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5T89
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BU of 5t89 by Molmil
Crystal structure of VEGF-A in complex with VEGFR-1 domains D1-6
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Vascular endothelial growth factor A, ...
著者Markovic-Mueller, S, Stuttfeld, E, Asthana, M, Weinert, T, Bliven, S, Goldie, K.N, Kisko, K, Capitani, G, Ballmer-Hofer, K.
登録日2016-09-07
公開日2017-02-01
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structure of the Full-length VEGFR-1 Extracellular Domain in Complex with VEGF-A.
Structure, 25, 2017
4BSJ
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Crystal structure of VEGFR-3 extracellular domains D4-5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 3
著者Leppanen, V.-M, Tvorogov, D, Kisko, K, Prota, A.E, Jeltsch, M, Anisimov, A, Markovic-Mueller, S, Stuttfeld, E, Goldie, K.N, Ballmer-Hofer, K, Alitalo, K.
登録日2013-06-10
公開日2013-07-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Mechanistic Insights Into Vegfr-3 Ligand Binding and Activation
Proc.Natl.Acad.Sci.USA, 110, 2013
4BSK
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Crystal structure of VEGF-C in complex with VEGFR-3 domains D1-2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, VASCULAR ENDOTHELIAL GROWTH FACTOR C, ...
著者Leppanen, V.M, Tvorogov, D, Kisko, K, Prota, A.E, Jeltsch, M, Anisimov, A, Markovic-Mueller, S, Stuttfeld, E, Goldie, K.N, Ballmer-Hofer, K, Alitalo, K.
登録日2013-06-10
公開日2013-07-31
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (4.201 Å)
主引用文献Structural and Mechanistic Insights Into Vegfr-3 Ligand Binding and Activation
Proc.Natl.Acad.Sci.USA, 110, 2013
5IV5
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Cryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex
分子名称: Baseplate hub protein gp27, Baseplate tail-tube protein gp48, Baseplate tail-tube protein gp54, ...
著者Taylor, N.M.I, Guerrero-Ferreira, R.C, Goldie, K.N, Stahlberg, H, Leiman, P.G.
登録日2016-03-19
公開日2016-05-18
最終更新日2018-02-07
実験手法ELECTRON MICROSCOPY (4.11 Å)
主引用文献Structure of the T4 baseplate and its function in triggering sheath contraction.
Nature, 533, 2016
5IV7
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BU of 5iv7 by Molmil
Cryo-electron microscopy structure of the star-shaped, hubless post-attachment T4 baseplate
分子名称: Baseplate wedge protein gp10, Baseplate wedge protein gp11, Baseplate wedge protein gp25, ...
著者Taylor, N.M.I, Guerrero-Ferreira, R.C, Goldie, K.N, Stahlberg, H, Leiman, P.G.
登録日2016-03-19
公開日2016-05-18
最終更新日2018-02-07
実験手法ELECTRON MICROSCOPY (6.77 Å)
主引用文献Structure of the T4 baseplate and its function in triggering sheath contraction.
Nature, 533, 2016
7O7F
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BU of 7o7f by Molmil
Structural basis of the activation of the CC chemokine receptor 5 by a chemokine agonist
分子名称: C-C chemokine receptor type 5, C-C motif chemokine 5, Fab antibody fragment heavy chain, ...
著者Isaikina, P, Tsai, C.-J, Dietz, N.B, Pamula, F, Goldie, K.N, Schertler, G.F.X, Maier, T, Stahlberg, H, Deupi, X, Grzesiek, S.
登録日2021-04-13
公開日2021-06-30
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structural basis of the activation of the CC chemokine receptor 5 by a chemokine agonist.
Sci Adv, 7, 2021
5OJQ
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The modeled structure of of wild type extended type VI secretion system sheath/tube complex in vibrio cholerae based on cryo-EM reconstruction of the non-contractile sheath/tube complex
分子名称: Haemolysin co-regulated protein, Type VI secretion protein, VipA
著者Wang, J, Brackmann, M, Castano-Diez, D, Kudryashev, M, Goldie, K, Maier, T, Stahlberg, H, Basler, M.
登録日2017-07-22
公開日2017-08-09
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of the extended type VI secretion system sheath-tube complex.
Nat Microbiol, 2, 2017
7AQS
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BU of 7aqs by Molmil
Crystal structure of E. coli DPS in space group P1
分子名称: DNA protection during starvation protein, FE (III) ION
著者Jakob, R.P, Pipercevic, J, Righetto, R, Goldie, K, Stahlberg, H, Maier, T, Hiller, S.
登録日2020-10-22
公開日2021-09-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Identification of a Dps contamination in Mitomycin-C-induced expression of Colicin Ia.
Biochim Biophys Acta Biomembr, 1863, 2021
5MXN
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BU of 5mxn by Molmil
Atomic model of the VipA/VipB/Hcp, the type six secretion system non-contractile sheath-tube of Vibrio cholerae from cryo-EM
分子名称: Haemolysin co-regulated protein, Type VI secretion protein
著者Wang, J, Brackmann, M, Castano-Diez, D, Kudryashev, M, Goldie, K, Maier, T, Stahlberg, H, Basler, M.
登録日2017-01-23
公開日2017-08-02
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of the extended type VI secretion system sheath-tube complex.
Nat Microbiol, 2, 2017
5MYU
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BU of 5myu by Molmil
VipA-N2/VipB contracted sheath of type VI secretion system
分子名称: Type VI secretion system protein ImpC, Uncharacterized protein
著者Wang, J, Brackmann, B, Castano-Diez, D, Kudryashev, M, Goldie, D, Maier, T, Stahlberg, H, Basler, M.
登録日2017-01-27
公開日2017-08-02
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structure of the extended type VI secretion system sheath-tube complex.
Nat Microbiol, 2, 2017
5G3X
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BU of 5g3x by Molmil
Structure of recombinant granulovirus polyhedrin
分子名称: GRANULOVIRUS POLYHEDRIN
著者Bunker, R.D, Chiu, E, Metcalf, P.
登録日2016-05-02
公開日2017-02-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Atomic structure of granulin determined from native nanocrystalline granulovirus using an X-ray free-electron laser.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5G0Z
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BU of 5g0z by Molmil
Structure of native granulovirus polyhedrin determined using an X-ray free-electron laser
分子名称: GRANULIN
著者Gati, C, Bunker, R.D, Oberthur, D, Metcalf, P, Henry, C.
登録日2016-03-23
公開日2017-02-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Atomic structure of granulin determined from native nanocrystalline granulovirus using an X-ray free-electron laser.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4WSN
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BU of 4wsn by Molmil
Crystal structure of the COP9 signalosome, a P1 crystal form
分子名称: COP9 signalosome complex subunit 1, COP9 signalosome complex subunit 2, COP9 signalosome complex subunit 3, ...
著者Bunker, R.D, Lingaraju, G.M, Thoma, N.H.
登録日2014-10-28
公開日2015-12-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (5.5 Å)
主引用文献Cullin-RING ubiquitin E3 ligase regulation by the COP9 signalosome.
Nature, 531, 2016
4YE7
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BU of 4ye7 by Molmil
N-terminal domain of Orf22, a Cydia pomonella granulovirus envelope protein
分子名称: ACETATE ION, ORF22 similar to XcGV ORF19
著者Busby, J.N, Metcalf, P.
登録日2015-02-23
公開日2016-03-09
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural studies of granulovirus envelope fibres.
To Be Published
6OGD
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BU of 6ogd by Molmil
Cryo-EM structure of YenTcA in its prepore state
分子名称: Chitinase 2, Toxin subunit YenA1, Toxin subunit YenA2
著者Piper, S.J, Brillault, L, Box, J.K, Landsberg, M.J.
登録日2019-04-02
公開日2019-05-08
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Cryo-EM structures of the pore-forming A subunit from the Yersinia entomophaga ABC toxin.
Nat Commun, 10, 2019
5IW9
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BU of 5iw9 by Molmil
Structure of bacteriophage T4 gp25, sheath polymerization initiator
分子名称: Baseplate wedge protein gp25
著者Leiman, P.G, Browning, C, Shneider, M.M.
登録日2016-03-22
公開日2016-05-11
最終更新日2016-06-08
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Structure of the T4 baseplate and its function in triggering sheath contraction.
Nature, 533, 2016
7O0W
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BU of 7o0w by Molmil
Cryo-EM structure of the RC-dLH complex (model_1b) from Gemmatimonas phototrophica at 2.47 A
分子名称: (19R,22S)-25-amino-22-hydroxy-22-oxido-16-oxo-17,21,23-trioxa-22lambda~5~-phosphapentacosan-19-yl (9Z)-hexadec-9-enoate, (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, (2R,5R,11R,14R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-2,14-bis(tetradecanoyloxy)-4,6,10,12,16-pentaoxa-5,11-diphosphatriacont-1-yl tetradecanoate, ...
著者Qian, P, Koblizek, M.
登録日2021-03-27
公開日2022-03-02
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (2.47 Å)
主引用文献2.4- angstrom structure of the double-ring Gemmatimonas phototrophica photosystem.
Sci Adv, 8, 2022
7O0U
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Cryo-EM structure (model_1a) of the RC-dLH complex from Gemmatimonas phototrophica at 2.4 A
分子名称: (19R,22S)-25-amino-22-hydroxy-22-oxido-16-oxo-17,21,23-trioxa-22lambda~5~-phosphapentacosan-19-yl (9Z)-hexadec-9-enoate, (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, (2R,5R,11R,14R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-2,14-bis(tetradecanoyloxy)-4,6,10,12,16-pentaoxa-5,11-diphosphatriacont-1-yl tetradecanoate, ...
著者Qian, P, Koblizek, M.
登録日2021-03-27
公開日2022-03-02
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (2.35 Å)
主引用文献2.4- angstrom structure of the double-ring Gemmatimonas phototrophica photosystem.
Sci Adv, 8, 2022
7O0X
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Cryo-EM structure (model_2b) of the RC-dLH complex from Gemmatimonas phototrophica at 2.44 A
分子名称: (19R,22S)-25-amino-22-hydroxy-22-oxido-16-oxo-17,21,23-trioxa-22lambda~5~-phosphapentacosan-19-yl (9Z)-hexadec-9-enoate, (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, (2R,5R,11R,14R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-2,14-bis(tetradecanoyloxy)-4,6,10,12,16-pentaoxa-5,11-diphosphatriacont-1-yl tetradecanoate, ...
著者Qian, P, Koblizek, M.
登録日2021-03-28
公開日2022-03-02
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (2.44 Å)
主引用文献2.4- angstrom structure of the double-ring Gemmatimonas phototrophica photosystem.
Sci Adv, 8, 2022
7O0V
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BU of 7o0v by Molmil
Cryo-EM structure (model_2a) of the RC-dLH complex from Gemmatimonas phototrophica at 2.5 A
分子名称: (19R,22S)-25-amino-22-hydroxy-22-oxido-16-oxo-17,21,23-trioxa-22lambda~5~-phosphapentacosan-19-yl (9Z)-hexadec-9-enoate, (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, (2R,5R,11R,14R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-2,14-bis(tetradecanoyloxy)-4,6,10,12,16-pentaoxa-5,11-diphosphatriacont-1-yl tetradecanoate, ...
著者Qian, P, Koblizek, M.
登録日2021-03-27
公開日2022-03-02
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献2.4- angstrom structure of the double-ring Gemmatimonas phototrophica photosystem.
Sci Adv, 8, 2022
5LYE
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BU of 5lye by Molmil
Re-refined structure of the bacteriophage T4 short tail fibre PDB entry 1H6W containing 71 additionally identified residues
分子名称: CHLORIDE ION, Gp12, SULFATE ION
著者van Raaij, M.J, Taylor, N.M.I, Leiman, P.G.
登録日2016-09-27
公開日2018-01-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Contractile injection systems of bacteriophages and related systems.
Mol. Microbiol., 108, 2018

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