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1Y64
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BU of 1y64 by Molmil
Bni1p Formin Homology 2 Domain complexed with ATP-actin
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Otomo, T, Tomchick, D.R, Otomo, C, Panchal, S.C, Machius, M, Rosen, M.K.
登録日2004-12-03
公開日2005-01-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural basis of actin filament nucleation and processive capping by a formin homology 2 domain
Nature, 433, 2005
2BNX
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BU of 2bnx by Molmil
Crystal structure of the dimeric regulatory domain of mouse diaphaneous-related formin (DRF), mDia1
分子名称: CHLORIDE ION, DIAPHANOUS PROTEIN HOMOLOG 1
著者Otomo, T, Otomo, C, Tomchick, D.R, Machius, M, Rosen, M.K.
登録日2005-04-05
公開日2005-06-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis of Rho Gtpase-Mediated Activation of the Formin Mdia1
Mol.Cell, 18, 2005
1F2R
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BU of 1f2r by Molmil
NMR STRUCTURE OF THE HETERODIMERIC COMPLEX BETWEEN CAD DOMAINS OF CAD AND ICAD
分子名称: CASPASE-ACTIVATED DNASE, INHIBITOR OF CASPASE-ACTIVATED DNASE
著者Otomo, T, Sakahira, H, Uegaki, K, Nagata, S, Yamazaki, T.
登録日2000-05-29
公開日2000-06-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the heterodimeric complex between CAD domains of CAD and ICAD.
Nat.Struct.Biol., 7, 2000
3OBV
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BU of 3obv by Molmil
Autoinhibited Formin mDia1 Structure
分子名称: Protein diaphanous homolog 1, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
著者Tomchick, D.R, Rosen, M.K, Otomo, T.
登録日2010-08-09
公開日2010-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structure of the Formin mDia1 in autoinhibited conformation.
Plos One, 5, 2010
4NAW
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BU of 4naw by Molmil
Crystal Structure of Human ATG12~ATG5-ATG16N in complex with a fragment of ATG3
分子名称: Autophagy protein 5, Autophagy-related protein 16-1, SODIUM ION, ...
著者Metlagel, Z, Otomo, C, Takaesu, G, Otomo, T.
登録日2013-10-22
公開日2013-11-06
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.195 Å)
主引用文献Structural basis of ATG3 recognition by the autophagic ubiquitin-like protein ATG12.
Proc.Natl.Acad.Sci.USA, 110, 2013
4GDL
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BU of 4gdl by Molmil
Crystal Structure of Human Atg12~Atg5 Conjugate in Complex with an N-terminal Fragment of Atg16L1
分子名称: Autophagy protein 5, Autophagy-related protein 16-1, SODIUM ION, ...
著者Otomo, C, Metlagel, Z, Takaesu, G, Otomo, T.
登録日2012-07-31
公開日2012-12-05
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.875 Å)
主引用文献Structure of the human ATG12~ATG5 conjugate required for LC3 lipidation in autophagy.
Nat.Struct.Mol.Biol., 20, 2013
4GDK
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BU of 4gdk by Molmil
Crystal Structure of Human Atg12~Atg5 Conjugate in Complex with an N-terminal Fragment of Atg16L1
分子名称: Autophagy protein 5, Autophagy-related protein 16-1, SODIUM ION, ...
著者Otomo, C, Metlagel, Z, Takaesu, G, Otomo, T.
登録日2012-07-31
公開日2012-12-05
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the human ATG12~ATG5 conjugate required for LC3 lipidation in autophagy.
Nat.Struct.Mol.Biol., 20, 2013
7JLO
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BU of 7jlo by Molmil
Cryo-EM structure of human ATG9A in amphipols
分子名称: Autophagy-related protein 9A
著者Maeda, S, Otomo, T.
登録日2020-07-30
公開日2020-10-28
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure, lipid scrambling activity and role in autophagosome formation of ATG9A.
Nat.Struct.Mol.Biol., 27, 2020
7JLP
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BU of 7jlp by Molmil
cryo-EM structure of human ATG9A in nanodiscs
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Autophagy-related protein 9A
著者Maeda, S, Otomo, T.
登録日2020-07-30
公開日2020-10-28
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure, lipid scrambling activity and role in autophagosome formation of ATG9A.
Nat.Struct.Mol.Biol., 27, 2020
7T5P
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BU of 7t5p by Molmil
Cryo-EM structure of human SIMC1-SLF2 complex
分子名称: SMC5-SMC6 complex localization factor protein 2, SUMO-interacting motif-containing protein 1
著者Maeda, S, Oravcova, M, Boddy, M.N, Otomo, T.
登録日2021-12-13
公開日2022-12-07
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.
Elife, 11, 2022
7JLQ
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BU of 7jlq by Molmil
cryo-EM structure of human ATG9A in LMNG micelles
分子名称: Autophagy-related protein 9A
著者Maeda, S, Otomo, T.
登録日2020-07-30
公開日2020-10-28
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure, lipid scrambling activity and role in autophagosome formation of ATG9A.
Nat.Struct.Mol.Biol., 27, 2020
7ELG
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BU of 7elg by Molmil
LC3B modificated with a covalent probe
分子名称: 2-methylidene-5-thiophen-2-yl-cyclohexane-1,3-dione, Microtubule-associated proteins 1A/1B light chain 3B, SULFATE ION
著者Fan, S, Wan, W.
登録日2021-04-10
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Inhibition of Autophagy by a Small Molecule through Covalent Modification of the LC3 Protein.
Angew.Chem.Int.Ed.Engl., 60, 2021
1C9F
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BU of 1c9f by Molmil
NMR STRUCTURE OF THE CAD DOMAIN OF CASPASE-ACTIVATED DNASE
分子名称: CASPASE-ACTIVATED DNASE
著者Yamazaki, T, Uegaki, K.
登録日1999-08-02
公開日2000-02-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the CAD domain of caspase-activated DNase and interaction with the CAD domain of its inhibitor.
J.Mol.Biol., 297, 2000
7SWQ
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BU of 7swq by Molmil
Cryo-EM structure of Arabidopsis Ago10-guide-target RNA complex in a bent duplex conformation
分子名称: MAGNESIUM ION, Protein argonaute 10, RNA (5'-R(P*CP*CP*AP*UP*UP*GP*UP*CP*AP*CP*AP*CP*UP*CP*CP*AP*AP*A)-3'), ...
著者Xiao, Y, MacRae, I.J.
登録日2021-11-21
公開日2022-11-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.79 Å)
主引用文献Structural basis for RNA slicing by a plant Argonaute.
Nat.Struct.Mol.Biol., 30, 2023
7SVA
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BU of 7sva by Molmil
Cryo-EM structure of Arabidopsis Ago10-guide RNA complex
分子名称: MAGNESIUM ION, Protein argonaute 10, RNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*UP*U)-3')
著者Xiao, Y, MacRae, I.J.
登録日2021-11-18
公開日2022-11-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structural basis for RNA slicing by a plant Argonaute.
Nat.Struct.Mol.Biol., 30, 2023

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