8HAR
| SAH-bound C-Methyltransferase Fur6 from Streptomyces sp. KO-3988 | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Fur6, S-ADENOSYL-L-HOMOCYSTEINE | 著者 | Noguchi, T, Nagata, R, Tomita, T, Kuzuyama, T. | 登録日 | 2022-10-26 | 公開日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.12 Å) | 主引用文献 | Reductive biosynthesis of meroterpenoids via transient diazotization To Be Published
|
|
5ZZN
| Crystal structure of photosystem II from an SQDG-deficient mutant of Thermosynechococcus elongatus | 分子名称: | (3R)-beta,beta-caroten-3-ol, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... | 著者 | Nakajima, Y, Umena, Y, Nagao, R, Endo, K, Kobayashi, K, Akita, F, Suga, M, Wada, H, Noguchi, T, Shen, J.R. | 登録日 | 2018-06-03 | 公開日 | 2018-08-01 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Thylakoid membrane lipid sulfoquinovosyl-diacylglycerol (SQDG) is required for full functioning of photosystem II inThermosynechococcus elongatus. J. Biol. Chem., 293, 2018
|
|
2ZPF
| Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 18min at 293K | 分子名称: | FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ... | 著者 | Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M. | 登録日 | 2008-07-11 | 公開日 | 2008-10-21 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.482 Å) | 主引用文献 | Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile J.Biol.Chem., 283, 2008
|
|
2ZPE
| nitrosylated Fe-type nitrile hydratase with tert-butylisonitrile | 分子名称: | FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ... | 著者 | Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M. | 登録日 | 2008-07-10 | 公開日 | 2008-10-21 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.48 Å) | 主引用文献 | Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile J.Biol.Chem., 283, 2008
|
|
2ZPH
| Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 340min at 293K | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, MAGNESIUM ION, ... | 著者 | Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M. | 登録日 | 2008-07-11 | 公開日 | 2008-10-21 | 最終更新日 | 2024-10-09 | 実験手法 | X-RAY DIFFRACTION (1.59 Å) | 主引用文献 | Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile J.Biol.Chem., 283, 2008
|
|
2ZPB
| nitrosylated Fe-type nitrile hydratase | 分子名称: | FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ... | 著者 | Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M. | 登録日 | 2008-07-09 | 公開日 | 2008-10-21 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile J.Biol.Chem., 283, 2008
|
|
2ZPI
| Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 440min at 293K | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, MAGNESIUM ION, ... | 著者 | Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M. | 登録日 | 2008-07-11 | 公開日 | 2008-10-21 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.491 Å) | 主引用文献 | Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile J.Biol.Chem., 283, 2008
|
|
2ZPG
| Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 120min at 293K | 分子名称: | FE (III) ION, MAGNESIUM ION, Nitrile hydratase subunit alpha, ... | 著者 | Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M. | 登録日 | 2008-07-11 | 公開日 | 2008-10-21 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.39 Å) | 主引用文献 | Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile J.Biol.Chem., 283, 2008
|
|
5WS5
| Native XFEL structure of photosystem II (preflash dark dataset) | 分子名称: | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... | 著者 | Suga, M, Shen, J.R. | 登録日 | 2016-12-05 | 公開日 | 2017-03-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | 主引用文献 | Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL. Nature, 543, 2017
|
|
5GTH
| Native XFEL structure of photosystem II (dark dataset) | 分子名称: | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... | 著者 | Suga, M, Shen, J.R. | 登録日 | 2016-08-20 | 公開日 | 2017-03-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL. Nature, 543, 2017
|
|
5GTI
| Native XFEL structure of photosystem II (two flash dataset) | 分子名称: | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... | 著者 | Suga, M, Shen, J.R. | 登録日 | 2016-08-20 | 公開日 | 2017-03-15 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL. Nature, 543, 2017
|
|
5WS6
| Native XFEL structure of Photosystem II (preflash two-flash dataset | 分子名称: | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... | 著者 | Suga, M, Shen, J.R. | 登録日 | 2016-12-05 | 公開日 | 2017-03-15 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | 主引用文献 | Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL. Nature, 543, 2017
|
|
3X20
| Crystal structure of Nitrile Hydratase mutant bR56K complexed with Trimethylacetonitrile, photo-activated for 25 min | 分子名称: | 2,2-dimethylpropanenitrile, CHLORIDE ION, FE (III) ION, ... | 著者 | Yamanaka, Y, Hashimoto, K, Noguchi, N, Yohda, M, Odaka, M. | 登録日 | 2014-12-03 | 公開日 | 2016-01-27 | 実験手法 | X-RAY DIFFRACTION (1.18 Å) | 主引用文献 | Time-Resolved Crystallography of the Reaction Intermediate of Nitrile Hydratase: Revealing a Role for the Cysteinesulfenic Acid Ligand as a Catalytic Nucleophile. Angew.Chem.Int.Ed.Engl., 54, 2015
|
|
3WVE
| Crystal structure of Nitrile Hydratase mutant bR56K complexed with Trimethylacetonitrile, before photo-activation | 分子名称: | 2,2-dimethylpropanenitrile, CHLORIDE ION, FE (III) ION, ... | 著者 | Yamanaka, Y, Hashimoto, K, Noguchi, K, Yohda, M, Odaka, M. | 登録日 | 2014-05-17 | 公開日 | 2015-06-17 | 最終更新日 | 2015-11-04 | 実験手法 | X-RAY DIFFRACTION (1.57 Å) | 主引用文献 | Time-Resolved Crystallography of the Reaction Intermediate of Nitrile Hydratase: Revealing a Role for the Cysteinesulfenic Acid Ligand as a Catalytic Nucleophile. Angew.Chem.Int.Ed.Engl., 54, 2015
|
|
3WVD
| Crystal structure of Nitrile Hydratase mutant bR56K complexed with Trimethylacetonitrile, photo-activated for 50 min | 分子名称: | 2,2-dimethylpropanenitrile, FE (III) ION, MAGNESIUM ION, ... | 著者 | Yamanaka, Y, Hashimoto, K, Noguchi, K, Yohda, M, Odaka, M. | 登録日 | 2014-05-17 | 公開日 | 2015-06-17 | 最終更新日 | 2015-11-04 | 実験手法 | X-RAY DIFFRACTION (1.18 Å) | 主引用文献 | Time-Resolved Crystallography of the Reaction Intermediate of Nitrile Hydratase: Revealing a Role for the Cysteinesulfenic Acid Ligand as a Catalytic Nucleophile. Angew.Chem.Int.Ed.Engl., 54, 2015
|
|
3X26
| Crystal structure of Nitrile Hydratase mutant bR56K complexed with Trimethylacetonitrile, photo-activated for 5 min | 分子名称: | 2,2-dimethylpropanenitrile, CHLORIDE ION, FE (III) ION, ... | 著者 | Yamanaka, Y, Hashimoto, K, Noguchi, K, Yohda, M, Odaka, M. | 登録日 | 2014-12-10 | 公開日 | 2016-01-27 | 実験手法 | X-RAY DIFFRACTION (1.34 Å) | 主引用文献 | Time-Resolved Crystallography of the Reaction Intermediate of Nitrile Hydratase: Revealing a Role for the Cysteinesulfenic Acid Ligand as a Catalytic Nucleophile. Angew.Chem.Int.Ed.Engl., 54, 2015
|
|
3X25
| Crystal structure of Nitrile Hydratase mutant bR56K complexed with Trimethylacetonitrile, photo-activated for 700 min | 分子名称: | 2,2-dimethylpropanenitrile, CHLORIDE ION, FE (III) ION, ... | 著者 | Yamanaka, Y, Hashimoto, K, Noguchi, K, Yohda, M, Odaka, M. | 登録日 | 2014-12-10 | 公開日 | 2016-01-27 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | Time-Resolved Crystallography of the Reaction Intermediate of Nitrile Hydratase: Revealing a Role for the Cysteinesulfenic Acid Ligand as a Catalytic Nucleophile. Angew.Chem.Int.Ed.Engl., 54, 2015
|
|
3X24
| Crystal structure of Nitrile Hydratase mutant bR56K complexed with Trimethylacetonitrile, photo-activated for 120 min | 分子名称: | 2,2-dimethylpropanenitrile, FE (III) ION, MAGNESIUM ION, ... | 著者 | Yamanaka, Y, Hashimoto, K, Noguchi, K, Yohda, M, Odaka, M. | 登録日 | 2014-12-10 | 公開日 | 2016-01-27 | 実験手法 | X-RAY DIFFRACTION (1.24 Å) | 主引用文献 | Time-Resolved Crystallography of the Reaction Intermediate of Nitrile Hydratase: Revealing a Role for the Cysteinesulfenic Acid Ligand as a Catalytic Nucleophile. Angew.Chem.Int.Ed.Engl., 54, 2015
|
|
2DXS
| Crystal structure of HCV NS5B RNA polymerase complexed with a tetracyclic inhibitor | 分子名称: | Genome polyprotein, N-[(13-CYCLOHEXYL-6,7-DIHYDROINDOLO[1,2-D][1,4]BENZOXAZEPIN-10-YL)CARBONYL]-2-METHYL-L-ALANINE | 著者 | Adachi, T, Tsuruha, J, Doi, S, Murase, K, Ikegashira, K, Watanabe, S, Uehara, K, Orita, T, Nomura, A, Kamada, M. | 登録日 | 2006-08-30 | 公開日 | 2006-12-26 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Discovery of Conformationally Constrained Tetracyclic Compounds as Potent Hepatitis C Virus NS5B RNA Polymerase Inhibitors J.Med.Chem., 49, 2006
|
|
3VQS
| Crystal structure of HCV NS5B RNA polymerase with a novel piperazine inhibitor | 分子名称: | (2R)-4-(5-cyclopropyl[1,3]thiazolo[4,5-d]pyrimidin-2-yl)-N-[3-fluoro-4-(trifluoromethoxy)benzyl]-1-{[4-(trifluoromethyl)phenyl]sulfonyl}piperazine-2-carboxamide, CHLORIDE ION, RNA-directed RNA polymerase | 著者 | Adachi, T, Doi, S, Ando, I, Sugimoto, K, Orita, T, Nomura, A, Kamada, M. | 登録日 | 2012-03-30 | 公開日 | 2012-08-08 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Preclinical Characterization of JTK-853, a Novel Nonnucleoside Inhibitor of the Hepatitis C Virus RNA-Dependent RNA Polymerase. Antimicrob.Agents Chemother., 56, 2012
|
|
3VUW
| Crystal structure of A20 ZF7 in complex with linear ubiquitin, form I | 分子名称: | POTASSIUM ION, Polyubiquitin-C, Tumor necrosis factor alpha-induced protein 3, ... | 著者 | Nishimasu, H, Ishitani, R, Nureki, O. | 登録日 | 2012-07-09 | 公開日 | 2013-02-13 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation Embo J., 31, 2012
|
|
3VUX
| Crystal structure of A20 ZF7 in complex with linear ubiquitin, form II | 分子名称: | 1,2-ETHANEDIOL, POTASSIUM ION, Polyubiquitin-C, ... | 著者 | Nishimasu, H, Ishitani, R, Nureki, O. | 登録日 | 2012-07-09 | 公開日 | 2013-02-13 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.699 Å) | 主引用文献 | Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation Embo J., 31, 2012
|
|
3VUY
| Crystal structure of A20 ZF7 in complex with linear tetraubiquitin | 分子名称: | POTASSIUM ION, Polyubiquitin-C, Tumor necrosis factor alpha-induced protein 3, ... | 著者 | Nishimasu, H, Ishitani, R, Nureki, O. | 登録日 | 2012-07-09 | 公開日 | 2013-02-13 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.981 Å) | 主引用文献 | Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation Embo J., 31, 2012
|
|