Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1J4E
DownloadVisualize
BU of 1j4e by Molmil
FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE COVALENTLY BOUND TO THE SUBSTRATE DIHYDROXYACETONE PHOSPHATE
分子名称: 1,3-DIHYDROXYACETONEPHOSPHATE, FRUCTOSE-BISPHOSPHATE ALDOLASE A
著者Choi, K.H, Shi, J, Hopkins, C.E, Tolan, D.R, Allen, K.N.
登録日2001-09-19
公開日2002-02-13
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Snapshots of catalysis: the structure of fructose-1,6-(bis)phosphate aldolase covalently bound to the substrate dihydroxyacetone phosphate.
Biochemistry, 40, 2001
2CJQ
DownloadVisualize
BU of 2cjq by Molmil
Bovine viral diarrhea virus CP7-R12 RNA-dependent RNA polymerase
分子名称: RNA-DIRECTED RNA POLYMERASE
著者Choi, K.H, Gallei, A, Becher, P, Rossmann, M.G.
登録日2006-04-05
公開日2006-07-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Structure of Bovine Viral Diarrhea Virus RNA-Dependent RNA Polymerase and its Amino-Terminal Domain.
Structure, 14, 2006
1CQD
DownloadVisualize
BU of 1cqd by Molmil
THE 2.1 ANGSTROM STRUCTURE OF A CYSTEINE PROTEASE WITH PROLINE SPECIFICITY FROM GINGER RHIZOME, ZINGIBER OFFICINALE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (PROTEASE II), ...
著者Choi, K.H, Laursen, R.A, Allen, K.N.
登録日1999-06-15
公開日1999-09-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The 2.1 A structure of a cysteine protease with proline specificity from ginger rhizome, Zingiber officinale.
Biochemistry, 38, 1999
1S48
DownloadVisualize
BU of 1s48 by Molmil
Crystal structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from BVDV
分子名称: RNA-dependent RNA polymerase
著者Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
登録日2004-01-15
公開日2004-04-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1S4F
DownloadVisualize
BU of 1s4f by Molmil
Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV)
分子名称: RNA-dependent RNA polymerase
著者Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
登録日2004-01-16
公開日2004-04-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1S49
DownloadVisualize
BU of 1s49 by Molmil
Crystal Structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from bovine viral diarrhea virus complexed with GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, RNA-dependent RNA polymerase
著者Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
登録日2004-01-15
公開日2004-04-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
6ALD
DownloadVisualize
BU of 6ald by Molmil
RABBIT MUSCLE ALDOLASE A/FRUCTOSE-1,6-BISPHOSPHATE COMPLEX
分子名称: 1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM), FRUCTOSE-1,6-BIS(PHOSPHATE) ALDOLASE
著者Choi, K.H, Mazurkie, A.S, Morris, A.J, Utheza, D, Tolan, D.R, Allen, K.N.
登録日1998-12-23
公開日2000-01-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of a fructose-1,6-bis(phosphate) aldolase liganded to its natural substrate in a cleavage-defective mutant at 2.3 A(,).
Biochemistry, 38, 1999
5CCV
DownloadVisualize
BU of 5ccv by Molmil
Crystal structure of full-length NS5 from dengue virus type 3
分子名称: RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Klema, V.J, Choi, K.H.
登録日2015-07-02
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Dengue Virus Nonstructural Protein 5 (NS5) Assembles into a Dimer with a Unique Methyltransferase and Polymerase Interface.
Plos Pathog., 12, 2016
8SP9
DownloadVisualize
BU of 8sp9 by Molmil
Crystal Structure of Coxsackievirus B3 (CVB3) Cloverleaf RNA with tRNA scaffold
分子名称: tRNA scaffold,CVB3 Cloverleaf RNA
著者Gottipati, K, McNeme, S.C, Choi, K.H.
登録日2023-05-02
公開日2023-08-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Structural basis for cloverleaf RNA-initiated viral genome replication.
Nucleic Acids Res., 51, 2023
8S95
DownloadVisualize
BU of 8s95 by Molmil
Crystal Structure of Poliovirus (type 1 Mahoney) cloverleaf RNA with tRNA scaffold
分子名称: Lysine tRNA scaffold,Poliovirus cloverleaf RNA
著者McNeme, S.C, Choi, K.H.
登録日2023-03-27
公開日2023-08-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for cloverleaf RNA-initiated viral genome replication.
Nucleic Acids Res., 51, 2023
8TQX
DownloadVisualize
BU of 8tqx by Molmil
Crystal structure of the Zika virus stem-loop A (SLA) bottom stem
分子名称: GLYCEROL, MAGNESIUM ION, Zika virus stem-loop A (SLA) bottom stem
著者Tipo, J, Gottipati, K, Choi, K.H.
登録日2023-08-08
公開日2024-03-06
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献High-resolution RNA tertiary structures in Zika virus stem-loop A for the development of inhibitory small molecules.
Rna, 30, 2024
8TSV
DownloadVisualize
BU of 8tsv by Molmil
Crystal structure of the Zika virus stem-loop A (SLA) top stem
分子名称: GLYCEROL, SULFATE ION, Zika virus stem-loop A (SLA) top stem
著者Tipo, J, Gottipati, K, Choi, K.H.
登録日2023-08-11
公開日2024-03-06
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献High-resolution RNA tertiary structures in Zika virus stem-loop A for the development of inhibitory small molecules.
Rna, 30, 2024
1YXN
DownloadVisualize
BU of 1yxn by Molmil
Pseudo-atomic model of a fiberless isometric variant of bacteriophage phi29
分子名称: Major head protein
著者Morais, M.C, Choi, K.H, Koti, J.S, Chipman, P.R, Anderson, D.L, Rossmann, M.G.
登録日2005-02-22
公開日2005-04-26
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (7.9 Å)
主引用文献Conservation of the Capsid Structure in Tailed dsDNA Bacteriophages: the Pseudoatomic Structure of phi29
Mol.Cell, 18, 2005
7LYG
DownloadVisualize
BU of 7lyg by Molmil
Zika virus RNA promoter stem-loop A with tRNA-scaffold
分子名称: RNA promoter stem-loop A fused with tRNA
著者Lee, E.H, Choi, K.H.
登録日2021-03-06
公開日2021-05-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.804 Å)
主引用文献Structures of flavivirus RNA promoters suggest two binding modes with NS5 polymerase.
Nat Commun, 12, 2021
7LYF
DownloadVisualize
BU of 7lyf by Molmil
Dengue virus RNA promoter stem-loop A fused with tRNA-scaffold
分子名称: MAGNESIUM ION, RNA promoter stem-loop A fused with tRNA
著者Lee, E.H, Choi, K.H.
登録日2021-03-06
公開日2021-05-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structures of flavivirus RNA promoters suggest two binding modes with NS5 polymerase.
Nat Commun, 12, 2021
8F2N
DownloadVisualize
BU of 8f2n by Molmil
Phi-29 partially-expanded fiberless prohead
分子名称: Major capsid protein
著者Woodson, M.E, Morais, M.C, Scott, S.D, Choi, K.H, Jardine, P.J, Zhang, W.
登録日2022-11-08
公開日2023-11-15
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Phi-29 partially-expanded fiberless prohead
To Be Published
4H9J
DownloadVisualize
BU of 4h9j by Molmil
Crystal structure of N-terminal protease (Npro) of classical swine fever virus.
分子名称: Hog cholera virus
著者Gottipati, K, Ruggli, N, Gerber, M, Tratschin, J.-D, Benning, M, Bellamy, H, Choi, K.H.
登録日2012-09-24
公開日2013-10-30
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Structure of Classical Swine Fever Virus N(pro): A Novel Cysteine Autoprotease and Zinc-Binding Protein Involved in Subversion of Type I Interferon Induction.
Plos Pathog., 9, 2013
4I1T
DownloadVisualize
BU of 4i1t by Molmil
Crystal structure of the cap-snatching endonuclease from Pichinde virus
分子名称: RNA-directed RNA polymerase L
著者Bussetta, C, Choi, K.H.
登録日2012-11-21
公開日2014-02-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the cap-snatching endonuclease from Pichinde virus, a new world arenavirus
To be Published
4H9K
DownloadVisualize
BU of 4h9k by Molmil
Crystal structure of cleavage site mutant of Npro of classical swine fever virus.
分子名称: Hog cholera virus, SULFATE ION, ZINC ION
著者Gottipati, K, Ruggli, N, Gerber, M, Tratschin, J.-D, Benning, M, Bellamy, H, Choi, K.H.
登録日2012-09-24
公開日2013-10-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献The Structure of Classical Swine Fever Virus N(pro): A Novel Cysteine Autoprotease and Zinc-Binding Protein Involved in Subversion of Type I Interferon Induction.
Plos Pathog., 9, 2013
6VG5
DownloadVisualize
BU of 6vg5 by Molmil
DengueV-2 Capsid ST148 inhibitor Complex
分子名称: 3-amino-N-(5-phenyl-1,3,4-thiadiazol-2-yl)-6,7,8,9-tetrahydro-5H-cyclohepta[b]thieno[3,2-e]pyridine-2-carboxamide, Capsid premembrane protein, GLYCEROL, ...
著者White, M, Xia, H, Shi, P.
登録日2020-01-07
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A cocrystal structure of dengue capsid protein in complex of inhibitor.
Proc.Natl.Acad.Sci.USA, 117, 2020
6V1W
DownloadVisualize
BU of 6v1w by Molmil
NMR Structure of C-terminal Domain of phi29 ATPase
分子名称: DNA packaging protein
著者Mahler, B, Mao, H, Morais, M.C.
登録日2019-11-21
公開日2020-09-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structure of a vestigial nuclease provides insight into the evolution of functional transitions in viral dsDNA packaging motors.
Nucleic Acids Res., 48, 2020
8UO6
DownloadVisualize
BU of 8uo6 by Molmil
HIV-1 Rev Response Element (RRE) Stem-Loop II (SLII)
分子名称: HIV-1 Rev Response Element Stem-Loop II with tRNA scaffold
著者Tipo, J, Gottipati, K, Choi, K.
登録日2023-10-19
公開日2024-06-05
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure of HIV-1 RRE stem-loop II identifies two conformational states of the high-affinity Rev binding site.
Nat Commun, 15, 2024
6VSO
DownloadVisualize
BU of 6vso by Molmil
DengueV-2 Capsid Structure
分子名称: Capsid premembrane protein, GLYCEROL, NITRATE ION
著者White, M, Xia, H, Shi, P.
登録日2020-02-11
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.001 Å)
主引用文献A cocrystal structure of dengue capsid protein in complex of inhibitor.
Proc.Natl.Acad.Sci.USA, 117, 2020
1FJ4
DownloadVisualize
BU of 1fj4 by Molmil
THE STRUCTURE OF BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE I IN COMPLEX WITH THIOLACTOMYCIN, IMPLICATIONS FOR DRUG DESIGN
分子名称: BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE I, THIOLACTOMYCIN
著者Price, A.C, Choi, K, Heath, R.J, Li, Z, White, S.W, Rock, C.O.
登録日2000-08-07
公開日2000-08-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Inhibition of beta-ketoacyl-acyl carrier protein synthases by thiolactomycin and cerulenin. Structure and mechanism.
J.Biol.Chem., 276, 2001
1FJ8
DownloadVisualize
BU of 1fj8 by Molmil
THE STRUCTURE OF BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE I IN COMPLEX WITH CERULENIN, IMPLICATIONS FOR DRUG DESIGN
分子名称: (2S, 3R)-3-HYDROXY-4-OXO-7,10-TRANS,TRANS-DODECADIENAMIDE, BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE I
著者Price, A.C, Choi, K, Heath, R.J, Li, Z, White, S.W, Rock, C.O.
登録日2000-08-07
公開日2000-08-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Inhibition of beta-ketoacyl-acyl carrier protein synthases by thiolactomycin and cerulenin. Structure and mechanism.
J.Biol.Chem., 276, 2001

 

12>

221371

件を2024-06-19に公開中

PDB statisticsPDBj update infoContact PDBjnumon