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6TUB
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BU of 6tub by Molmil
Beta-endorphin amyloid fibril
分子名称: Beta-endorphin
著者Verasdonck, J, Seuring, C, Gath, J, Ghosh, D, Nespovitaya, N, Waelti, M.A, Maji, S, Cadalbert, R, Boeckmann, A, Guentert, P, Meier, B.H, Riek, R.
登録日2020-01-05
公開日2020-10-28
最終更新日2024-05-15
実験手法SOLID-STATE NMR
主引用文献The three-dimensional structure of human beta-endorphin amyloid fibrils.
Nat.Struct.Mol.Biol., 27, 2020
4XOB
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BU of 4xob by Molmil
Crystal structure of a FimH*DsF complex from E.coli K12 with bound heptyl alpha-D-mannopyrannoside
分子名称: FimF, Protein FimH, SULFATE ION, ...
著者Jakob, R.P, Eras, J, Navarra, G, Ernst, B, Glockshuber, R, Maier, T.
登録日2015-01-16
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.003 Å)
主引用文献Catch-bond mechanism of the bacterial adhesin FimH.
Nat Commun, 7, 2016
4XOA
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BU of 4xoa by Molmil
Crystal structure of a FimH*DsG complex from E.coli K12 in space group P1
分子名称: FimG, Protein FimH
著者Jakob, R.P, Eras, J, Glockshuber, R, Maier, T.
登録日2015-01-16
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.541 Å)
主引用文献Catch-bond mechanism of the bacterial adhesin FimH.
Nat Commun, 7, 2016
4XO9
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BU of 4xo9 by Molmil
Crystal structure of a FimH*DsG complex from E.coli K12 in space group C2
分子名称: Minor component of type 1 fimbriae, Protein FimH
著者Jakob, R.P, Eras, J, Glockshuber, R, Maier, T.
登録日2015-01-16
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Catch-bond mechanism of the bacterial adhesin FimH.
Nat Commun, 7, 2016
4XO8
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BU of 4xo8 by Molmil
Crystal structure of the FimH lectin domain from E.coli K12 in complex with heptyl alpha-D-mannopyrannoside
分子名称: Protein FimH, heptyl alpha-D-mannopyranoside
著者Jakob, R.P, Eras, J, Navarra, G, Ernst, B, Glockshuber, R, Maier, T.
登録日2015-01-16
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献Catch-bond mechanism of the bacterial adhesin FimH.
Nat Commun, 7, 2016
5IQN
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BU of 5iqn by Molmil
Crystal structure of the E. coli type 1 pilus subunit FimG (engineered variant with substitution Q134E; N-terminal FimG residues 1-12 truncated) in complex with the donor strand peptide DsF_SRIRIRGYVR
分子名称: 1,2-ETHANEDIOL, COBALT (II) ION, Protein FimF, ...
著者Giese, C, Eras, J, Kern, A, Scharer, M.A, Capitani, G, Glockshuber, R.
登録日2016-03-11
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Accelerating the Association of the Most Stable Protein-Ligand Complex by More than Two Orders of Magnitude.
Angew.Chem.Int.Ed.Engl., 55, 2016
5IQO
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BU of 5iqo by Molmil
Crystal structure of the E. coli type 1 pilus subunit FimG (engineered variant with substitutions Q134E and S138E; N-terminal FimG residues 1-12 truncated) in complex with the donor strand peptide DsF_T4R-T6R-D13N
分子名称: 1,2-ETHANEDIOL, COBALT (II) ION, PENTAETHYLENE GLYCOL, ...
著者Giese, C, Eras, J, Kern, A, Capitani, G, Glockshuber, R.
登録日2016-03-11
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.302 Å)
主引用文献Accelerating the Association of the Most Stable Protein-Ligand Complex by More than Two Orders of Magnitude.
Angew.Chem.Int.Ed.Engl., 55, 2016
5IQM
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BU of 5iqm by Molmil
Crystal structure of the E. coli type 1 pilus subunit FimG (engineered variant with substitution Q134E; N-terminal FimG residues 1-12 truncated) in complex with the donor strand peptide DsF_T4R-T6R-D13N
分子名称: COBALT (II) ION, Protein FimF, Protein FimG
著者Giese, C, Eras, J, Kern, A, Scharer, M.A, Capitani, G, Glockshuber, R.
登録日2016-03-11
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Accelerating the Association of the Most Stable Protein-Ligand Complex by More than Two Orders of Magnitude.
Angew.Chem.Int.Ed.Engl., 55, 2016
4X4J
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BU of 4x4j by Molmil
Structural and Functional Studies of BexE: Insights into Oxidation During BE-7585A Biosynthesis
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Putative oxygenase, SULFATE ION
著者Tsai, S.-C, Jackson, D.R, Patel, A, Barajas, J.F, Rohr, J, Yu, X, Liu, H.-W, Sasaki, E, Calveras, J, Metsa-Ketela, M.
登録日2014-12-02
公開日2015-12-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural and Functional Studies of BexE: Insights into Oxidation During BE-7585A Biosynthesis
To Be Published
4XOD
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BU of 4xod by Molmil
Crystal structure of a FimH*DsG complex from E.coli F18
分子名称: FimG protein, FimH protein
著者Jakob, R.P, Sauer, M.M, Glockshuber, R, Maier, T.
登録日2015-01-16
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Catch-bond mechanism of the bacterial adhesin FimH.
Nat Commun, 7, 2016
4XOC
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BU of 4xoc by Molmil
Crystal structure of the FimH lectin domain from E.coli F18 in complex with heptyl alpha-D-mannopyrannoside
分子名称: FimH protein, heptyl alpha-D-mannopyranoside
著者Jakob, R.P, Sauer, M.M, Navarra, G, Ernst, B, Glockshuber, R, Maier, T.
登録日2015-01-16
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Catch-bond mechanism of the bacterial adhesin FimH.
Nat Commun, 7, 2016
4XOE
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BU of 4xoe by Molmil
Crystal structure of a FimH*DsG complex from E.coli F18 with bound heptyl alpha-D-mannopyrannoside
分子名称: CACODYLATE ION, FimG protein, FimH protein, ...
著者Jakob, R.P, Sauer, M.M, Navarra, G, Ernst, B, Glockshuber, R, Maier, T.
登録日2015-01-16
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Catch-bond mechanism of the bacterial adhesin FimH.
Nat Commun, 7, 2016
7Q3N
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BU of 7q3n by Molmil
Cryo-EM of the complex between human uromodulin (UMOD)/Tamm-Horsfall protein (THP) and the FimH lectin domain from uropathogenic E. coli
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Type 1 fimbiral adhesin FimH, ...
著者Jovine, L, Xu, C, Stsiapanava, A, Carroni, M, Tunyasuvunakool, K, Jumper, J, Wu, B.
登録日2021-10-28
公開日2022-03-16
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (7.4 Å)
主引用文献Structure of the decoy module of human glycoprotein 2 and uromodulin and its interaction with bacterial adhesin FimH.
Nat.Struct.Mol.Biol., 29, 2022
2KJF
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BU of 2kjf by Molmil
The solution structure of the circular bacteriocin carnocyclin A (CclA)
分子名称: Carnocyclin-A
著者Martin-Visscher, L.A, Gong, X, Duszyk, M, Vederas, J.
登録日2009-05-28
公開日2009-08-18
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献The three-dimensional structure of carnocyclin A reveals that many circular bacteriocins share a common structural motif.
J.Biol.Chem., 284, 2009
7OTE
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BU of 7ote by Molmil
Src Kinase Domain in complex with ponatinib
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide, GLYCEROL, ...
著者Soriano-Maldonado, P, Cuesta-Hernandez, H.N, Plaza-Menacho, I.
登録日2021-06-10
公開日2022-06-22
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献An allosteric switch between the activation loop and a c-terminal palindromic phospho-motif controls c-Src function.
Nat Commun, 14, 2023
8PID
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BU of 8pid by Molmil
backtracked E. coli transcription complex paused at ops site and bound to RfaH
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-21
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PFJ
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BU of 8pfj by Molmil
fully recruited RfaH bound to E. coli transcription complex paused at ops site (not fully complementary scaffold; alternative state of RfaH)
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-16
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PIL
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BU of 8pil by Molmil
E. coli transcription complex paused at ops site and bound to RfaH and NusA
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-22
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PEN
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BU of 8pen by Molmil
fully recruited RfaH bound to E. coli transcription complex paused at ops site (alternative state of RfaH)
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-14
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PIM
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BU of 8pim by Molmil
fully recruited RfaH bound to E. coli transcription complex paused at ops site (not complementary scaffold)
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-22
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PDY
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BU of 8pdy by Molmil
E. coli RNA polymerase paused at ops site
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-13
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PH9
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BU of 8ph9 by Molmil
E. coli RNA polymerase paused at ops site (non-complementary scaffold)
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-19
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PIB
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BU of 8pib by Molmil
autoinhibited RfaH bound to E. coli transcription complex paused at ops site (encounter complex)
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-21
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PFG
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BU of 8pfg by Molmil
autoinhibited RfaH bound to E. coli transcription complex paused at ops site (encounter complex), not fully complementary scaffold
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-15
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PHK
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BU of 8phk by Molmil
fully recruited RfaH bound to E. coli transcription complex paused at ops site
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-20
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024

 

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