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1TI5
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Solution structure of plant defensin
分子名称: plant defensin
著者Liu, Y.J, Cheng, C.S, Liu, Y.N, Hsu, M.P, Chen, C.S, Lyu, P.C.
登録日2004-06-02
公開日2005-07-26
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of the plant defensin VrD1 from mung bean and its possible role in insecticidal activity against bruchids.
Proteins, 63, 2006
5YJ6
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BU of 5yj6 by Molmil
The exoglucanase CelS from Clostridium thermocellum
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36-dodecaoxaoctatriacontane-1,38-diol, Dockerin type I repeat-containing protein
著者Liu, Y.J, Liu, S.Y, Dong, S, Li, R.M, Feng, Y.G, Cui, Q.
登録日2017-10-09
公開日2018-01-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Determination of the native features of the exoglucanase Cel48S from Clostridium thermocellum
Biotechnol Biofuels, 11, 2018
5XZ4
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BU of 5xz4 by Molmil
The X-tay structure of Bumblebee PGRP-SA
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bumblebee peptidoglycan recognition protein SA, SULFATE ION
著者Liu, Y.J, Huang, J.X, Zhao, X.M, An, J.D.
登録日2017-07-11
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Structural Insights into the Preferential Binding of PGRP-SAs from Bumblebees and Honeybees to Dap-Type Peptidoglycans Rather than Lys-Type Peptidoglycans.
J Immunol., 202, 2019
5YJ7
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BU of 5yj7 by Molmil
Structural insight into the beta-GH1 glucosidase BGLN1 from oleaginous microalgae Nannochloropsis
分子名称: CALCIUM ION, GLYCEROL, Glycoside hydrolase
著者Dong, S, Liu, Y.J, Zhou, H.X, Xiao, Y, Xu, J, Cui, Q, Wang, X.Q, Feng, Y.G.
登録日2017-10-09
公開日2018-10-10
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structural insight into a GH1 beta-glucosidase from the oleaginous microalga, Nannochloropsis oceanica.
Int.J.Biol.Macromol., 170, 2021
5NS3
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Crystal structures of Cy5 cyanine fluorophores stacked onto the end of double-stranded RNA
分子名称: 50S ribosomal protein L5, double-stranded RNA
著者Liu, Y.J, Lilley, D.M.J.
登録日2017-04-25
公開日2017-12-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures of Cyanine Fluorophores Stacked onto the End of Double-Stranded RNA.
Biophys. J., 113, 2017
5NS4
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Crystal structures of Cy3 cyanine fluorophores stacked onto the end of double-stranded RNA
分子名称: 3-[(2~{Z})-2-[(~{E})-3-[3,3-dimethyl-1-(3-oxidanylpropyl)indol-1-ium-2-yl]prop-2-enylidene]-3,3-dimethyl-indol-1-yl]propan-1-ol, 50S ribosomal protein L5, MAGNESIUM ION, ...
著者Liu, Y.J, Lilley, D.M.J.
登録日2017-04-25
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures of Cyanine Fluorophores Stacked onto the End of Double-Stranded RNA.
Biophys. J., 113, 2017
5CNQ
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Crystal structure of the Holliday junction-resolving enzyme GEN1 (WT) in complex with product DNA, Mg2+ and Mn2+ ions
分子名称: DNA (5'-D(*TP*GP*AP*GP*CP*GP*GP*TP*GP*GP*TP*TP*GP*GP*T)-3'), MANGANESE (II) ION, Nuclease-like protein, ...
著者Liu, Y.J, Freeman, A.D.J, Declais, A.C, Wilson, T.J, Gartner, A, Lilley, D.M.J.
登録日2015-07-17
公開日2015-12-30
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.602 Å)
主引用文献Crystal Structure of a Eukaryotic GEN1 Resolving Enzyme Bound to DNA.
Cell Rep, 13, 2015
5CO8
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Crystal structure of the Holliday junction-resolving enzyme GEN1 (WT) in complex with product DNA and Mg2+ ion
分子名称: DNA (31-MER), DNA (5'-D(*AP*GP*AP*CP*TP*GP*CP*AP*GP*TP*TP*GP*AP*GP*TP*C)-3'), DNA (5'-D(*TP*GP*AP*GP*CP*GP*GP*TP*GP*GP*TP*TP*GP*GP*A)-3'), ...
著者Liu, Y.J, Freeman, A.D.J, Declais, A.C, Wilson, T.J, Gartner, A, Lilley, D.M.J.
登録日2015-07-20
公開日2016-01-13
最終更新日2018-11-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of a Eukaryotic GEN1 Resolving Enzyme Bound to DNA.
Cell Rep, 13, 2015
5EB9
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Crystal Structure Of Chicken CD8aa Homodimer
分子名称: CD8 alpha chain
著者Liu, Y.J, Qi, J.X, Xia, C.
登録日2015-10-18
公開日2016-09-14
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献The structural basis of chicken, swine and bovine CD8 alpha alpha dimers provides insight into the co-evolution with MHC I in endotherm species.
Sci Rep, 6, 2016
5EDX
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Crystal structure of swine CD8aa homodimer
分子名称: CD8 alpha antigen
著者Liu, Y.J, Qi, J.X, Zhang, N.Z, Xia, C.
登録日2015-10-22
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献The structural basis of chicken, swine and bovine CD8 alpha alpha dimers provides insight into the co-evolution with MHC I in endotherm species.
Sci Rep, 6, 2016
6LHH
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BU of 6lhh by Molmil
Crystal structure of chicken 8mer-BF2*1501
分子名称: ARG-ARG-ARG-GLU-GLN-THR-ASP-TYR, Beta-2-microglobulin, MHC class I
著者Liu, Y.J, Xia, C.
登録日2019-12-08
公開日2020-12-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献The Combination of CD8 alpha alpha and Peptide-MHC-I in a Face-to-Face Mode Promotes Chicken gamma delta T Cells Response.
Front Immunol, 11, 2020
6LHF
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Crystal structure of chicken cCD8aa/pBF2*15:01
分子名称: Beta-2-microglobulin, CD8 alpha chain, MHC class I, ...
著者Liu, Y.J, Xia, C.
登録日2019-12-08
公開日2020-12-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The Combination of CD8 alpha alpha and Peptide-MHC-I in a Face-to-Face Mode Promotes Chicken gamma delta T Cells Response.
Front Immunol, 11, 2020
6LHG
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BU of 6lhg by Molmil
Crystal structure of chicken cCD8aa/pBF2*04:01
分子名称: Beta-2-microglobulin, CD8 alpha chain, IE8 peptide, ...
著者Liu, Y.J, Xia, C.
登録日2019-12-08
公開日2020-12-09
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The Combination of CD8 alpha alpha and Peptide-MHC-I in a Face-to-Face Mode Promotes Chicken gamma delta T Cells Response.
Front Immunol, 11, 2020
7BWN
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BU of 7bwn by Molmil
Crystal Structure of a Designed Protein Heterocatenane
分子名称: Cellular tumor antigen p53, Chimera of Green fluorescent protein and p53dim
著者Liu, Y.J, Duan, Z.L, Fang, J, Zhang, F, Xiao, J.Y, Zhang, W.B.
登録日2020-04-15
公開日2020-06-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献Cellular Synthesis and X-ray Crystal Structure of a Designed Protein Heterocatenane.
Angew.Chem.Int.Ed.Engl., 59, 2020
5XZ3
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The X-ray structure of Apis mellifera PGRP-SA
分子名称: Peptidoglycan-recognition protein, SULFATE ION
著者Liu, Y.J, Huang, J.X, Zhao, X.M, An, J.D.
登録日2017-07-11
公開日2018-07-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Crystal structure of peptidoglycan recognition protein SA in Apis mellifera (Hymenoptera: Apidae).
Protein Sci., 27, 2018
1L6H
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Solution Structure of Plant nsLTP2 purified from Rice (oryza Sativa)
分子名称: Non-Specific Lipid Transfer Protein
著者Samuel, D, Lyu, P.-C.
登録日2002-03-11
公開日2002-10-02
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of plant nonspecific lipid transfer protein-2 from rice (Oryza sativa).
J.Biol.Chem., 277, 2002
6IVU
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BU of 6ivu by Molmil
Solution structure of the Sigma-anti-sigma factor complex RsgI1N-SigI1C from Clostridium thermocellum
分子名称: Anti-sigma-I factor RsgI1, RNA polymerase sigma factor SigI1
著者Wei, Z, Feng, Y.
登録日2018-12-04
公開日2019-05-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Alternative sigma I/anti-sigma I factors represent a unique form of bacterial sigma /anti-sigma complex.
Nucleic Acids Res., 47, 2019
6IVS
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Solution structure of the N-terminal domain of the anti-sigma factor RsgI1 from Clostridium thermocellum
分子名称: Anti-sigma-I factor RsgI1
著者Wei, Z, Feng, Y.
登録日2018-12-04
公開日2019-05-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Alternative sigma I/anti-sigma I factors represent a unique form of bacterial sigma /anti-sigma complex.
Nucleic Acids Res., 47, 2019
8X39
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Crystal structure of cellulosomal double-dockerin module of Clo1313_0689 from Clostridium thermocellum
分子名称: CALCIUM ION, Serine protease
著者Chen, C, Dong, S, Feng, Y.
登録日2023-11-12
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A cellulosomal double-dockerin module from Clostridium thermocellum shows distinct structural and cohesin-binding features.
Protein Sci., 33, 2024
8X3A
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Solution NMR structure of cellulosomal double-dockerin module of Clo1313_0689 from Clostridium thermocellum
分子名称: CALCIUM ION, Serine protease
著者Chen, C, Feng, Y.
登録日2023-11-12
公開日2024-04-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A cellulosomal double-dockerin module from Clostridium thermocellum shows distinct structural and cohesin-binding features.
Protein Sci., 33, 2024
5H1Y
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Crystal structure of the DDX41 DEAD domain in complex with SO42- and Mg2+
分子名称: MAGNESIUM ION, Probable ATP-dependent RNA helicase DDX41, SULFATE ION
著者Jiang, Y, Ouyang, S, Liu, Z.J.
登録日2016-10-13
公開日2017-01-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structural and functional analyses of human DDX41 DEAD domain
Protein Cell, 8, 2017
6KG9
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Solution structure of CaDoc0917 from Clostridium acetobutylicum
分子名称: And cellulose-binding endoglucanase family 9 CelL ortholog dockerin domain, CALCIUM ION
著者Feng, Y, Yao, X.
登録日2019-07-11
公開日2020-07-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
6KGF
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Crystal structure of CaDoc0917(R16D)-CaCohA2 complex at pH 8.2
分子名称: And cellulose-binding endoglucanase family 9 CelL ortholog dockerin domain, CALCIUM ION, Probably cellulosomal scaffolding protein, ...
著者Feng, Y, Yao, X.
登録日2019-07-11
公開日2020-07-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
8HDJ
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Periplasmic domain of RsgI2 of Clostridium thermocellum
分子名称: Anti-sigma-I factor RsgI2, Periplasmic domain of RsgI2
著者Chen, C, Dong, S, Feng, Y.G.
登録日2022-11-04
公開日2023-05-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Essential autoproteolysis of bacterial anti-sigma factor RsgI for transmembrane signal transduction.
Sci Adv, 9, 2023
8HER
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Solution structure of the periplasmic domain of RsgI6 from Clostridium thermocellum
分子名称: Anti-sigma factor
著者Chen, C, Feng, Y.
登録日2022-11-08
公開日2023-05-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Essential autoproteolysis of bacterial anti-sigma factor RsgI for transmembrane signal transduction.
Sci Adv, 9, 2023

 

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