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7O1N
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BU of 7o1n by Molmil
Crystal Structure of Human Neuropilin-1 b1 Domain mutant - Y297A
分子名称: Neuropilin-1
著者Djordjevic, S, Chandanani, J, Faleeva, M, Pinotsis, N.
登録日2021-03-29
公開日2022-04-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Crystal Structure of Human Neuropilin-1 b1 Domain mutant - Y297A
To Be Published
1AF7
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BU of 1af7 by Molmil
CHER FROM SALMONELLA TYPHIMURIUM
分子名称: CHEMOTAXIS RECEPTOR METHYLTRANSFERASE CHER, S-ADENOSYL-L-HOMOCYSTEINE
著者Djordjevic, S, Stock, A.M.
登録日1997-03-22
公開日1998-01-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the chemotaxis receptor methyltransferase CheR suggests a conserved structural motif for binding S-adenosylmethionine.
Structure, 5, 1997
1A2O
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BU of 1a2o by Molmil
STRUCTURAL BASIS FOR METHYLESTERASE CHEB REGULATION BY A PHOSPHORYLATION-ACTIVATED DOMAIN
分子名称: CHEB METHYLESTERASE
著者Djordjevic, S, Goudreau, P.N, Xu, Q, Stock, A.M, West, A.H.
登録日1998-01-06
公開日1998-04-29
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for methylesterase CheB regulation by a phosphorylation-activated domain.
Proc.Natl.Acad.Sci.USA, 95, 1998
1BC5
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BU of 1bc5 by Molmil
CHEMOTAXIS RECEPTOR RECOGNITION BY PROTEIN METHYLTRANSFERASE CHER
分子名称: CHEMOTAXIS RECEPTOR, CHEMOTAXIS RECEPTOR METHYLTRANSFERASE, COBALT (II) ION, ...
著者Djordjevic, S, Stock, A.M.
登録日1998-05-05
公開日1998-11-25
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Chemotaxis receptor recognition by protein methyltransferase CheR.
Nat.Struct.Biol., 5, 1998
1BUC
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BU of 1buc by Molmil
THREE-DIMENSIONAL STRUCTURE OF BUTYRYL-COA DEHYDROGENASE FROM MEGASPHAERA ELSDENII
分子名称: ACETOACETYL-COENZYME A, BUTYRYL-COA DEHYDROGENASE, FLAVIN-ADENINE DINUCLEOTIDE
著者Djordjevic, S, Pace, C.P, Stankovich, M.T, Kim, J.J.P.
登録日1994-09-06
公開日1995-04-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Three-dimensional structure of butyryl-CoA dehydrogenase from Megasphaera elsdenii.
Biochemistry, 34, 1995
1J04
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BU of 1j04 by Molmil
Structural mechanism of enzyme mistargeting in hereditary kidney stone disease in vitro
分子名称: (AMINOOXY)ACETIC ACID, GLYCEROL, alanine--glyoxylate aminotransferase
著者Zhang, X, Djordjevic, S, Bartlam, M, Ye, S, Rao, Z, Danpure, C.J.
登録日2002-10-30
公開日2003-11-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural implications of a G170R mutation of alanine:glyoxylate aminotransferase that is associated with peroxisome-to-mitochondrion mistargeting.
Acta Crystallogr.,Sect.F, 66, 2010
6ESK
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BU of 6esk by Molmil
Structure of the apo form of AioX from Rhizobium sp. str. NT-26
分子名称: GLYCEROL, Putative periplasmic phosphite-binding-like protein (Pbl) PtxB-like protein designated AioX
著者Djordjevic, S, Badilla, C, Cole, A, Santini, J.
登録日2017-10-20
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A new family of periplasmic-binding proteins that sense arsenic oxyanions.
Sci Rep, 8, 2018
6EU7
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BU of 6eu7 by Molmil
Structure of the arsenite-bound form of AioX from Rhizobium sp. str. NT-26
分子名称: Putative periplasmic phosphite-binding-like protein (Pbl) PtxB-like protein designated AioX
著者Djordjevic, S, Badilla, C, Cole, A, Santini, J.
登録日2017-10-28
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A new family of periplasmic-binding proteins that sense arsenic oxyanions.
Sci Rep, 8, 2018
6ESV
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BU of 6esv by Molmil
Structure of the phosphate-bound form of AioX from Rhizobium sp. str. NT-26
分子名称: PHOSPHATE ION, Putative periplasmic phosphite-binding-like protein (Pbl) PtxB-like protein designated AioX
著者Djordjevic, S, Badilla, C, Cole, A, Santini, J.
登録日2017-10-24
公開日2018-10-17
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献A new family of periplasmic-binding proteins that sense arsenic oxyanions.
Sci Rep, 8, 2018
1ME5
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BU of 1me5 by Molmil
Crystal Structure of Mycobacterium Tuberculosis Alkylperoxidase AhpD H132Q Mutant
分子名称: ALKYLHYDROPEROXIDASE D
著者Nunn, C.M, Djordjevic, S, Ortiz de Montellano, P.R.
登録日2002-08-08
公開日2002-09-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The mechanism of Mycobacterium tuberculosis alkylhydroperoxidase AhpD as defined by mutagenesis, crystallography, and kinetics.
J.Biol.Chem., 278, 2003
5JHK
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BU of 5jhk by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-6 ligand.
分子名称: N-(benzenecarbonyl)glycyl-L-arginine, Neuropilin-1
著者Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
登録日2016-04-21
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018
5J1X
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BU of 5j1x by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-5 ligand.
分子名称: DIMETHYL SULFOXIDE, Neuropilin-1, N~2~-(tert-butoxycarbonyl)-L-arginine
著者Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
登録日2016-03-29
公開日2017-04-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018
3E0U
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BU of 3e0u by Molmil
Crystal structure of T. cruzi GPX1
分子名称: AMMONIUM ION, GLYCEROL, Glutathione peroxidase
著者Patel, S.H, Hussain, S, Harris, R, Driscoll, P, Djordjevic, S.
登録日2008-08-01
公開日2009-08-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into the catalytic mechanism of Trypanosoma cruzi GPXI (glutathione peroxidase-like enzyme I).
Biochem.J., 425, 2010
4RN5
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BU of 4rn5 by Molmil
B1 domain of human Neuropilin-1 with acetate ion in a ligand-binding site
分子名称: ACETATE ION, GLYCEROL, Neuropilin-1, ...
著者Allerston, C.K, Yelland, T.S, Jarvis, A, Jenkins, K, Winfield, N, Cheng, L, Jia, H, Zachary, I, Selwood, D.L, Djordjevic, S.
登録日2014-10-23
公開日2015-10-28
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Conserved water molecules in a ligand-binding site of neuropilin-1
To be Published
1GU9
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BU of 1gu9 by Molmil
Crystal Structure of Mycobacterium tuberculosis Alkylperoxidase AhpD
分子名称: ALKYLHYDROPEROXIDASE D
著者Nunn, C.M, Djordjevic, S, Hillas, P.J, Nishida, C, Ortiz de Montellano, P.R.
登録日2002-01-24
公開日2002-02-14
最終更新日2018-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Crystal Structure of Mycobacterium Tuberculosis Alkylhydroperoxidase Ahpd, a Potential Target for Antitubercular Drug Design
J.Biol.Chem., 277, 2002
1Q31
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BU of 1q31 by Molmil
Crystal Structure of the Tobacco Etch Virus Protease C151A mutant
分子名称: BETA-MERCAPTOETHANOL, Nuclear inclusion protein A
著者Nunn, C.M, Djordjevic, S, George, R.R, Urquhart, G.T, Chao, L.H, Tsuchiya, Y.
登録日2003-07-28
公開日2004-11-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of tobacco etch virus protease shows the protein C terminus bound within the active site.
J.Mol.Biol., 350, 2005
3I97
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BU of 3i97 by Molmil
B1 domain of human Neuropilin-1 bound with small molecule EG00229
分子名称: (S)-2-(3-(benzo[c][1,2,5]thiadiazole-4-sulfonamido)thiophene-2-carboxamido)-5-guanidinopentanoic acid, GLYCEROL, Neuropilin-1
著者Allerston, C.K, Djordjevic, S.
登録日2009-07-10
公開日2010-03-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Small molecule inhibitors of the neuropilin-1 vascular endothelial growth factor A (VEGF-A) interaction.
J.Med.Chem., 53, 2010
3O7W
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BU of 3o7w by Molmil
The Crystal Structure of Human Leucine Carboxyl Methyltransferase 1
分子名称: GLYCEROL, Leucine carboxyl methyltransferase 1, S-ADENOSYLMETHIONINE, ...
著者Tsai, M.L, Cronin, N, Djordjevic, S.
登録日2010-08-01
公開日2010-09-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structure of human leucine carboxyl methyltransferase 1 that regulates protein phosphatase PP2A
Acta Crystallogr.,Sect.D, 67, 2011
2I08
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BU of 2i08 by Molmil
Solvation effect in conformational changes of EF-hand proteins: X-ray structure of Ca2+-saturated double mutant Q41L-K75I of N-domain of calmodulin
分子名称: CALCIUM ION, Calmodulin, GLYCEROL
著者Ababou, A, Parkinson, G.N, Desjarlais, J.R, Djordjevic, S.
登録日2006-08-10
公開日2007-08-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Solvation effect in conformational changes of EF-hand proteins: X-ray structure of double mutant Q41L-K75I of N-domain of calmodulin
To be Published
2AR5
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BU of 2ar5 by Molmil
Crystal structure of the mammalian C2alpha-PI3 Kinase PX-domain
分子名称: GLYCEROL, Phosphoinositide 3-kinase
著者Parkinson, G.N, Vines, D, Driscoll, P.C, Djordjevic, S.
登録日2005-08-19
公開日2006-10-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Ligand-binding specificity of PI3Kinase C2alpha PX domain.
To be Published
5IJR
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BU of 5ijr by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-1 ligand.
分子名称: DIMETHYL SULFOXIDE, L-HOMOARGININE, Neuropilin-1
著者Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
登録日2016-03-02
公開日2017-03-29
最終更新日2018-07-11
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018
5IYY
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BU of 5iyy by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-4 ligand.
分子名称: Neuropilin-1, N~2~-[(benzyloxy)carbonyl]-L-arginine
著者Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
登録日2016-03-24
公開日2017-04-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018
2REA
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BU of 2rea by Molmil
Crystal structures of C2ALPHA-PI3 kinase PX-domain domain indicate conformational change associated with ligand binding.
分子名称: Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing alpha polypeptide
著者Parkinson, G.N, Vines, D, Driscoll, P.C, Djordjevic, S.
登録日2007-09-26
公開日2007-11-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of PI3K-C2alpha PX domain indicate conformational change associated with ligand binding
Bmc Struct.Biol., 8, 2008
2RED
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BU of 2red by Molmil
Crystal structures of C2ALPHA-PI3 kinase PX-domain domain indicate conformational change associated with ligand binding.
分子名称: GLYCEROL, Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing alpha polypeptide
著者Parkinson, G.N, Vines, D, Driscoll, P.C, Djordjevic, S.
登録日2007-09-26
公開日2007-11-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of PI3K-C2alpha PX domain indicate conformational change associated with ligand binding
Bmc Struct.Biol., 8, 2008
5JGQ
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BU of 5jgq by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-7 ligand.
分子名称: DIMETHYL SULFOXIDE, Neuropilin-1, N~2~-(benzenecarbonyl)-L-arginine
著者Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
登録日2016-04-20
公開日2017-05-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018

 

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