Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6W4N
DownloadVisualize
BU of 6w4n by Molmil
Co-crystal structure of Pd_dinase with probe glycine-propargylglycine-AOMK
分子名称: 2-azanyl-~{N}-[(3~{S})-2-oxidanylidenehex-5-yn-3-yl]ethanamide, Aminopeptidase, POTASSIUM ION
著者Xu, J.H, Solania, A, Wolan, D.W.
登録日2020-03-11
公開日2021-03-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.623 Å)
主引用文献Co-crystal structure of Pd_dinase with probe glycine-propargylglycine-AOMK
To Be Published
6PX9
DownloadVisualize
BU of 6px9 by Molmil
Crystal structure of procaspase-8 in complex with covalent small molecule inhibitor 63-R
分子名称: Caspase-8, N-{(3R)-1-[4-(morpholin-4-yl)benzene-1-carbonyl]piperidin-3-yl}-N-phenylacetamide
著者Xu, J.H, Wolan, D.W.
登録日2019-07-25
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Integrative X-ray Structure and Molecular Modeling for the Rationalization of Procaspase-8 Inhibitor Potency and Selectivity.
Acs Chem.Biol., 15, 2020
5Y5D
DownloadVisualize
BU of 5y5d by Molmil
The crystal structure of VrEH2 mutant M263W
分子名称: Epoxide hydrolase
著者Xu, J.H, Yu, H.L, Zhou, J.H, Kong, X.D, Li, F.L.
登録日2017-08-08
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The crystal structure of VrEH2 mutant M263W
To Be Published
5WDK
DownloadVisualize
BU of 5wdk by Molmil
A processive dipeptidyl aminopeptidase secreted from an established commensal bacterium P. distasonis
分子名称: 5-[(3aS,4R,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-N-(2-oxopropyl)pentanamide, Aminopeptidase C, POTASSIUM ION
著者Wolan, D.W, Xu, J.H, Solania, A, Chatterjee, S, Jiang, Z, ODonoghue, A.J.
登録日2017-07-05
公開日2018-07-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献A Commensal Dipeptidyl Aminopeptidase with Specificity for N-Terminal Glycine Degrades Human-Produced Antimicrobial Peptides in Vitro.
Acs Chem.Biol., 13, 2018
5WDL
DownloadVisualize
BU of 5wdl by Molmil
A processive dipeptidyl aminopeptidase secreted from an established commensal bacterium P. distasonis
分子名称: Aminopeptidase C, N-[(3S)-6-carbamimidamido-2-oxohexan-3-yl]glycinamide, POTASSIUM ION
著者Wolan, D.W, Xu, J.H, Solania, A, Chatterjee, S, Jiang, Z, ODonoghue, A.J.
登録日2017-07-05
公開日2018-07-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.625 Å)
主引用文献A Commensal Dipeptidyl Aminopeptidase with Specificity for N-Terminal Glycine Degrades Human-Produced Antimicrobial Peptides in Vitro.
Acs Chem.Biol., 13, 2018
4O08
DownloadVisualize
BU of 4o08 by Molmil
Crystal structure of bacillus megaterium epoxide hydrolase in complex with an inhibitor
分子名称: 2-phenoxyacetamide, SULFATE ION, Soluble epoxide hydrolase
著者Kong, X.D, Zhou, J.H, Xu, J.H.
登録日2013-12-13
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Engineering of an epoxide hydrolase for efficient bioresolution of bulky pharmaco substrates.
Proc.Natl.Acad.Sci.USA, 111, 2014
5XM6
DownloadVisualize
BU of 5xm6 by Molmil
the overall structure of VrEH2
分子名称: Epoxide hydrolase
著者Li, F.L, Kong, X.D, Yu, H.L, Shang, Y.P, Zhou, J.H, Xu, J.H.
登録日2017-05-12
公開日2018-09-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Regioselectivity Engineering of Epoxide Hydrolase: Near-Perfect Enantioconvergence through a Single Site Mutation
Acs Catalysis, 8, 2018
4EEZ
DownloadVisualize
BU of 4eez by Molmil
Crystal Structure of Lactococcus lactis Alcohol Dehydrogenase variant RE1
分子名称: Alcohol dehydrogenase 1, TETRAETHYLENE GLYCOL, ZINC ION
著者Liu, X, Bastian, S, Snow, C.D, Brustad, E.M, Saleski, T, Xu, J.H, Meinhold, P, Arnold, F.H.
登録日2012-03-28
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-guided engineering of Lactococcus lactis alcohol dehydrogenase LlAdhA for improved conversion of isobutyraldehyde to isobutanol.
J.Biotechnol., 164, 2012
4EEX
DownloadVisualize
BU of 4eex by Molmil
Crystal Structure of Lactococcus lactis Alcohol Dehydrogenase
分子名称: Alcohol dehydrogenase 1, TETRAETHYLENE GLYCOL, ZINC ION
著者Liu, X, Bastian, S, Snow, C.D, Brustad, E.M, Saleski, T, Xu, J.H, Meinhold, P, Arnold, F.H.
登録日2012-03-28
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-guided engineering of Lactococcus lactis alcohol dehydrogenase LlAdhA for improved conversion of isobutyraldehyde to isobutanol.
J.Biotechnol., 164, 2012
5XMD
DownloadVisualize
BU of 5xmd by Molmil
Crystal structure of epoxide hydrolase VrEH1 from Vigna radiata
分子名称: Epoxide hydrolase A
著者Kong, X.D, Xu, J.H, Zhou, J.H.
登録日2017-05-14
公開日2018-05-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Carboxyl reductase
to be published
4XUK
DownloadVisualize
BU of 4xuk by Molmil
Crystal structure of hydrolase AbOPH in beta lactamase superfamily
分子名称: Putative hydrolase, ZINC ION
著者Chen, J, Xu, J.H, Zhou, J.H.
登録日2015-01-26
公開日2015-10-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Marked enhancement of Acinetobacter sp. organophosphorus hydrolase activity by a single residue substitution Ile211Ala
Bioresour Bioprocess, 2015
8WNH
DownloadVisualize
BU of 8wnh by Molmil
Crystal structure of cis-epoxysuccinate hydrolase from Rhodococcus opacus
分子名称: Epoxide hydrolase, FORMIC ACID
著者Han, Y, Kong, X.D, Xu, J.H.
登録日2023-10-05
公開日2024-06-12
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.773 Å)
主引用文献Structural Insights of a cis -Epoxysuccinate Hydrolase Facilitate the Development of Robust Biocatalysts for the Production of l-(+)-Tartrate.
Biochemistry, 2024
8WWS
DownloadVisualize
BU of 8wws by Molmil
Crystal structure of cis-epoxysuccinate hydrolase from Klebsiella oxytoca with L(+)-tartaric acid
分子名称: (S)-2-haloacid dehalogenase, 1,2-ETHANEDIOL, CARBONATE ION, ...
著者Han, Y, Kong, X.D, Li, J, Xu, J.H.
登録日2023-10-26
公開日2024-06-12
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural Insights of a cis -Epoxysuccinate Hydrolase Facilitate the Development of Robust Biocatalysts for the Production of l-(+)-Tartrate.
Biochemistry, 2024
8WMT
DownloadVisualize
BU of 8wmt by Molmil
Crystal structure of cis-epoxysuccinic hydrolase from Bradyrhizobium mercantei
分子名称: cis-epoxysuccinic hydrolase
著者Han, Y, Kong, X.D, Xu, J.H.
登録日2023-10-04
公開日2024-06-12
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Insights of a cis -Epoxysuccinate Hydrolase Facilitate the Development of Robust Biocatalysts for the Production of l-(+)-Tartrate.
Biochemistry, 2024
4RNC
DownloadVisualize
BU of 4rnc by Molmil
Crystal structure of an esterase RhEst1 from Rhodococcus sp. ECU1013
分子名称: Esterase, PHOSPHATE ION
著者Dou, S, Kong, X.D, Xu, J.H, Zhou, J.
登録日2014-10-23
公開日2015-10-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Substrate channel evolution of an esterase for the synthesis of Cilastatin
CATALYSIS SCIENCE AND TECHNOLOGY, 5, 2015
6X8H
DownloadVisualize
BU of 6x8h by Molmil
Caspase-8 in complex with AOMK inhibitor, Ac-DW3-KE, forms tetrahedral adduct
分子名称: Ac-DW3-KE, Caspase-8
著者Solania, A, Xu, J.H, Wolan, D.W.
登録日2020-06-01
公開日2021-06-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Caspase-8 in complex with AOMK inhibitor, Ac-DW3-KE, forms tetrahedral adduct
To Be Published
6X8L
DownloadVisualize
BU of 6x8l by Molmil
Caspase-7 in complex with elongated ketomethylene inhibitor
分子名称: Caspase-7, ketomethylene inhibitor
著者Solania, A, Xu, J.H, Wolan, D.W.
登録日2020-06-01
公開日2021-06-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Caspase-7 in complex with elongated ketomethylene inhibitor
To Be Published
6X8K
DownloadVisualize
BU of 6x8k by Molmil
Caspase-3 in complex with elongated ketomethylene inhibitor
分子名称: Caspase-3, ketomethylene inhibitor
著者Solania, A, Xu, J.H, Wolan, D.W.
登録日2020-06-01
公開日2021-06-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Caspase-3 in complex with elongated ketomethylene inhibitor
To Be Published
6X8J
DownloadVisualize
BU of 6x8j by Molmil
Caspase-7 in complex with ketomethylene inhibitor reveals tetrahedral adduct
分子名称: Caspase-7, ketomethylene inhibitor
著者Solania, A, Xu, J.H, Wolan, D.W.
登録日2020-06-01
公開日2021-06-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.604 Å)
主引用文献Caspase-7 in complex with ketomethylene inhibitor reveals tetrahedral adduct
To Be Published
6X8I
DownloadVisualize
BU of 6x8i by Molmil
Caspase-3 in complex with ketomethylene inhibitor reveals tetrahedral adduct
分子名称: Caspase-3, ketomethylene inhibitor
著者Solania, A, Xu, J.H, Wolan, D.W.
登録日2020-06-01
公開日2021-06-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Caspase-3 in complex with ketomethylene inhibitor reveals tetrahedral adduct
To Be Published
4XBX
DownloadVisualize
BU of 4xbx by Molmil
Crystal Structure of the L74F/M78F/L103V/L114V/I116V/F139V/L147V mutant of LEH
分子名称: Limonene-1,2-epoxide hydrolase
著者Kong, X.D, Sun, Z, Xu, J.H, Reetz, M.T, Zhou, J.
登録日2014-12-17
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Reshaping an Enzyme Binding Pocket for Enhanced and Inverted Stereoselectivity: Use of Smallest Amino Acid Alphabets in Directed Evolution
Angew.Chem.Int.Ed.Engl., 54, 2015
4XBT
DownloadVisualize
BU of 4xbt by Molmil
Crystal Structure of the L74F/M78F/L103V/L114V/I116V/F139V/L147V mutant of LEH complexed with (S,S)-cyclohexanediol
分子名称: (1S,2S)-cyclohexane-1,2-diol, CITRATE ANION, Limonene-1,2-epoxide hydrolase
著者Kong, X.D, Sun, Z, Lonsdale, R, Xu, J.H, Reetz, M.T, Zhou, J.
登録日2014-12-17
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Reshaping an Enzyme Binding Pocket for Enhanced and Inverted Stereoselectivity: Use of Smallest Amino Acid Alphabets in Directed Evolution
Angew.Chem.Int.Ed.Engl., 54, 2015
4XDV
DownloadVisualize
BU of 4xdv by Molmil
Crystal Structure of the L74F/M78V/I80V/L114F mutant of LEH complexed with cyclohexanediol
分子名称: (1R,2R)-cyclohexane-1,2-diol, Limonene-1,2-epoxide hydrolase
著者Kong, X.D, Sun, Z, Lonsdale, R, Xu, J.H, Reetz, M.T, Zhou, J.
登録日2014-12-20
公開日2015-07-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Reshaping an Enzyme Binding Pocket for Enhanced and Inverted Stereoselectivity: Use of Smallest Amino Acid Alphabets in Directed Evolution
Angew.Chem.Int.Ed.Engl., 54, 2015
4XBY
DownloadVisualize
BU of 4xby by Molmil
Crystal Structure of the L74F/M78V/I80V/L114F mutant of LEH complexed with cyclopentene oxide
分子名称: (1R,5S)-6-oxabicyclo[3.1.0]hexane, Limonene-1,2-epoxide hydrolase
著者Kong, X.D, Sun, Z, Xu, J.H, Reetz, M.T, Zhou, J.
登録日2014-12-17
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Reshaping an Enzyme Binding Pocket for Enhanced and Inverted Stereoselectivity: Use of Smallest Amino Acid Alphabets in Directed Evolution
Angew.Chem.Int.Ed.Engl., 54, 2015
4OB8
DownloadVisualize
BU of 4ob8 by Molmil
Crystal structure of a novel thermostable esterase from Pseudomonas putida ECU1011
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Alpha/beta hydrolase fold-3 domain protein, DI(HYDROXYETHYL)ETHER
著者Dou, S, Kong, X.D, Ma, B.D, Xu, J.H, Zhou, J.H.
登録日2014-01-07
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Crystal structures of Pseudomonas putida esterase reveal the functional role of residues 187 and 287 in substrate binding and chiral recognition
Biochem.Biophys.Res.Commun., 446, 2014

 

1234>

221371

件を2024-06-19に公開中

PDB statisticsPDBj update infoContact PDBjnumon