4R4P
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![BU of 4r4p by Molmil](/molmil-images/mine/4r4p) | Crystal Structure of the VS ribozyme-A756G mutant | 分子名称: | MAGNESIUM ION, VS ribozyme RNA | 著者 | Piccirilli, J.A, Suslov, N.B, Dasgupta, S, Huang, H, Lilley, D.M.J, Rice, P.A. | 登録日 | 2014-08-19 | 公開日 | 2015-09-30 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (3.07 Å) | 主引用文献 | Crystal structure of the Varkud satellite ribozyme. Nat.Chem.Biol., 11, 2015
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4R4V
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![BU of 4r4v by Molmil](/molmil-images/mine/4r4v) | Crystal structure of the VS ribozyme - G638A mutant | 分子名称: | MAGNESIUM ION, POTASSIUM ION, VS ribozyme RNA | 著者 | Piccirilli, J.A, Suslov, N.B, Dasgupta, S, Huang, H, Lilley, D.M.J, Rice, P.A. | 登録日 | 2014-08-19 | 公開日 | 2015-09-30 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (3.07 Å) | 主引用文献 | Crystal structure of the Varkud satellite ribozyme. Nat.Chem.Biol., 11, 2015
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8UTA
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![BU of 8uta by Molmil](/molmil-images/mine/8uta) | yjdF riboswitch from R. gauvreauii in complex with proflavine bound to Fab BL3-6 S97N | 分子名称: | Fab BL3-6 S97N heavy chain, Fab BL3-6 S97N light chain, MAGNESIUM ION, ... | 著者 | Krochmal, D, Lewicka, A, Piccirilli, J.A. | 登録日 | 2023-10-30 | 公開日 | 2024-04-10 | 最終更新日 | 2024-05-01 | 実験手法 | X-RAY DIFFRACTION (3.05 Å) | 主引用文献 | Structural basis for promiscuity in ligand recognition by yjdF riboswitch. Cell Discov, 10, 2024
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2R8S
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![BU of 2r8s by Molmil](/molmil-images/mine/2r8s) | High resolution structure of a specific synthetic FAB bound to P4-P6 RNA ribozyme domain | 分子名称: | Fab heavy chain, Fab light chain, MAGNESIUM ION, ... | 著者 | Ye, J.D, Tereshko, V, Sidhu, S.S, Koide, S, Kossiakoff, A.A, Piccirilli, J.A. | 登録日 | 2007-09-11 | 公開日 | 2007-12-04 | 最終更新日 | 2023-08-30 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Synthetic antibodies for specific recognition and crystallization of structured RNA Proc.Natl.Acad.Sci.Usa, 105, 2008
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8SH5
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![BU of 8sh5 by Molmil](/molmil-images/mine/8sh5) | Crystal structure of 3'cap-independent translation enhancers (CITE) from Pea enation mosaic virus RNA 2 (PEMV2) with Fab BL3-6K170A | 分子名称: | Fab BL3-6K170A heavy chain, Fab BL3-6K170A light chain, RNA (88-MER) | 著者 | Lewicka, A, Roman, C, Rice, P.A, Piccirilli, J.A. | 登録日 | 2023-04-13 | 公開日 | 2023-08-16 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (2.75 Å) | 主引用文献 | Crystal structure of a cap-independent translation enhancer RNA. Nucleic Acids Res., 51, 2023
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7SZU
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![BU of 7szu by Molmil](/molmil-images/mine/7szu) | |
7U0Y
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![BU of 7u0y by Molmil](/molmil-images/mine/7u0y) | |
3IVK
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![BU of 3ivk by Molmil](/molmil-images/mine/3ivk) | Crystal Structure of the Catalytic Core of an RNA Polymerase Ribozyme Complexed with an Antigen Binding Antibody Fragment | 分子名称: | CADMIUM ION, CHLORIDE ION, Fab heavy chain, ... | 著者 | Koldobskaya, Y, Duguid, E.M, Shechner, D.M, Koide, S, Kossiakoff, A.A, Bartel, D.P, Piccirilli, J.A. | 登録日 | 2009-09-01 | 公開日 | 2010-03-02 | 最終更新日 | 2017-11-01 | 実験手法 | X-RAY DIFFRACTION (3.1 Å) | 主引用文献 | Crystal structure of the catalytic core of an RNA-polymerase ribozyme. Science, 326, 2009
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8UIW
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![BU of 8uiw by Molmil](/molmil-images/mine/8uiw) | yjdF riboswitch from R. gauvreauii in complex with chelerythrine bound to Fab BL3-6 S97N | 分子名称: | 1,2-dimethoxy-12-methyl[1,3]benzodioxolo[5,6-c]phenanthridin-12-ium, Fab BL3-6 S97N heavy chain, Fab BL3-6 S97N light chain, ... | 著者 | Krochmal, D, Lewicka, A, Piccirilli, J.A. | 登録日 | 2023-10-10 | 公開日 | 2024-04-10 | 最終更新日 | 2024-05-01 | 実験手法 | X-RAY DIFFRACTION (2.77 Å) | 主引用文献 | Structural basis for promiscuity in ligand recognition by yjdF riboswitch. Cell Discov, 10, 2024
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6U8K
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![BU of 6u8k by Molmil](/molmil-images/mine/6u8k) | Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV3 | 分子名称: | Heavy chain of Fab HCV3, JIIIabc RNA (68-MER), Light chain of Fab HCV3 | 著者 | Koirala, D, Lewicka, A, Koldobskaya, Y, Huang, H, Piccirilli, J.A. | 登録日 | 2019-09-05 | 公開日 | 2019-12-04 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (2.75 Å) | 主引用文献 | Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits Translation. Acs Chem.Biol., 15, 2020
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2KZM
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![BU of 2kzm by Molmil](/molmil-images/mine/2kzm) | KLENOW FRAGMENT WITH NORMAL SUBSTRATE AND ZINC AND MANGANESE | 分子名称: | DNA (5'-D(*GP*CP*TP*TP*A*CP*GP*C)-3'), MANGANESE (II) ION, PROTEIN (DNA POLYMERASE I), ... | 著者 | Brautigam, C.A, Sun, S, Piccirilli, J.A, Steitz, T.A. | 登録日 | 1998-07-03 | 公開日 | 1999-02-16 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli. Biochemistry, 38, 1999
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6XJQ
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![BU of 6xjq by Molmil](/molmil-images/mine/6xjq) | Crystal structure of a self-alkylating ribozyme - alkylated form with biotinylated epoxide substrate | 分子名称: | 2-{[(4R)-4-hydroxyhexyl]oxy}ethyl 5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoate, Fab HAVx Heavy Chain, Fab HAVx Light Chain, ... | 著者 | Koirala, D, Piccirilli, J.A. | 登録日 | 2020-06-24 | 公開日 | 2022-01-19 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.708 Å) | 主引用文献 | Structural basis for substrate binding and catalysis by a self-alkylating ribozyme. Nat.Chem.Biol., 18, 2022
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6XJW
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![BU of 6xjw by Molmil](/molmil-images/mine/6xjw) | |
6U8D
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![BU of 6u8d by Molmil](/molmil-images/mine/6u8d) | Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV2 | 分子名称: | Heavy chain of Fab HCV2, JIIIabc RNA (68-MER), Light chain of Fab HCV2 | 著者 | Koirala, D, Lewicka, A, Koldobskaya, Y, Huang, H, Piccirilli, J.A. | 登録日 | 2019-09-04 | 公開日 | 2019-12-04 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.807 Å) | 主引用文献 | Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits Translation. Acs Chem.Biol., 15, 2020
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3OV6
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![BU of 3ov6 by Molmil](/molmil-images/mine/3ov6) | CD1c in complex with MPM (mannosyl-beta1-phosphomycoketide) | 分子名称: | 1-O-[(S)-hydroxy{[(4S,8S,16S,20S)-4,8,12,16,20-pentamethylheptacosyl]oxy}phosphoryl]-beta-D-mannopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, ... | 著者 | Scharf, L, Li, N.S, Hawk, A.J, Garzon, D, Zhang, T, Kazen, A.R, Shah, S, Haddadian, E.J, Saghatelian, A, Faraldo-Gomez, J.D, Meredith, S.C, Piccirilli, J.A, Adams, E.J. | 登録日 | 2010-09-15 | 公開日 | 2011-01-19 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.502 Å) | 主引用文献 | The 2.5 A structure of CD1c in complex with a mycobacterial lipid reveals an open groove ideally suited for diverse antigen presentation Immunity, 33, 2010
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5V3I
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![BU of 5v3i by Molmil](/molmil-images/mine/5v3i) | |
6XJY
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![BU of 6xjy by Molmil](/molmil-images/mine/6xjy) | |
6XJZ
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![BU of 6xjz by Molmil](/molmil-images/mine/6xjz) | |
7JRR
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![BU of 7jrr by Molmil](/molmil-images/mine/7jrr) | Crystal structures of artificially designed homomeric RNA nanoarchitectures | 分子名称: | MAGNESIUM ION, MANGANESE (II) ION, RNA (50-MER) | 著者 | Liu, D, Shao, Y, Piccirilli, J.A, Weizmann, Y. | 登録日 | 2020-08-12 | 公開日 | 2021-09-08 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.16 Å) | 主引用文献 | Structures of artificially designed discrete RNA nanoarchitectures at near-atomic resolution. Sci Adv, 7, 2021
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7JRS
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![BU of 7jrs by Molmil](/molmil-images/mine/7jrs) | |
7JRT
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![BU of 7jrt by Molmil](/molmil-images/mine/7jrt) | |
4KZE
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![BU of 4kze by Molmil](/molmil-images/mine/4kze) | Crystal structure of an RNA aptamer in complex with Fab | 分子名称: | BL3-6 Fab antibody, heavy chain, light chain, ... | 著者 | Huang, H, Suslov, N.B, Li, N, Koldobskaya, Y, Rice, P.A, Piccirilli, J.A. | 登録日 | 2013-05-29 | 公開日 | 2014-06-18 | 最終更新日 | 2014-07-30 | 実験手法 | X-RAY DIFFRACTION (2.404 Å) | 主引用文献 | A G-quadruplex-containing RNA activates fluorescence in a GFP-like fluorophore. Nat.Chem.Biol., 10, 2014
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4KZD
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![BU of 4kzd by Molmil](/molmil-images/mine/4kzd) | Crystal structure of an RNA aptamer in complex with fluorophore and Fab | 分子名称: | 4-(3,5-difluoro-4-hydroxybenzyl)-1,2-dimethyl-1H-imidazol-5-ol, BL3-6 Fab antibody, heavy chain, ... | 著者 | Huang, H, Suslov, N.B, Li, N, Koldobskaya, Y, Rice, P.A, Piccirilli, J.A. | 登録日 | 2013-05-29 | 公開日 | 2014-06-18 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (2.186 Å) | 主引用文献 | A G-quadruplex-containing RNA activates fluorescence in a GFP-like fluorophore. Nat.Chem.Biol., 10, 2014
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2KFZ
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![BU of 2kfz by Molmil](/molmil-images/mine/2kfz) | KLENOW FRAGMENT WITH BRIDGING-SULFUR SUBSTRATE AND ZINC ONLY | 分子名称: | 5'-D(*GP*CP*TP*TP*AP*(US1)P*G)-3', KLENOW FRAGMENT OF DNA POLYMERASE I, MAGNESIUM ION, ... | 著者 | Brautigam, C.A, Sun, S, Piccirilli, J.A, Steitz, T.A. | 登録日 | 1998-07-02 | 公開日 | 1998-11-11 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (2.03 Å) | 主引用文献 | Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli. Biochemistry, 38, 1999
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2KFN
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![BU of 2kfn by Molmil](/molmil-images/mine/2kfn) | KLENOW FRAGMENT WITH BRIDGING-SULFUR SUBSTRATE AND MANGANESE | 分子名称: | 5'-D(*GP*CP*TP*TP*AP*(US1)P*G)-3', KLENOW FRAGMENT OF DNA POLYMERASE I, MAGNESIUM ION, ... | 著者 | Brautigam, C.A, Sun, S, Piccirilli, J.A, Steitz, T.A. | 登録日 | 1998-07-01 | 公開日 | 1998-11-11 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (2.03 Å) | 主引用文献 | Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli. Biochemistry, 38, 1999
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