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1NEV
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BU of 1nev by Molmil
A-tract decamer
分子名称: 5'-D(*CP*CP*GP*TP*TP*TP*TP*GP*CP*C)-3', 5'-D(*GP*GP*CP*AP*AP*AP*AP*CP*GP*G)-3'
著者Barbic, A, Zimmer, D.P, Crothers, D.M.
登録日2002-12-11
公開日2003-03-11
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural origins of adenine-tract bending
Proc.Natl.Acad.Sci.USA, 100, 2003
7OTI
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BU of 7oti by Molmil
Structure of ABCB1/P-glycoprotein in apo state
分子名称: Multidrug resistance protein 1A
著者Ford, R.C, Barbieri, A, Thonghin, N, Shafi, T, Prince, S.M, Collins, R.F.
登録日2021-06-10
公開日2021-12-08
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of ABCB1/P-Glycoprotein in the Presence of the CFTR Potentiator Ivacaftor.
Membranes (Basel), 11, 2021
7OTG
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BU of 7otg by Molmil
Structure of ABCB1/P-glycoprotein in the presence of the CFTR potentiator ivacaftor
分子名称: Multidrug resistance protein 1A, N-(2,4-di-tert-butyl-5-hydroxyphenyl)-4-oxo-1,4-dihydroquinoline-3-carboxamide
著者Ford, R.C, Barbieri, A, Thonghin, N, Shafi, T, Prince, S.M, Collins, R.F.
登録日2021-06-10
公開日2021-12-08
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (5.4 Å)
主引用文献Structure of ABCB1/P-Glycoprotein in the Presence of the CFTR Potentiator Ivacaftor.
Membranes (Basel), 11, 2021
6BIQ
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BU of 6biq by Molmil
Structure of NlpC2 from Trichomonas vaginalis
分子名称: Clan CA, family C40, NlpC/P60 superfamily cysteine peptidase
著者Pinheiro, J, Simoes-Barbosa, A, Goldstone, D.C.
登録日2017-11-02
公開日2018-11-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The ProtozoanTrichomonas vaginalisTargets Bacteria with Laterally Acquired NlpC/P60 Peptidoglycan Hydrolases.
Mbio, 9, 2018
6BIO
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BU of 6bio by Molmil
Structure of NlpC1 from Trichomonas vaginalis
分子名称: Clan CA, family C40, NlpC/P60 superfamily cysteine peptidase
著者Pinheiro, J, Simoes-Barbosa, A, Goldstone, D.C.
登録日2017-11-02
公開日2018-11-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The ProtozoanTrichomonas vaginalisTargets Bacteria with Laterally Acquired NlpC/P60 Peptidoglycan Hydrolases.
Mbio, 9, 2018
6BIM
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BU of 6bim by Molmil
Structure of NlpC1 from Trichomonas vaginalis
分子名称: Clan CA, family C40, NlpC/P60 superfamily cysteine peptidase
著者Pinheiro, J, Simoes-Barbosa, A, Goldstone, D.C.
登録日2017-11-02
公開日2018-11-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.547 Å)
主引用文献The ProtozoanTrichomonas vaginalisTargets Bacteria with Laterally Acquired NlpC/P60 Peptidoglycan Hydrolases.
Mbio, 9, 2018
2IX1
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BU of 2ix1 by Molmil
RNase II D209N mutant
分子名称: 5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP *AP*AP*A)-3', EXORIBONUCLEASE 2, MAGNESIUM ION
著者Frazao, C, McVey, C.E, Amblar, M, Barbas, A, Vonrhein, C, Arraiano, C.M, Carrondo, M.A.
登録日2006-07-05
公開日2006-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Unravelling the Dynamics of RNA Degradation by Ribonuclease II and its RNA-Bound Complex
Nature, 443, 2006
2IX0
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BU of 2ix0 by Molmil
RNase II
分子名称: CALCIUM ION, CYTIDINE-5'-MONOPHOSPHATE, EXORIBONUCLEASE 2, ...
著者Frazao, C, Mcvey, C.E, Amblar, M, Barbas, A, Vonrhein, C, Arraiano, C.M, Carrondo, M.A.
登録日2006-07-05
公開日2006-10-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Unravelling the Dynamics of RNA Degradation by Ribonuclease II and its RNA-Bound Complex
Nature, 7, 2006
6Q81
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BU of 6q81 by Molmil
Structure of P-glycoprotein(ABCB1) in the post-hydrolytic state
分子名称: ADENOSINE-5'-DIPHOSPHATE, P-glycoprotein (ABCB1)
著者Ford, R.C, Thonghin, N, Collins, R.F, Barbieri, A, Shafi, T, Siebert, A.
登録日2018-12-13
公開日2018-12-26
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.9 Å)
主引用文献Novel features in the structure of P-glycoprotein (ABCB1) in the post-hydrolytic state as determined at 7.9 angstrom resolution.
Bmc Struct.Biol., 18, 2018
4UU4
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BU of 4uu4 by Molmil
Crystal structure of LptH, the LptA homologous periplasmic component of the conserved lipopolysaccharide transport device from Pseudomonas aeruginosa
分子名称: PERIPLASMIC LIPOPOLYSACCHARIDE TRANSPORT PROTEIN LPTH
著者Bollati, M, Villa, R, Gourlay, L.J, Barbiroli, A, Deho, G, Benedet, M, Polissi, A, Martorana, A, Sperandeo, P, Bolognesi, M, Nardini, M.
登録日2014-07-24
公開日2015-03-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.751 Å)
主引用文献Crystal Structure of Lpth, the Periplasmic Component of the Lipopolysaccharide Transport Machinery from Pseudomonas Aeruginosa.
FEBS J., 282, 2015
6Y2K
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BU of 6y2k by Molmil
Crystal structure of beta-galactosidase from the psychrophilic Marinomonas ef1
分子名称: CHLORIDE ION, GLYCEROL, beta-galactosidase
著者Mangiagalli, M, Lapi, M, Maione, S, Orlando, M, Brocca, S, Pesce, A, Barbiroli, A, Pucciarelli, S, Camilloni, C, Lotti, M.
登録日2020-02-16
公開日2020-05-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The co-existence of cold activity and thermal stability in an Antarctic GH42 beta-galactosidase relies on its hexameric quaternary arrangement.
Febs J., 288, 2021
5L8S
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BU of 5l8s by Molmil
The crystal structure of a cold-adapted acylaminoacyl peptidase reveals a novel quaternary architecture based on the arm-exchange mechanism
分子名称: Amino acyl peptidase, SULFATE ION
著者Brocca, S, Ferrari, C, Barbiroli, A, Pesce, A, Lotti, M, Nardini, M.
登録日2016-06-08
公開日2016-11-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A bacterial acyl aminoacyl peptidase couples flexibility and stability as a result of cold adaptation.
FEBS J., 283, 2016
6GDI
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BU of 6gdi by Molmil
Structure of P-glycoprotein(ABCB1) in the post-hydrolytic state
分子名称: Multidrug resistance protein 1A
著者Ford, R.C, Thonghin, N, Collins, R.F, Barbieri, A, Shafi, T, Siebert, A.
登録日2018-04-23
公開日2018-05-23
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.9 Å)
主引用文献Novel features in the structure of P-glycoprotein (ABCB1) in the post-hydrolytic state as determined at 7.9 angstrom resolution.
Bmc Struct.Biol., 18, 2018
6BHQ
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BU of 6bhq by Molmil
Mouse Immunoglobulin G 2c Fc fragment with complex-type glycan
分子名称: GLYCEROL, Igh protein, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Falconer, D, Barb, A.
登録日2017-10-31
公開日2018-02-14
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Mouse IgG2c Fc loop residues promote greater receptor-binding affinity than mouse IgG2b or human IgG1.
PLoS ONE, 13, 2018
6BHY
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BU of 6bhy by Molmil
Mouse Immunoglobulin G 2c Fc fragment with single GlcNAc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Igh protein, SODIUM ION
著者Falconer, D, Barb, A.
登録日2017-10-31
公開日2018-02-14
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Mouse IgG2c Fc loop residues promote greater receptor-binding affinity than mouse IgG2b or human IgG1.
PLoS ONE, 13, 2018
4RMW
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BU of 4rmw by Molmil
Crystal structure of the D76A Beta-2 Microglobulin mutant
分子名称: ACETATE ION, Beta-2-microglobulin, TRIETHYLENE GLYCOL
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-10-22
公開日2015-11-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
4RMU
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BU of 4rmu by Molmil
Crystal structure of the D76E Beta-2 Microglobulin mutant
分子名称: Beta-2-microglobulin, TRIETHYLENE GLYCOL
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-10-22
公開日2015-11-18
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
4RMV
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BU of 4rmv by Molmil
Crystal structure of the D76H Beta-2 Microglobulin mutant
分子名称: ACETATE ION, Beta-2-microglobulin, TRIETHYLENE GLYCOL
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-10-22
公開日2015-11-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.463 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
8EV5
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BU of 8ev5 by Molmil
NlpC B3 covalently bound with E64 inhibitor fragment
分子名称: Clan CA, family C40, NlpC/P60 superfamily cysteine peptidase, ...
著者Barnett, M.J, Goldstone, D.C.
登録日2022-10-19
公開日2023-09-06
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献NlpC/P60 peptidoglycan hydrolases of Trichomonas vaginalis have complementary activities that empower the protozoan to control host-protective lactobacilli.
Plos Pathog., 19, 2023
8EV4
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BU of 8ev4 by Molmil
NlpC B3 - Trichomonas Vaginalis
分子名称: Clan CA, family C40, NlpC/P60 superfamily cysteine peptidase
著者Barnett, M.J, Goldstone, D.C.
登録日2022-10-19
公開日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献NlpC/P60 peptidoglycan hydrolases of Trichomonas vaginalis have complementary activities that empower the protozoan to control host-protective lactobacilli.
Plos Pathog., 19, 2023
5CSG
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BU of 5csg by Molmil
The crystal structure of beta2-microglobulin R97Q mutant
分子名称: ACETATE ION, Beta-2-microglobulin
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2015-07-23
公開日2016-08-10
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
5CSB
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BU of 5csb by Molmil
The crystal structure of beta2-microglobulin D76N mutant at room temperature
分子名称: Beta-2-microglobulin
著者de Rosa, M, Mota, C.S, de Sanctis, D, Bolognesi, M, Ricagno, S.
登録日2015-07-23
公開日2016-08-10
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.719 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
5CS7
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BU of 5cs7 by Molmil
The crystal structure of wt beta2-microglobulin at room temperature
分子名称: Beta-2-microglobulin
著者de Rosa, M, Mota, C.S, de Sanctis, D, Bolognesi, M, Ricagno, S.
登録日2015-07-23
公開日2016-08-10
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
6I8C
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BU of 6i8c by Molmil
Crystal structure of the murine beta-2-microglobulin.
分子名称: Beta-2-microglobulin, TRIETHYLENE GLYCOL
著者Achour, A, Sandalova, T, Ricagno, S, Sun, R.
登録日2018-11-20
公開日2019-10-02
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Biochemical and biophysical comparison of human and mouse beta-2 microglobulin reveals the molecular determinants of low amyloid propensity.
Febs J., 287, 2020
6GRZ
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BU of 6grz by Molmil
Crystal structure of the light chain dimer mH6
分子名称: GLYCEROL, mH6
著者Maritan, M, Ricagno, S, Ambrosetti, A, Oberti, L.
登録日2018-06-13
公開日2019-06-12
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Inherent Biophysical Properties Modulate the Toxicity of Soluble Amyloidogenic Light Chains
J.Mol.Biol., 2020

 

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