Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5DGD
DownloadVisualize
BU of 5dgd by Molmil
Benzoylformate decarboxylase F464I and A460V mutant from Pseudomonas putida
分子名称: Benzoylformate decarboxylase, CALCIUM ION, MAGNESIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2015-08-27
公開日2015-09-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Benzoylformate decarboxylase F464I and A460V mutant from Pseudomonas putida
to be published
1YNO
DownloadVisualize
BU of 1yno by Molmil
High Resolution Structure of Benzoylformate Decarboxylase from Pseudomonas Putida Complexed with Thiamine Thiazolone Diphosphate
分子名称: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2005-01-24
公開日2006-01-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献High Resolution Structure of Benzoylformate Decarboxylase from Pseudomonas Putida Complexed with Thiamine Thiazolone Diphosphate;
To be Published
1PI3
DownloadVisualize
BU of 1pi3 by Molmil
E28Q mutant Benzoylformate Decarboxylase From Pseudomonas Putida
分子名称: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2003-05-29
公開日2004-11-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献High resolution structure of Benzoylformate Decarboxylate E28Q mutant
To be Published
1PO7
DownloadVisualize
BU of 1po7 by Molmil
HIGH RESOLUTION STRUCTURE OF E28A MUTANT BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA
分子名称: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2003-06-13
公開日2004-11-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献High Resolution Structure of E28A Mutant Benzoylformate Decarboxylase from Pseudomonas Putida
To be Published
1Q6Z
DownloadVisualize
BU of 1q6z by Molmil
HIGH RESOLUTION STRUCTURE OF E28A MUTANT BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA COMPLEXED WITH THIAMIN THIAZOLONE DIPHOSPHATE
分子名称: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2003-08-14
公開日2004-11-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献High Resolution Structure of E28A Mutant Benzoylformate Decarboxylase from Pseudomonas Putida Complexed with Thiamin Thiazolone Diphosphate
To be Published
5T13
DownloadVisualize
BU of 5t13 by Molmil
Structure of the Cyanuric Acid Hydrolase TrzD Reveals Product Exit Channel
分子名称: CARBON DIOXIDE, Cyanuric acid amidohydrolase, MAGNESIUM ION
著者Bera, A.K, Wackett, L.P.
登録日2016-08-17
公開日2017-04-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structure of the Cyanuric Acid Hydrolase TrzD Reveals Product Exit Channel.
Sci Rep, 7, 2017
6O36
DownloadVisualize
BU of 6o36 by Molmil
Crystal structure of human KRAS P34R mutant in complex with GNP
分子名称: GTPase KRas, MAGNESIUM ION, PHOSPHATE ION, ...
著者Bera, A.K, Westover, K.D.
登録日2019-02-26
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献GTP hydrolysis is modulated by Arg34 in the RASopathy-associated KRASP34R.
Birth Defects Res, 112, 2020
6O46
DownloadVisualize
BU of 6o46 by Molmil
Crystal structure of human KRAS P34R mutant in complex with GNP and Phosphate
分子名称: GTPase KRas, MAGNESIUM ION, PHOSPHATE ION, ...
著者Bera, A.K, Westover, K.D.
登録日2019-02-28
公開日2020-03-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献GTP hydrolysis is modulated by Arg34 in the RASopathy-associated KRASP34R.
Birth Defects Res, 112, 2020
1P4A
DownloadVisualize
BU of 1p4a by Molmil
Crystal Structure of the PurR complexed with cPRPP
分子名称: 1-ALPHA-PYROPHOSPHORYL-2-ALPHA,3-ALPHA-DIHYDROXY-4-BETA-CYCLOPENTANE-METHANOL-5-PHOSPHATE, Pur operon repressor
著者Bera, A.K, Zhu, J, Zalkin, H, Smith, J.L.
登録日2003-04-22
公開日2003-12-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Functional dissection of the Bacillus subtilis pur operator site.
J.Bacteriol., 185, 2003
6MQT
DownloadVisualize
BU of 6mqt by Molmil
HRAS G12S in complex with GDP
分子名称: GTPase HRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Bera, A.K, Westover, K.D.
登録日2018-10-10
公開日2020-04-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.498 Å)
主引用文献HRAS G12S in complex with GDP
To Be Published
6MTA
DownloadVisualize
BU of 6mta by Molmil
KRAS P34R mutant structure in complex with GTP analogue
分子名称: GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Bera, A.K, Westover, K.D.
登録日2018-10-19
公開日2020-04-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献GTP hydrolysis is modulated by Arg34 in the RASopathy-associated KRASP34R.
Birth Defects Res, 112, 2020
6MQN
DownloadVisualize
BU of 6mqn by Molmil
Crystal structure of KRAS V14I-GDP demonstrating disorder switch 1 conformation - Form 2
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE
著者Bera, A.K, Westover, K.D.
登録日2018-10-10
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis of the atypical activation mechanism of KRASV14I.
J.Biol.Chem., 294, 2019
6MS9
DownloadVisualize
BU of 6ms9 by Molmil
GDP-bound KRAS P34R mutant
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Bera, A.K, Westover, K.D.
登録日2018-10-16
公開日2020-04-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献GTP hydrolysis is modulated by Arg34 in the RASopathy-associated KRASP34R.
Birth Defects Res, 112, 2020
6MQG
DownloadVisualize
BU of 6mqg by Molmil
Crystal structure of KRAS V14I-GDP demonstrating open switch 1 conformation - Form 1
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE
著者Bera, A.K, Westover, K.D.
登録日2018-10-09
公開日2019-07-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis of the atypical activation mechanism of KRASV14I.
J.Biol.Chem., 294, 2019
5DEI
DownloadVisualize
BU of 5dei by Molmil
BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA
分子名称: BICARBONATE ION, Benzoylformate decarboxylase, CALCIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2015-08-25
公開日2015-09-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA
to be published
5DGT
DownloadVisualize
BU of 5dgt by Molmil
BENZOYLFORMATE DECARBOXYLASE H70A MUTANT at pH 8.5 FROM PSEUDOMONAS PUTIDA
分子名称: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2015-08-28
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.081 Å)
主引用文献BENZOYLFORMATE DECARBOXYLASE H70A MUTANT at pH 8.5 FROM PSEUDOMONAS PUTIDA
to be published
3L2K
DownloadVisualize
BU of 3l2k by Molmil
Structure of phenazine antibiotic biosynthesis protein with substrate
分子名称: EhpF, phenazine-1,6-dicarboxylic acid
著者Bera, A.K, Atanasova, V, Parsons, J.F.
登録日2009-12-15
公開日2010-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the D-alanylgriseoluteic acid biosynthetic protein EhpF, an atypical member of the ANL superfamily of adenylating enzymes.
Acta Crystallogr.,Sect.D, 66, 2010
2FN3
DownloadVisualize
BU of 2fn3 by Molmil
High resolution structure of s26a mutant of benzoylformate decarboxylase from pseudomonas putida complexed with thiamine thiazolone diphosphate
分子名称: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2006-01-10
公開日2006-12-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献High resolution structure of benzoylformate decarboxylase active site mutant s26a from pseudomonas putida complexed with thiamine thiazolone diphosphate
To be Published
2FWN
DownloadVisualize
BU of 2fwn by Molmil
Phosphorylation of an active site serine in a ThDP-dependent enzyme by phosphonate inactivation
分子名称: Benzoylformate decarboxylase, CALCIUM ION, MAGNESIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2006-02-02
公開日2006-12-19
最終更新日2021-08-04
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Mechanism-based inactivation of benzoylformate decarboxylase, a thiamin diphosphate-dependent enzyme
J.Am.Chem.Soc., 129, 2007
3H77
DownloadVisualize
BU of 3h77 by Molmil
Crystal structure of Pseudomonas aeruginosa PqsD in a covalent complex with anthranilate
分子名称: Anthraniloyl-coenzyme A, PQS biosynthetic enzyme
著者Bera, A.K, Atanasova, V, Parsons, J.F.
登録日2009-04-24
公開日2009-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of PqsD, a Pseudomonas quinolone signal biosynthetic enzyme, in complex with anthranilate.
Biochemistry, 48, 2009
3H78
DownloadVisualize
BU of 3h78 by Molmil
Crystal structure of Pseudomonas aeruginosa PqsD C112A mutant in complex with anthranilic acid
分子名称: 2-AMINOBENZOIC ACID, PQS biosynthetic enzyme
著者Bera, A.K, Atanasova, V, Parsons, J.F.
登録日2009-04-24
公開日2009-09-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of PqsD, a Pseudomonas quinolone signal biosynthetic enzyme, in complex with anthranilate.
Biochemistry, 48, 2009
3H76
DownloadVisualize
BU of 3h76 by Molmil
Crystal structure of PqsD, a key enzyme in Pseudomonas aeruginosa quinolone signal biosynthesis pathway
分子名称: PQS biosynthetic enzyme
著者Bera, A.K, Atanasova, V, Parsons, J.F.
登録日2009-04-24
公開日2009-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of PqsD, a Pseudomonas quinolone signal biosynthetic enzyme, in complex with anthranilate.
Biochemistry, 48, 2009
3HGU
DownloadVisualize
BU of 3hgu by Molmil
Structure of Phenazine Antibiotic Biosynthesis Protein
分子名称: EhpF
著者Bera, A.K, Atanasova, V, Parsons, J.F.
登録日2009-05-14
公開日2010-04-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of the D-alanylgriseoluteic acid biosynthetic protein EhpF, an atypical member of the ANL superfamily of adenylating enzymes.
Acta Crystallogr. D Biol. Crystallogr., 66, 2010
3HGV
DownloadVisualize
BU of 3hgv by Molmil
Structure of Phenazine Antibiotic Biosynthesis Protein
分子名称: EhpF
著者Bera, A.K, Atanasova, V, Parsons, J.F.
登録日2009-05-14
公開日2010-04-28
最終更新日2018-08-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the D-alanylgriseoluteic acid biosynthetic protein EhpF, an atypical member of the ANL superfamily of adenylating enzymes.
Acta Crystallogr. D Biol. Crystallogr., 66, 2010
6W40
DownloadVisualize
BU of 6w40 by Molmil
An enumerative algorithm for de novo design of proteins with diverse pocket structures
分子名称: DENOVO NTF2
著者Bera, A.K, Basanta, B, Sankaran, B, Baker, D.
登録日2020-03-09
公開日2020-04-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献An enumerative algorithm for de novo design of proteins with diverse pocket structures.
Proc.Natl.Acad.Sci.USA, 117, 2020

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon