1WG0
| Structural comparison of Nas6p protein structures in two different crystal forms | 分子名称: | Probable 26S proteasome regulatory subunit p28 | 著者 | Nakamura, Y, Umehara, T, Tanaka, A, Horikoshi, M, Yokoyama, S, Padmanabhan, B, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-05-27 | 公開日 | 2005-06-07 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.53 Å) | 主引用文献 | Structural comparison of Nas6p protein structures in two different crystal forms To be Published
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5WED
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7YQ2
| Crystal structure of photosystem II expressing psbA2 gene only | 分子名称: | (3R)-beta,beta-caroten-3-ol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ... | 著者 | Nakajima, Y, Suga, M, Shen, J.R. | 登録日 | 2022-08-05 | 公開日 | 2022-11-30 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Crystal structures of photosystem II from a cyanobacterium expressing psbA 2 in comparison to psbA 3 reveal differences in the D1 subunit. J.Biol.Chem., 298, 2022
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7YQ7
| Crystal structure of photosystem II expressing psbA3 gene only | 分子名称: | (3R)-beta,beta-caroten-3-ol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ... | 著者 | Nakajima, Y, Suga, M, Shen, J.R. | 登録日 | 2022-08-05 | 公開日 | 2022-11-30 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Crystal structures of photosystem II from a cyanobacterium expressing psbA 2 in comparison to psbA 3 reveal differences in the D1 subunit. J.Biol.Chem., 298, 2022
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6LEP
| Crystal structure of thiosulfate transporter YeeE inactive mutant - C91A | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Sulf_transp domain-containing protein, THIOSULFATE | 著者 | Tanaka, Y, Tsukazaki, T, Yoshikaie, K, Sugano, Y, Takeuchi, A, Uchino, S. | 登録日 | 2019-11-26 | 公開日 | 2020-09-02 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Crystal structure of a YeeE/YedE family protein engaged in thiosulfate uptake. Sci Adv, 6, 2020
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6LEO
| Crystal structure of thiosulfate transporter YeeE from Spirochaeta thermophila | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Sulf_transp domain-containing protein, THIOSULFATE | 著者 | Tanaka, Y, Tsukazaki, T, Yoshikaie, K, Takeuchi, A, Uchino, S, Sugano, Y. | 登録日 | 2019-11-26 | 公開日 | 2020-09-02 | 最終更新日 | 2020-09-30 | 実験手法 | X-RAY DIFFRACTION (2.52 Å) | 主引用文献 | Crystal structure of a YeeE/YedE family protein engaged in thiosulfate uptake. Sci Adv, 6, 2020
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1J2V
| Crystal Structure of CutA1 from Pyrococcus Horikoshii | 分子名称: | 102AA long hypothetical periplasmic divalent cation tolerance protein CUTA | 著者 | Tanaka, Y, Sakai, N, Yasutake, Y, Yao, M, Tsumoto, K, Kumagai, I, Tanaka, I. | 登録日 | 2003-01-11 | 公開日 | 2004-01-13 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structural implications for heavy metal-induced reversible assembly and aggregation of a protein: the case of Pyrococcus horikoshii CutA. Febs Lett., 556, 2004
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1UKU
| Crystal Structure of Pyrococcus horikoshii CutA1 Complexed with Cu2+ | 分子名称: | COPPER (II) ION, periplasmic divalent cation tolerance protein CutA | 著者 | Tanaka, Y, Yasutake, Y, Yao, M, Sakai, N, Tanaka, I, Tsumoto, K, Kumagai, I. | 登録日 | 2003-09-01 | 公開日 | 2004-01-13 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | Structural implications for heavy metal-induced reversible assembly and aggregation of a protein: the case of Pyrococcus horikoshii CutA. Febs Lett., 556, 2004
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1UMJ
| Crystal structure of Pyrococcus horikoshii CutA in the presence of 3M guanidine hydrochloride | 分子名称: | GUANIDINE, periplasmic divalent cation tolerance protein CutA | 著者 | Tanaka, Y, Tsumoto, K, Yasutake, Y, Sakai, N, Yao, M, Tanaka, I, Kumagai, I. | 登録日 | 2003-10-02 | 公開日 | 2004-10-05 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Structural evidence for guanidine-protein side chain interactions: crystal structure of CutA from Pyrococcus horikoshii in 3M guanidine hydrochloride Biochem.Biophys.Res.Commun., 323, 2004
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1WUQ
| Structure of GTP cyclohydrolase I Complexed with 8-oxo-GTP | 分子名称: | 8-OXO-GUANOSINE-5'-TRIPHOSPHATE, GTP cyclohydrolase I, ZINC ION | 著者 | Tanaka, Y, Nakagawa, N, Masui, R, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-12-08 | 公開日 | 2005-07-19 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Novel reaction mechanism of GTP cyclohydrolase I. High-resolution X-ray crystallography of Thermus thermophilus HB8 enzyme complexed with a transition state analogue, the 8-oxoguanine derivative J.Biochem.(Tokyo), 138, 2005
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1WUR
| Structure of GTP cyclohydrolase I Complexed with 8-oxo-dGTP | 分子名称: | 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, GTP cyclohydrolase I, ZINC ION | 著者 | Tanaka, Y, Nakagawa, N, Masui, R, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-12-08 | 公開日 | 2005-07-19 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.82 Å) | 主引用文献 | Novel reaction mechanism of GTP cyclohydrolase I. High-resolution X-ray crystallography of Thermus thermophilus HB8 enzyme complexed with a transition state analogue, the 8-oxoguanine derivative J.Biochem.(Tokyo), 138, 2005
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8ITH
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8ITG
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2YXX
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1C4L
| SOLUTION STRUCTURE OF AN RNA DUPLEX INCLUDING A C-U BASE-PAIR | 分子名称: | RNA (5'-R(*CP*CP*UP*GP*CP*GP*UP*CP*G)-3'), RNA (5'-R(*CP*GP*AP*CP*UP*CP*AP*GP*G)-3') | 著者 | Tanaka, Y, Kojima, C, Yamazaki, T, Kodama, T.S, Yasuno, K, Miyashita, S, Ono, A.M, Ono, A.S, Kainosho, M, Kyogoku, Y. | 登録日 | 1999-08-30 | 公開日 | 2000-08-09 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of an RNA duplex including a C-U base pair. Biochemistry, 39, 2000
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6M5Y
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8IDQ
| Crystal structure of reducing-end xylose-releasing exoxylanase in GH30 from Talaromyces cellulolyticus with xylose | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ... | 著者 | Nakamichi, Y, Watanabe, M, Fujii, T, Inoue, H, Morita, T. | 登録日 | 2023-02-14 | 公開日 | 2023-05-17 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Crystal structure of reducing-end xylose-releasing exoxylanase in subfamily 7 of glycoside hydrolase family 30. Proteins, 91, 2023
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8IDP
| Crystal structure of reducing-end xylose-releasing exoxylanase in GH30 from Talaromyces cellulolyticus | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ... | 著者 | Nakamichi, Y, Watanabe, M, Fujii, T, Inoue, H, Morita, T. | 登録日 | 2023-02-14 | 公開日 | 2023-05-17 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of reducing-end xylose-releasing exoxylanase in subfamily 7 of glycoside hydrolase family 30. Proteins, 91, 2023
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8HX6
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8HX7
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8HX9
| Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae with chorismate | 分子名称: | (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid, 4-amino-4-deoxychorismate synthase, FORMIC ACID, ... | 著者 | Nakamichi, Y, Watanabe, M. | 登録日 | 2023-01-04 | 公開日 | 2023-10-18 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.03 Å) | 主引用文献 | Structural basis for the allosteric pathway of 4-amino-4-deoxychorismate synthase. Acta Crystallogr D Struct Biol, 79, 2023
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8HX8
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1WM9
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4TKZ
| Crystal structure of phosphotransferase system component EIIA from Streptococcus agalactiae | 分子名称: | GLYCEROL, Putative uncharacterized protein gbs1890 | 著者 | Nakamichi, Y, Maruyama, Y, Oiki, S, Mikami, B, Murata, K, Hashimoto, W. | 登録日 | 2014-05-28 | 公開日 | 2014-08-20 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of phosphotransferase system component EIIA from Streptococcus agalactiae To Be Published
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2D5Y
| Aspartate Aminotransferase Mutant MC With Isovaleric Acid | 分子名称: | Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE | 著者 | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | 登録日 | 2005-11-08 | 公開日 | 2006-11-14 | 最終更新日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (1.98 Å) | 主引用文献 | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues To be Published
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