Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5CCA
DownloadVisualize
BU of 5cca by Molmil
Crystal structure of Mtb toxin
分子名称: Endoribonuclease MazF3
著者Cascio, D, Arbing, M, de Serrano, V, Eisenberg, D, Miallau, L, TB Structural Genomics Consortium (TBSGC)
登録日2015-07-01
公開日2016-09-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of Mtb toxin
To Be Published
5HRY
DownloadVisualize
BU of 5hry by Molmil
Computationally Designed Cyclic Dimer ank3C2_1
分子名称: ank3C2_1
著者Cascio, D, McNamara, D.E, Fallas, J.A, Baker, D, Yeates, T.O.
登録日2016-01-24
公開日2017-04-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Computational design of self-assembling cyclic protein homo-oligomers.
Nat Chem, 9, 2017
5HRZ
DownloadVisualize
BU of 5hrz by Molmil
Computationally Designed Trimer 1na0C3_3
分子名称: TPR domain protein 1na0C3_3
著者Cascio, D, McNamara, D.E, Fallas, J.A, Baker, D, Yeates, T.O.
登録日2016-01-24
公開日2017-04-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Computational design of self-assembling cyclic protein homo-oligomers.
Nat Chem, 9, 2017
4U9P
DownloadVisualize
BU of 4u9p by Molmil
Structure of the methanofuran/methanopterin biosynthetic enzyme MJ1099 from Methanocaldococcus jannaschii
分子名称: GLYCEROL, UPF0264 protein MJ1099
著者Bobik, T.A, Morales, E, Shin, A, Cascio, D, Sawaya, M.R, Arbing, M, Rasche, M.E.
登録日2014-08-06
公開日2014-11-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of the methanofuran/methanopterin-biosynthetic enzyme MJ1099 from Methanocaldococcus jannaschii.
Acta Crystallogr.,Sect.F, 70, 2014
3AL1
DownloadVisualize
BU of 3al1 by Molmil
DESIGNED PEPTIDE ALPHA-1, RACEMIC P1BAR FORM
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ETHANOLAMINE, PROTEIN (D, ...
著者Patterson, W.R, Anderson, D.H, Degrado, W.F, Cascio, D, Eisenberg, D.
登録日1998-10-26
公開日1998-11-04
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (0.75 Å)
主引用文献Centrosymmetric bilayers in the 0.75 A resolution structure of a designed alpha-helical peptide, D,L-Alpha-1.
Protein Sci., 8, 1999
3JRG
DownloadVisualize
BU of 3jrg by Molmil
Crystal structure of Fis bound to 27 bp non consensus sequence DNA F18
分子名称: DNA (27-MER), DNA-binding protein fis
著者Stella, S, Cascio, D, Johnson, R.C.
登録日2009-09-08
公開日2010-04-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
3JRE
DownloadVisualize
BU of 3jre by Molmil
Crystal structure of Fis bound to 27 bp DNA F26 containing A-tract at center
分子名称: DNA (27-MER), DNA-binding protein fis
著者Stella, S, Cascio, D, Johnson, R.C.
登録日2009-09-08
公開日2010-04-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
5K7P
DownloadVisualize
BU of 5k7p by Molmil
MicroED structure of xylanase at 2.3 A resolution
分子名称: Endo-1,4-beta-xylanase 2, IODIDE ION
著者de la Cruz, M.J, Hattne, J, Shi, D, Seidler, P, Rodriguez, J, Reyes, F.E, Sawaya, M.R, Cascio, D, Eisenberg, D, Gonen, T.
登録日2016-05-26
公開日2017-04-05
最終更新日2024-02-28
実験手法ELECTRON CRYSTALLOGRAPHY (2.3 Å)
主引用文献Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.
Nat. Methods, 14, 2017
3RUB
DownloadVisualize
BU of 3rub by Molmil
CRYSTAL STRUCTURE OF THE UNACTIVATED FORM OF RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE FROM TOBACCO REFINED AT 2.0-ANGSTROMS RESOLUTION
分子名称: ASPARAGINE, RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE, FORM III, ...
著者Schreuder, H, Cascio, D, Curmi, P.M.G, Chapman, M.S, Suh, S.W, Eisenberg, D.S.
登録日1990-05-25
公開日1992-10-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the unactivated form of ribulose-1,5-bisphosphate carboxylase/oxygenase from tobacco refined at 2.0-A resolution.
J.Biol.Chem., 267, 1992
2IBP
DownloadVisualize
BU of 2ibp by Molmil
Crystal Structure of Citrate Synthase from Pyrobaculum aerophilum
分子名称: ACETATE ION, Citrate synthase, MAGNESIUM ION
著者Boutz, D.R, Yeates, T.O, Cascio, D.
登録日2006-09-11
公開日2007-05-15
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Discovery of a thermophilic protein complex stabilized by topologically interlinked chains.
J.Mol.Biol., 368, 2007
2IEF
DownloadVisualize
BU of 2ief by Molmil
Structure of the cooperative Excisionase (Xis)-DNA complex reveals a micronucleoprotein filament
分子名称: 15-mer DNA, 19-mer DNA, 34-mer DNA, ...
著者Abbani, M.A, Papagiannis, C.V, Sam, M.D, Cascio, D, Johnson, R.C, Clubb, R.T.
登録日2006-09-18
公開日2007-02-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Structure of the cooperative Xis-DNA complex reveals a micronucleoprotein filament that regulates phage lambda intasome assembly.
Proc.Natl.Acad.Sci.Usa, 104, 2007
1COS
DownloadVisualize
BU of 1cos by Molmil
CRYSTAL STRUCTURE OF A SYNTHETIC TRIPLE-STRANDED ALPHA-HELICAL BUNDLE
分子名称: COILED SERINE
著者Lovejoy, B, Choe, S, Cascio, D, Mcrorie, D.K, Degrado, W, Eisenberg, D.
登録日1993-01-22
公開日1993-10-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a synthetic triple-stranded alpha-helical bundle.
Science, 259, 1993
5K2H
DownloadVisualize
BU of 5k2h by Molmil
Structure of GNNQQNY from yeast prion Sup35 in space group P212121 determined by MicroED
分子名称: Eukaryotic peptide chain release factor GTP-binding subunit
著者Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S.
登録日2016-05-18
公開日2016-09-14
最終更新日2024-03-06
実験手法ELECTRON CRYSTALLOGRAPHY (1.05 Å)
主引用文献Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.
Proc.Natl.Acad.Sci.USA, 113, 2016
1YAC
DownloadVisualize
BU of 1yac by Molmil
THE 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE YCAC GENE PRODUCT FROM ESCHERICHIA COLI REVEALS AN OCTAMERIC HYDROLASE OF UNKNOWN SPECIFICITY
分子名称: YCAC GENE PRODUCT
著者Colovos, C, Cascio, D, Yeates, T.O.
登録日1998-07-29
公開日1999-02-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The 1.8 A crystal structure of the ycaC gene product from Escherichia coli reveals an octameric hydrolase of unknown specificity.
Structure, 6, 1998
4D9J
DownloadVisualize
BU of 4d9j by Molmil
Structure of a 16 nm protein cage designed by fusing symmetric oligomeric domains
分子名称: Designed 16nm tetrahedral protein cage containing Non-haem bromoperoxidase BPO-A2 and Matrix protein 1
著者Lai, Y.-T, Cascio, D, Yeates, T.O.
登録日2012-01-11
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.92 Å)
主引用文献Structure of a 16-nm cage designed by using protein oligomers.
Science, 336, 2012
1RLC
DownloadVisualize
BU of 1rlc by Molmil
CRYSTAL STRUCTURE OF THE UNACTIVATED RIBULOSE 1, 5-BISPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE COMPLEXED WITH A TRANSITION STATE ANALOG, 2-CARBOXY-D-ARABINITOL 1,5-BISPHOSPHATE
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, RIBULOSE 1,5 BISPHOSPHATE CARBOXYLASE/OXYGENASE (LARGE CHAIN), RIBULOSE 1,5 BISPHOSPHATE CARBOXYLASE/OXYGENASE (SMALL CHAIN)
著者Zhang, K.Y.J, Cascio, D, Eisenberg, D.
登録日1993-08-04
公開日1993-10-31
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the unactivated ribulose 1,5-bisphosphate carboxylase/oxygenase complexed with a transition state analog, 2-carboxy-D-arabinitol 1,5-bisphosphate.
Protein Sci., 3, 1994
6E72
DownloadVisualize
BU of 6e72 by Molmil
Structure of Human Transthyretin Val30Met Mutant in Complex with Tafamidis
分子名称: 2-(3,5-dichlorophenyl)-1,3-benzoxazole-6-carboxylic acid, Transthyretin
著者Chung, K, Saelices, L, Sawaya, M.R, Cascio, D, Eisenberg, D.
登録日2018-07-25
公開日2019-07-31
最終更新日2025-04-02
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural Variants of Transthyretin
To Be Published
6E71
DownloadVisualize
BU of 6e71 by Molmil
Structure of Human Transthyretin Val30Met/Thr119Met Mutant
分子名称: DI(HYDROXYETHYL)ETHER, Transthyretin
著者Saelices, L, Chung, K, Sawaya, M.R, Cascio, D, Eisenberg, D.
登録日2018-07-25
公開日2019-07-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Variants of Transthyretin
To Be Published
6E78
DownloadVisualize
BU of 6e78 by Molmil
Structure of Human Transthyretin Asp38Ala Mutant in Complex with Diflunisal
分子名称: 5-(2,4-DIFLUOROPHENYL)-2-HYDROXY-BENZOIC ACID, Transthyretin
著者Chung, K, Saelices, L, Sawaya, M.R, Cascio, D, Eisenberg, D.
登録日2018-07-25
公開日2019-07-31
最終更新日2025-04-02
実験手法X-RAY DIFFRACTION (1.499 Å)
主引用文献Structural Variants of Transthyretin
To Be Published
1BYZ
DownloadVisualize
BU of 1byz by Molmil
DESIGNED PEPTIDE ALPHA-1, P1 FORM
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ...
著者Prive, G.G, Anderson, D.H, Wesson, L, Cascio, D, Eisenberg, D.
登録日1998-10-20
公開日1998-10-28
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Packed protein bilayers in the 0.90 A resolution structure of a designed alpha helical bundle.
Protein Sci., 8, 1999
4UNT
DownloadVisualize
BU of 4unt by Molmil
Induced monomer of the Mcg variable domain
分子名称: IG LAMBDA CHAIN V-II REGION MGC, SULFATE ION
著者Brumshtein, B, Esswein, S.R, Landau, M, Ryan, C.M, Whitelegge, J.P, Phillips, M.L, Cascio, D, Sawaya, M.R, Eisenberg, D.S.
登録日2014-05-30
公開日2014-08-27
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Formation of Amyloid Fibers by Monomeric Light-Chain Variable Domains.
J.Biol.Chem., 289, 2014
1ZWN
DownloadVisualize
BU of 1zwn by Molmil
Crystal structure of spin labeled T4 Lysozyme (V131R1B)
分子名称: 2-HYDROXYETHYL DISULFIDE, AZIDE ION, CHLORIDE ION, ...
著者Fleissner, M.R, Cascio, D, Sawaya, M.R, Hideg, K, Hubbell, W.L.
登録日2005-06-03
公開日2006-10-17
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of spin labeled T4 Lysozyme (V131R1B)
To be Published
1ZUR
DownloadVisualize
BU of 1zur by Molmil
Crystal structure of spin labeled T4 Lysozyme (V131R1F)
分子名称: CHLORIDE ION, Lysozyme, S-[(1-oxyl-2,2,5,5-tetramethyl-4-phenyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate
著者Fleissner, M.R, Cascio, D, Sawaya, M.R, Hideg, K, Hubbell, W.L.
登録日2005-05-31
公開日2006-10-17
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of spin labeled T4 Lysozyme (V131R1F)
To be Published
2A4T
DownloadVisualize
BU of 2a4t by Molmil
Crystal structure of spin labeled T4 Lysozyme (V131R7)
分子名称: 2-HYDROXYETHYL DISULFIDE, AZIDE ION, CHLORIDE ION, ...
著者Fleissner, M.R, Cascio, D, Sawaya, M.R, Hideg, K, Hubbell, W.L.
登録日2005-06-29
公開日2006-06-13
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of spin labeled T4 Lysozyme (V131R7
To be Published
1ZYT
DownloadVisualize
BU of 1zyt by Molmil
Crystal structure of spin labeled T4 Lysozyme (A82R1)
分子名称: 2-HYDROXYETHYL DISULFIDE, AZIDE ION, CHLORIDE ION, ...
著者Fleissner, M.R, Cascio, D, Sawaya, M.R, Hideg, K, Hubbell, W.L.
登録日2005-06-10
公開日2006-08-15
最終更新日2024-10-30
実験手法EPR (1.7 Å), X-RAY DIFFRACTION
主引用文献Structural origin of weakly ordered nitroxide motion in spin-labeled proteins
Protein Sci., 18, 2009

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon