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1YG0
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BU of 1yg0 by Molmil
Solution structure of apo-CopP from Helicobacter pylori
分子名称: COP associated protein
著者Lee, B.J, Park, S.J.
登録日2005-01-04
公開日2006-01-24
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of apo-CopP from Helicobacter pylori
To be published
7VHV
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BU of 7vhv by Molmil
Crystal structure of S. aureus D-alanine alanyl carrier protein ligase
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-alanine--D-alanyl carrier protein ligase, MAGNESIUM ION
著者Lee, B.J, Lee, I.-G, Im, H.G, Yoon, H.J.
登録日2021-09-23
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural and functional analysis of the D-alanyl carrier protein ligase DltA from Staphylococcus aureus Mu50.
Acta Crystallogr D Struct Biol, 78, 2022
4Z1B
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BU of 4z1b by Molmil
Structure of H204A mutant KDO8PS from H.pylori
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase
著者Lee, B.J, Cho, S, Im, H, Yoon, H.J.
登録日2015-03-27
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).
Eur.J.Med.Chem., 108, 2016
4Z1C
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BU of 4z1c by Molmil
Structure of Cadmium bound KDO8PS from H.pylori
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, CADMIUM ION
著者Lee, B.J, Cho, S, Im, H, Yoon, H.J.
登録日2015-03-27
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).
Eur.J.Med.Chem., 108, 2016
4Z1A
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BU of 4z1a by Molmil
Structure of apo form KDO8PS from H.pylori
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase
著者Lee, B.J, Cho, S, Im, H, Yoon, H.J.
登録日2015-03-27
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).
Eur.J.Med.Chem., 108, 2016
4Z1D
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BU of 4z1d by Molmil
Structure of PEP and zinc bound KDO8PS from H.pylori
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, PHOSPHOENOLPYRUVATE, ZINC ION
著者Lee, B.J, Cho, S, Im, H, Yoon, H.J.
登録日2015-03-27
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).
Eur.J.Med.Chem., 108, 2016
4N9H
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BU of 4n9h by Molmil
Crystal structure of Transcription regulation Protein CRP
分子名称: Catabolite gene activator
著者Lee, B.J, Seok, S.H, Im, H, Yoon, H.J.
登録日2013-10-21
公開日2014-07-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structures of inactive CRP species reveal the atomic details of the allosteric transition that discriminates cyclic nucleotide second messengers.
Acta Crystallogr.,Sect.D, 70, 2014
4NRN
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BU of 4nrn by Molmil
Crystal structure of metal-bound toxin from Helicobacter pylori
分子名称: ZINC ION, metal-bound toxin
著者Lee, B.J, Im, H, Pathak, C, Jang, S.B.
登録日2013-11-27
公開日2014-10-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Crystal structure of toxin HP0892 from Helicobacter pylori with two Zn(II) at 1.8 angstrom resolution
Protein Sci., 23, 2014
4LTT
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BU of 4ltt by Molmil
Crystal structure of native apo toxin from Helicobacter pylori
分子名称: Uncharacterized protein, toxin
著者Lee, B.J, Im, H, Pathak, C.C, Yoon, H.J.
登録日2013-07-23
公開日2014-02-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Crystal structure of apo and copper bound HP0894 toxin from Helicobacter pylori 26695 and insight into mRNase activity
Biochim.Biophys.Acta, 1834, 2013
4LSY
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BU of 4lsy by Molmil
Crystal structure of copper-bound L66S mutant toxin from Helicobacter pylori
分子名称: CITRATE ANION, COPPER (II) ION, Uncharacterized protein, ...
著者Lee, B.J, Im, H, Pathak, C.C, Yoon, H.J.
登録日2013-07-23
公開日2014-02-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献Crystal structure of apo and copper bound HP0894 toxin from Helicobacter pylori 26695 and insight into mRNase activity
Biochim.Biophys.Acta, 1834, 2013
5XR2
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BU of 5xr2 by Molmil
SAV0551
分子名称: LACTIC ACID, Protein/nucleic acid deglycase HchA, ZINC ION
著者Kim, H.J, Kwon, A.R, Lee, B.J.
登録日2017-06-07
公開日2017-11-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and functional studies of SAV0551 fromStaphylococcus aureusas a chaperone and glyoxalase III.
Biosci. Rep., 37, 2017
3U7L
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BU of 3u7l by Molmil
Crystal structures of the Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
分子名称: (S)-N-(cyclopentylmethyl)-2-(3-(3,5-difluorophenyl)ureido)-N-(2-(hydroxyamino)-2-oxoethyl)-3,3-dimethylbutanamide, Peptide deformylase, ZINC ION
著者Lee, S.J, Lee, S.-J, Lee, S.K, Yoon, H.-J, Lee, H.H, Kim, K.K, Lee, B.J, Suh, S.W.
登録日2011-10-14
公開日2012-06-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structures of Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
Acta Crystallogr.,Sect.D, 68, 2012
3U7M
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BU of 3u7m by Molmil
Crystal structures of the Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
分子名称: N-((2R,4S)-2-butyl-4-(3-(2-fluorophenyl)ureido)-5-methyl-3-oxohexyl)-N-hydroxyformamide, Peptide deformylase, ZINC ION
著者Lee, S.J, Lee, S.-J, Lee, S.K, Yoon, H.-J, Lee, H.H, Kim, K.K, Lee, B.J, Suh, S.W.
登録日2011-10-14
公開日2012-06-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structures of Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
Acta Crystallogr.,Sect.D, 68, 2012
6LTY
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BU of 6lty by Molmil
DNA bound antitoxin HigA3
分子名称: DNA (5'-D(P*CP*CP*AP*CP*GP*AP*GP*AP*TP*AP*TP*AP*AP*CP*CP*TP*AP*GP*AP*G)-3'), DNA (5'-D(P*CP*TP*CP*TP*AP*GP*GP*TP*TP*AP*TP*AP*TP*CP*TP*CP*GP*TP*GP*G)-3'), Putative antitoxin HigA3
著者Park, J.Y, Lee, B.J.
登録日2020-01-23
公開日2020-07-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.28 Å)
主引用文献Induced DNA bending by unique dimerization of HigA antitoxin.
Iucrj, 7, 2020
6LTZ
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BU of 6ltz by Molmil
Induced DNA bending by unique dimerization of HigA antitoxin
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Park, J.Y, Lee, B.J.
登録日2020-01-23
公開日2020-07-15
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.973 Å)
主引用文献Induced DNA bending by unique dimerization of HigA antitoxin.
Iucrj, 7, 2020
4Y1E
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BU of 4y1e by Molmil
SAV1875-C105D
分子名称: Uncharacterized protein SAV1875
著者Kim, H.J, Kwon, A.R, Lee, B.J.
登録日2015-02-07
公開日2016-01-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and functional insight into the different oxidation states of SAV1875 from Staphylococcus aureus
Biochem.J., 473, 2016
4Y0N
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BU of 4y0n by Molmil
SAV1875
分子名称: Uncharacterized protein SAV1875
著者Kim, H.J, Kwon, A.R, Lee, B.J.
登録日2015-02-06
公開日2016-01-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and functional insight into the different oxidation states of SAV1875 from Staphylococcus aureus
Biochem.J., 473, 2016
4Y1F
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BU of 4y1f by Molmil
SAV1875-E17D
分子名称: Uncharacterized protein SAV1875
著者Kim, H.J, Kwon, A.R, Lee, B.J.
登録日2015-02-07
公開日2016-01-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and functional insight into the different oxidation states of SAV1875 from Staphylococcus aureus
Biochem.J., 473, 2016
4Y1R
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BU of 4y1r by Molmil
SAV1875-cysteinesulfonic acid
分子名称: Uncharacterized protein SAV1875
著者Kim, H.J, Kwon, A.R, Lee, B.J.
登録日2015-02-08
公開日2016-01-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and functional insight into the different oxidation states of SAV1875 from Staphylococcus aureus
Biochem.J., 473, 2016
4Y1G
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BU of 4y1g by Molmil
SAV1875-E17N
分子名称: Uncharacterized protein SAV1875
著者Kim, H.J, Kwon, A.R, Lee, B.J.
登録日2015-02-07
公開日2016-01-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and functional insight into the different oxidation states of SAV1875 from Staphylococcus aureus
Biochem.J., 473, 2016
6IFC
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BU of 6ifc by Molmil
Crystal structure of VapBC from Salmonella typhimurium
分子名称: Antitoxin VapB, CALCIUM ION, tRNA(fMet)-specific endonuclease VapC
著者Park, D.W, Lee, B.J.
登録日2018-09-19
公開日2020-01-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal structure of proteolyzed VapBC and DNA-bound VapBC from Salmonella enterica Typhimurium LT2 and VapC as a putative Ca2+-dependent ribonuclease.
Faseb J., 34, 2020
6IFM
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BU of 6ifm by Molmil
Crystal structure of DNA bound VapBC from Salmonella typhimurium
分子名称: Antitoxin VapB, DNA backward (27-MER), DNA forward (27-MER), ...
著者Park, D.W, Lee, B.J.
登録日2018-09-20
公開日2020-01-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Crystal structure of proteolyzed VapBC and DNA-bound VapBC from Salmonella enterica Typhimurium LT2 and VapC as a putative Ca2+-dependent ribonuclease.
Faseb J., 34, 2020
3UI3
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BU of 3ui3 by Molmil
Structural and Biochemical Characterization of HP0315 from Helicobacter pylori as a VapD Protein with an Endoribonuclease Activity
分子名称: Immunoglobulin G-binding protein G, Virulence-associated protein D
著者Kwon, A.R, Kim, J.H, Lee, B.J.
登録日2011-11-04
公開日2012-02-08
最終更新日2017-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and biochemical characterization of HP0315 from Helicobacter pylori as a VapD protein with an endoribonuclease activity.
Nucleic Acids Res., 2012
4Z9E
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BU of 4z9e by Molmil
Alba from Thermoplasma volcanium
分子名称: DNA/RNA-binding protein Alba
著者Ma, C, Lee, S.J, Pathak, C, Lee, B.J.
登録日2015-04-10
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Alba from Thermoplasma volcanium belongs to alpha-NAT's: An insight into the structural aspects of Tv Alba and its acetylation by Tv Ard1.
Arch.Biochem.Biophys., 590, 2016
5X3T
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BU of 5x3t by Molmil
VapBC from Mycobacterium tuberculosis
分子名称: Antitoxin VapB26, MAGNESIUM ION, Ribonuclease VapC26
著者Kang, S.M, Kim, D.H, Yoon, H.J, Lee, B.J.
登録日2017-02-07
公開日2017-06-07
最終更新日2017-12-06
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Functional details of the Mycobacterium tuberculosis VapBC26 toxin-antitoxin system based on a structural study: insights into unique binding and antibiotic peptides.
Nucleic Acids Res., 45, 2017

 

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