Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6U3G
DownloadVisualize
BU of 6u3g by Molmil
Best fitting antiparallel model for Volume 2 of truncated dimeric Cytohesin-3 (Grp1; amino acids 14-399)
分子名称: Cytohesin-3, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
著者Das, S, Lambright, D.G.
登録日2019-08-21
公開日2019-09-25
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (53 Å)
主引用文献Structural Organization and Dynamics of Homodimeric Cytohesin Family Arf GTPase Exchange Factors in Solution and on Membranes.
Structure, 27, 2019
6U3E
DownloadVisualize
BU of 6u3e by Molmil
Best fitting antiparallel model for Volume 1 of truncated dimeric Cytohesin-3 (Grp1; amino acids 14-399)
分子名称: Cytohesin-3, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
著者Das, S, Lambright, D.G.
登録日2019-08-21
公開日2019-09-25
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (53 Å)
主引用文献Structural Organization and Dynamics of Homodimeric Cytohesin Family Arf GTPase Exchange Factors in Solution and on Membranes.
Structure, 27, 2019
6U96
DownloadVisualize
BU of 6u96 by Molmil
Actin phalloidin at BeFx state
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Das, S, Ge, P, Durer, Z.A.O, Grintsevich, E.E, Zhou, Z.H, Reisler, E.
登録日2019-09-06
公開日2020-05-13
最終更新日2020-05-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献D-loop Dynamics and Near-Atomic-Resolution Cryo-EM Structure of Phalloidin-Bound F-Actin.
Structure, 28, 2020
8GMX
DownloadVisualize
BU of 8gmx by Molmil
Crystal structure of pilin-specific sortase SrtC2 from Lactobacillus rhamnosus GG
分子名称: Class C sortase
著者Das, S, Megta, A.K, Pratap, S, Krishnan, V.
登録日2022-08-22
公開日2023-08-30
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Crystal structure of pilin-specific sortase SrtC2 from Lactobacillus rhamnosus GG
To Be Published
5GO6
DownloadVisualize
BU of 5go6 by Molmil
Structure of sortase E T196V mutant from Streptomyces avermitilis
分子名称: Putative secreted protein, SULFATE ION
著者Das, S, Pawale, V.S, Dadireddy, V, Roy, R.P, Ramakumar, S.
登録日2016-07-26
公開日2017-07-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of sortase E T196V mutant from Streptomyces avermitilis
To Be Published
5GO5
DownloadVisualize
BU of 5go5 by Molmil
Structure of sortase E from Streptomyces avermitilis
分子名称: GLYCINE, SULFATE ION, sortase
著者Das, S, Pawale, V.S, Dadireddy, V, Roy, R.P, Ramakumar, S.
登録日2016-07-26
公開日2017-03-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure and specificity of a new class of Ca2+-independent housekeeping sortase from Streptomyces avermitilis provide insights into its non-canonical substrate preference.
J. Biol. Chem., 292, 2017
5FDY
DownloadVisualize
BU of 5fdy by Molmil
Crystal structure of the Voltage-gated Sodium Channel Beta 2 subunit extracellular domain, C72A/C75A mutant
分子名称: GLYCEROL, Sodium channel subunit beta-2
著者Das, S, Van Petegem, F.
登録日2015-12-16
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Binary architecture of the Nav1.2-beta 2 signaling complex.
Elife, 5, 2016
5FEB
DownloadVisualize
BU of 5feb by Molmil
Crystal structure of the Voltage-gated Sodium Channel Beta 2 subunit extracellular domain
分子名称: GLYCEROL, Sodium channel subunit beta-2
著者Das, S, Van Petegem, F.
登録日2015-12-16
公開日2016-03-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Binary architecture of the Nav1.2-beta 2 signaling complex.
Elife, 5, 2016
2GET
DownloadVisualize
BU of 2get by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-I (LT)
分子名称: GLYCEROL, Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
著者Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
登録日2006-03-20
公開日2006-06-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GEV
DownloadVisualize
BU of 2gev by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-II (LT)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Pantothenate kinase, ...
著者Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
登録日2006-03-20
公開日2006-06-06
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GEU
DownloadVisualize
BU of 2geu by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-II (RT)
分子名称: Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
著者Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
登録日2006-03-20
公開日2006-06-06
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GES
DownloadVisualize
BU of 2ges by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-I (RT)
分子名称: Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
著者Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
登録日2006-03-20
公開日2006-06-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
4I2N
DownloadVisualize
BU of 4i2n by Molmil
Crystal structure of 31kD Heat Shock Protein, VcHsp31 from Vibrio cholerae
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Intracellular protease/amidase
著者Das, S, Sen, U.
登録日2012-11-22
公開日2013-11-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Temperature dependent structural flexibility and functional activation of 31kD Heat Shock Protein, VcHsp31 from Vibrio cholerae
To be Published
2LXD
DownloadVisualize
BU of 2lxd by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for LMO2(LIM2)-Ldb1(LID)
分子名称: Rhombotin-2,LIM domain-binding protein 1, ZINC ION
著者Dastmalchi, S, Wilkinson-White, L, Kwan, A.H, Gamsjaeger, R, Mackay, J.P, Matthews, J.M.
登録日2012-08-20
公開日2012-09-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a tethered Lmo2(LIM2) /Ldb1(LID) complex.
Protein Sci., 21, 2012
5V3I
DownloadVisualize
BU of 5v3i by Molmil
Crystal structure of the VS ribozyme - wild-type C634
分子名称: VS Ribozyme RNA
著者DasGupta, S, Suslov, N.B, Piccirilli, J.A.
登録日2017-03-07
公開日2017-07-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.293 Å)
主引用文献Structural Basis for Substrate Helix Remodeling and Cleavage Loop Activation in the Varkud Satellite Ribozyme.
J. Am. Chem. Soc., 139, 2017
6VSV
DownloadVisualize
BU of 6vsv by Molmil
Crystal structure of a disease mutant of the Voltage-gated Sodium Channel Beta 4 subunit extracellular domain
分子名称: Sodium channel subunit beta-4
著者Das, S, Van Petegem, F.
登録日2020-02-12
公開日2020-08-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Biophysical Investigation of Sodium Channel Interaction with beta-Subunit Variants Associated with Arrhythmias.
Bioelectricity, 2, 2020
6VRR
DownloadVisualize
BU of 6vrr by Molmil
Crystal structure of a disease mutant of the Voltage-gated Sodium Channel Beta 2 subunit extracellular domain
分子名称: GLYCEROL, Sodium channel subunit beta-2
著者Das, S, Van Petegem, F.
登録日2020-02-09
公開日2020-08-26
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Biophysical Investigation of Sodium Channel Interaction with beta-Subunit Variants Associated with Arrhythmias.
Bioelectricity, 2, 2020
6BBQ
DownloadVisualize
BU of 6bbq by Molmil
Model for extended volume of truncated monomeric Cytohesin-3 (Grp1; amino acids 63-399) E161A Arf6 Q67L fusion protein
分子名称: Cytohesin-3,ADP-ribosylation factor 6, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, ...
著者Das, S, Malaby, A.W, Lambright, D.G.
登録日2017-10-19
公開日2018-01-10
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Structural Dynamics Control Allosteric Activation of Cytohesin Family Arf GTPase Exchange Factors.
Structure, 26, 2018
5HGC
DownloadVisualize
BU of 5hgc by Molmil
A Serpin structure
分子名称: (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione, 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranose, SULFATE ION, ...
著者Das, S, Vashchenko, G.V, Van Petegem, F.
登録日2016-01-08
公開日2016-04-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献A Serpin structure
J.Biol.Chem., 2016
6BBP
DownloadVisualize
BU of 6bbp by Molmil
Model for compact volume of truncated monomeric Cytohesin-3 (Grp1; amino acids 63-399) E161A 6GS Arf6 Q67L fusion protein
分子名称: Cytohesin-3,ADP-ribosylation factor 6, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, ...
著者Das, S, Malaby, A.W, Lambright, D.G.
登録日2017-10-19
公開日2018-01-10
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Structural Dynamics Control Allosteric Activation of Cytohesin Family Arf GTPase Exchange Factors.
Structure, 26, 2018
3MXC
DownloadVisualize
BU of 3mxc by Molmil
Structures of Grb2-SH2 Domain and AICD peptide Complexes Reveal a Conformational Switch and Their Functional Implications.
分子名称: AICD peptide, Growth factor receptor-bound protein 2
著者Sen, U, Das, S.
登録日2010-05-07
公開日2011-05-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Functional Implications of the Conformational Switch in AICD Peptide upon Binding to Grb2-SH2 Domain.
J.Mol.Biol., 414, 2011
3MXY
DownloadVisualize
BU of 3mxy by Molmil
Structures of Grb2-SH2 Domain and AICD peptide Complexes Reveal a Conformational Switch and Their Functional Implications.
分子名称: AICD peptide E683V variant, Growth factor receptor-bound protein 2
著者Sen, U, Das, S.
登録日2010-05-08
公開日2011-05-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Functional Implications of the Conformational Switch in AICD Peptide upon Binding to Grb2-SH2 Domain.
J.Mol.Biol., 414, 2011
6B3K
DownloadVisualize
BU of 6b3k by Molmil
Crystal structure of mutant Spinach RNA aptamer in complex with Fab BL3-6
分子名称: Heavy chain of Fab BL3-6, Light chain of Fab BL3-6, MAGNESIUM ION, ...
著者DasGupta, S, Koirala, D, Shelke, S.A, Piccirilli, J.A.
登録日2017-09-22
公開日2017-12-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Affinity maturation of a portable Fab-RNA module for chaperone-assisted RNA crystallography.
Nucleic Acids Res., 46, 2018
4I46
DownloadVisualize
BU of 4i46 by Molmil
Crystal structure of 31kD Heat Shock Protein, VcHsp31 from Vibrio cholerae
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Intracellular protease/amidase
著者Sen, U, Das, S.
登録日2012-11-27
公開日2013-11-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Temperature dependent structural flexibility and functional activation of 31kD Heat Shock Protein, VcHsp31 from Vibrio cholerae
To be Published
4MZ3
DownloadVisualize
BU of 4mz3 by Molmil
Crystal structure of the voltage-gated sodium channel beta 4 subunit extracellular domain, C131W mutant
分子名称: Sodium channel subunit beta-4
著者Das, S, Van Petegem, F.
登録日2013-09-28
公開日2013-12-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.741 Å)
主引用文献Crystallographic insights into sodium-channel modulation by the beta 4 subunit.
Proc.Natl.Acad.Sci.USA, 110, 2013

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon