevisiae
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, 5-aminolevulinate synthase, mitochondrial, ...
著者Brown, B.L, Grant, R.A, Kardon, J.R, Sauer, R.T, Baker, T.A.
登録日2016-11-17
公開日2018-03-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the Mitochondrial Aminolevulinic Acid Synthase, a Key Heme Biosynthetic Enzyme.
Structure, 26, 2018
2HDD
DownloadVisualize
BU of 2hdd by Molmil
ENGRAILED HOMEODOMAIN Q50K VARIANT DNA COMPLEX
分子名称: DNA (5'-D(*AP*TP*CP*CP*GP*GP*GP*GP*AP*TP*TP*AP*CP*AP*TP*GP*G P*CP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*CP*CP*C P*CP*GP*GP*A)-3'), PROTEIN (ENGRAILED HOMEODOMAIN Q50K)
著者Tucker-Kellogg, L, Rould, M.A, Chambers, K.A, Ades, S.E, Sauer, R.T, Pabo, C.O.
登録日1998-02-10
公開日1998-05-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Engrailed (Gln50-->Lys) homeodomain-DNA complex at 1.9 A resolution: structural basis for enhanced affinity and altered specificity.
Structure, 5, 1997

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon