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1HR2
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BU of 1hr2 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF A MUTANT P4-P6 DOMAIN (DELC209) OF TETRAHYMENA THEMOPHILA GROUP I INTRON.
分子名称: MAGNESIUM ION, P4-P6 DELC209 MUTANT RNA RIBOZYME DOMAIN
著者Juneau, K, Podell, E.R, Harrington, D.J, Cech, T.R.
登録日2000-12-20
公開日2001-04-12
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis of the enhanced stability of a mutant ribozyme domain and a detailed view of RNA--solvent interactions.
Structure, 9, 2001
1GRZ
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BU of 1grz by Molmil
A PREORGANIZED ACTIVE SITE IN THE CRYSTAL STRUCTURE OF THE TETRAHYMENA RIBOZYME
分子名称: LSU R-RNA GROUP I INTRON
著者Golden, B.L, Gooding, A.R, Podell, E.R, Cech, T.R.
登録日1998-09-14
公開日1998-11-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (5 Å)
主引用文献A preorganized active site in the crystal structure of the Tetrahymena ribozyme.
Science, 282, 1998
1GID
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BU of 1gid by Molmil
CRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKING
分子名称: COBALT HEXAMMINE(III), MAGNESIUM ION, P4-P6 RNA RIBOZYME DOMAIN
著者Cate, J.H, Gooding, A.R, Podell, E, Zhou, K, Golden, B.L, Kundrot, C.E, Cech, T.R, Doudna, J.A.
登録日1996-08-22
公開日1996-12-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a group I ribozyme domain: principles of RNA packing.
Science, 273, 1996
6W6W
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BU of 6w6w by Molmil
Cryo-EM structure of CST bound to telomeric single-stranded DNA
分子名称: CST complex subunit CTC1, CST complex subunit STN1, CST complex subunit TEN1, ...
著者Lim, C, Barbour, A.T, Zaug, A.J, Goodrich, K.J, McKay, A.E, Wuttke, D.S, Cech, T.R.
登録日2020-03-17
公開日2020-06-03
最終更新日2020-06-17
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献The structure of human CST reveals a decameric assembly bound to telomeric DNA.
Science, 368, 2020
2I46
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BU of 2i46 by Molmil
Crystal structure of human TPP1
分子名称: Adrenocortical dysplasia protein homolog
著者Wang, F, Podell, E.R, Zaug, A.J, Yang, Y.T, Baciu, P, Else, T, Hammer, G.D, Cech, T.R, Lei, M.
登録日2006-08-21
公開日2006-11-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The POT1-TPP1 telomere complex is a telomerase processivity factor.
Nature, 445, 2007
3KJP
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BU of 3kjp by Molmil
Crystal Structure of hPOT1V2-GGTTAGGGTTAG
分子名称: 5'-D(*G*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*G)-3', Protection of telomeres protein 1
著者Nandakumar, J, Cech, T.R, Podell, E.R.
登録日2009-11-03
公開日2010-01-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献How telomeric protein POT1 avoids RNA to achieve specificity for single-stranded DNA.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KJO
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BU of 3kjo by Molmil
Crystal Structure of hPOT1V2-dTrUd(AGGGTTAG)
分子名称: DNA/RNA (5'-D(*T)-R(P*U)-D(P*AP*GP*GP*GP*TP*TP*AP*G)-3'), Protection of telomeres protein 1
著者Nandakumar, J, Cech, T.R, Podell, E.R.
登録日2009-11-03
公開日2010-01-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献How telomeric protein POT1 avoids RNA to achieve specificity for single-stranded DNA.
Proc.Natl.Acad.Sci.USA, 107, 2010
1X8W
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BU of 1x8w by Molmil
Structure of the Tetrahymena Ribozyme: Base Triple Sandwich and Metal Ion at the Active Site
分子名称: MAGNESIUM ION, Tetrahymena ribozyme RNA
著者Guo, F, Gooding, A.R, Cech, T.R.
登録日2004-08-18
公開日2004-11-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structure of the Tetrahymena ribozyme: base triple sandwich and metal ion at the active site.
Mol.Cell, 16, 2004
1XJV
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BU of 1xjv by Molmil
Crystal structure of human POT1 bound to telomeric single-stranded DNA (TTAGGGTTAG)
分子名称: Protection of telomeres 1, hT10 d(TTAGGGTTAG)
著者Lei, M, Podell, E.R, Cech, T.R.
登録日2004-09-25
公開日2004-12-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structure of human POT1 bound to telomeric single-stranded DNA provides a model for chromosome end-protection
Nat.Struct.Mol.Biol., 11, 2004
2B2A
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BU of 2b2a by Molmil
Crystal Structure of the TEN domain of the Telomerase Reverse Transcriptase
分子名称: Telomerase reverse transcriptase
著者Jacobs, S.A, Podell, E.R, Cech, T.R.
登録日2005-09-18
公開日2006-02-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Crystal structure of the essential N-terminal domain of telomerase reverse transcriptase.
Nat.Struct.Mol.Biol., 13, 2006
1QZG
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BU of 1qzg by Molmil
Crystal structure of Pot1 (protection of telomere)- ssDNA complex
分子名称: Protection of telomeres protein 1, THYMIDINE-5'-PHOSPHATE, telomeric single-stranded DNA
著者Lei, M, Podell, E.R, Baumann, P, Cech, T.R.
登録日2003-09-16
公開日2003-11-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献DNA self-recognition in the structure of Pot1 bound to telomeric single-stranded DNA
Nature, 426, 2003
1QZH
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BU of 1qzh by Molmil
Crystal structure of Pot1 (protection of telomere)- ssDNA complex
分子名称: Protection of telomeres protein 1, telomeric single-stranded DNA
著者Lei, M, Podell, E.R, Baumann, P, Cech, T.R.
登録日2003-09-16
公開日2003-11-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献DNA self-recognition in the structure of Pot1 bound to telomeric single-stranded DNA
Nature, 426, 2003
4NBO
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BU of 4nbo by Molmil
Human steroid receptor RNA activator protein carboxy-terminal domain
分子名称: Steroid receptor RNA activator 1
著者Mckay, D.B, Xi, L, Barthel, K.K.B, Cech, T.C.
登録日2013-10-23
公開日2014-02-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.807 Å)
主引用文献Structure and function of steroid receptor RNA activator protein, the proposed partner of SRA noncoding RNA.
J.Mol.Biol., 426, 2014
8FYH
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BU of 8fyh by Molmil
G4 RNA-mediated PRC2 dimer
分子名称: G4 RNA, Histone-binding protein RBBP4, Histone-lysine N-methyltransferase EZH2, ...
著者Song, J, Kasinath, V.
登録日2023-01-26
公開日2023-10-04
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for inactivation of PRC2 by G-quadruplex RNA.
Science, 381, 2023
6BJX
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BU of 6bjx by Molmil
Group I self-splicing intron P4-P6 domain mutant U131A (with isopropanol soaking)
分子名称: Group I self-splicing intron P4-P6 domain, MAGNESIUM ION
著者Shoffner, G.M.
登録日2017-11-07
公開日2018-07-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献In Crystallo Selection to Establish New RNA Crystal Contacts.
Structure, 26, 2018
6D8M
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BU of 6d8m by Molmil
Group I self-splicing intron P4-P6 domain mutant A125U/G126U
分子名称: Group I self-splicing intron, MAGNESIUM ION
著者Shoffner, G.M.
登録日2018-04-26
公開日2018-07-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献In Crystallo Selection to Establish New RNA Crystal Contacts.
Structure, 26, 2018
6D8O
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BU of 6d8o by Molmil
Group I self-splicing intron P4-P6 domain mutant A230U
分子名称: Group I self-splicing intron, MAGNESIUM ION
著者Shoffner, G.M.
登録日2018-04-26
公開日2018-07-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.80112481 Å)
主引用文献In Crystallo Selection to Establish New RNA Crystal Contacts.
Structure, 26, 2018
6D8L
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BU of 6d8l by Molmil
Group I self-splicing intron P4-P6 domain mutant U131A (without isopropanol soaking)
分子名称: Group I self-splicing intron, MAGNESIUM ION
著者Shoffner, G.M.
登録日2018-04-26
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.1402154 Å)
主引用文献In Crystallo Selection to Establish New RNA Crystal Contacts.
Structure, 26, 2018
6D8N
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BU of 6d8n by Molmil
Group I self-splicing intron P4-P6 domain mutant G134A/U185AA
分子名称: Group I self-splicing intron, MAGNESIUM ION
著者Shoffner, G.M.
登録日2018-04-26
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.95427132 Å)
主引用文献In Crystallo Selection to Establish New RNA Crystal Contacts.
Structure, 26, 2018
376D
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BU of 376d by Molmil
A ZIPPER-LIKE DNA DUPLEX D(GCGAAAGCT)
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*GP*(CBR)P*GP*AP*AP*AP*GP*CP*T)-3')
著者Cruse, W.B.T, Shepard, W, Prange, T, delalFortelle, E, Fourme, R.
登録日1998-01-22
公開日1999-10-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A zipper-like duplex in DNA: the crystal structure of d(GCGAAAGCT) at 2.1 A resolution.
Structure, 6, 1998
1WTB
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BU of 1wtb by Molmil
Complex structure of the C-terminal RNA-binding domain of hnRNP D (AUF1) with telomere DNA
分子名称: 5'-D(P*TP*AP*GP*G)-3', Heterogeneous nuclear ribonucleoprotein D0
著者Enokizono, Y, Konishi, Y, Nagata, K, Ouhashi, K, Uesugi, S, Ishikawa, F, Katahira, M.
登録日2004-11-22
公開日2005-04-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of hnRNP D complexed with single-stranded telomere DNA and unfolding of the quadruplex by heterogeneous nuclear ribonucleoprotein D
J.Biol.Chem., 280, 2005
1X0F
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BU of 1x0f by Molmil
Complex structure of the C-terminal RNA-binding domain of hnRNP D(AUF1) with telomeric DNA
分子名称: 5'-D(P*TP*AP*GP*G)-3', Heterogeneous nuclear ribonucleoprotein D0
著者Enokizono, Y, Konishi, Y, Nagata, K, Ouhashi, K, Uesugi, S, Ishikawa, F, Katahira, M.
登録日2005-03-22
公開日2005-04-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of hnRNP D complexed with single-stranded telomere DNA and unfolding of the quadruplex by heterogeneous nuclear ribonucleoprotein D.
J.Biol.Chem., 280, 2005
1ZZN
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BU of 1zzn by Molmil
Crystal structure of a group I intron/two exon complex that includes all catalytic metal ion ligands.
分子名称: 197-MER, 5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*GP*AP*CP*GP*GP*CP*C)-3', 5'-R(*CP*AP*(5MU))-3', ...
著者Stahley, M.R, Strobel, S.A.
登録日2005-06-14
公開日2005-08-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.37 Å)
主引用文献Structural evidence for a two-metal-ion mechanism of group I intron splicing.
Science, 309, 2005
1U6B
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BU of 1u6b by Molmil
CRYSTAL STRUCTURE OF A SELF-SPLICING GROUP I INTRON WITH BOTH EXONS
分子名称: 197-MER, 5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*GP*AP*CP*GP *GP*CP*C)-3', 5'-R(*CP*AP*(5MU))-3', ...
著者Adams, P.L, Stahley, M.R, Kosek, A.B, Wang, J, Strobel, S.A.
登録日2004-07-29
公開日2004-08-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal Structure of a Self-Splicing Group I Intron with Both Exons.
Nature, 430, 2004
1IQT
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BU of 1iqt by Molmil
Solution structure of the C-terminal RNA-binding domain of heterogeneous nuclear ribonucleoprotein D0 (AUF1)
分子名称: heterogeneous nuclear ribonucleoprotein D0
著者Katahira, M, Miyanoiri, Y, Enokizono, Y, Matsuda, G, Nagata, T, Ishikawa, F, Uesugi, S.
登録日2001-08-01
公開日2002-08-07
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure of the C-terminal RNA-binding domain of hnRNP D0 (AUF1), its interactions with RNA and DNA, and change in backbone dynamics upon complex formation with DNA.
J.Mol.Biol., 311, 2001

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