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3H1R
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BU of 3h1r by Molmil
Order-disorder structure of fluorescent protein FP480
分子名称: Fluorescent protein FP480
著者Pletnev, S, Morozova, K.S, Verkhusha, V.V, Dauter, Z.
登録日2009-04-13
公開日2009-09-08
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Rotational order-disorder structure of fluorescent protein FP480
Acta Crystallogr.,Sect.D, 65, 2009
3H1O
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BU of 3h1o by Molmil
The Structure of Fluorescent Protein FP480
分子名称: Fluorescent protein FP480, GLYCEROL
著者Pletnev, S, Morozova, K.S, Verkhusha, V.V, Dauter, Z.
登録日2009-04-13
公開日2009-09-08
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rotational order-disorder structure of fluorescent protein FP480
Acta Crystallogr.,Sect.D, 65, 2009
3KCS
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BU of 3kcs by Molmil
Crystal structure of PAmCherry1 in the dark state
分子名称: PAmCherry1 protein
著者Malashkevich, V.N, Subach, F.V, Zencheck, W.D, Xiao, H, Filonov, G.S, Almo, S.C, Verkhusha, V.V.
登録日2009-10-21
公開日2009-11-17
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states.
Proc.Natl.Acad.Sci.USA, 106, 2009
3KCT
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BU of 3kct by Molmil
CRYSTAL STRUCTURE OF PAmCherry1 in the photoactivated state
分子名称: PAmCherry1 protein
著者Malashkevich, V.N, Subach, F.V, Zencheck, W.D, Xiao, H, Filonov, G.S, Almo, S.C, Verkhusha, V.V.
登録日2009-10-21
公開日2009-11-17
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states.
Proc.Natl.Acad.Sci.USA, 106, 2009
3M24
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BU of 3m24 by Molmil
Crystal structure of TagBFP fluorescent protein
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, GLYCEROL, ...
著者Malashkevich, V.N, Subach, O.M, Almo, S.C, Verkhusha, V.V.
登録日2010-03-06
公開日2010-05-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural characterization of acylimine-containing blue and red chromophores in mTagBFP and TagRFP fluorescent proteins.
Chem.Biol., 17, 2010
3M22
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BU of 3m22 by Molmil
Crystal structure of TagRFP fluorescent protein
分子名称: TagRFP
著者Malashkevich, V.N, Subach, O.M, Ramagopal, U.A, Almo, S.C, Verkhusha, V.V.
登録日2010-03-06
公開日2010-05-12
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural characterization of acylimine-containing blue and red chromophores in mTagBFP and TagRFP fluorescent proteins.
Chem.Biol., 17, 2010
7RBW
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BU of 7rbw by Molmil
Structure of Biliverdin-binding Serpin of Boana punctata (polka-dot tree frog)
分子名称: BILIVERDINE IX ALPHA, Biliverdin bindin serpin
著者Fedorov, E, Manoilov, K.Y, Verkhusha, V, Almo, S.C, Ghosh, A.
登録日2021-07-06
公開日2021-11-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural and Functional Characterization of a Biliverdin-Binding Near-Infrared Fluorescent Protein From the Serpin Superfamily.
J.Mol.Biol., 434, 2021
3U8C
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BU of 3u8c by Molmil
Crystal structure of monomeric reversibly photoswitchable red fluorescent protein rsTagRFP in the ON state
分子名称: Fluorescent protein rsTagRFP, GLYCEROL
著者Pletnev, S.
登録日2011-10-16
公開日2012-02-22
最終更新日2012-05-09
実験手法X-RAY DIFFRACTION (2.188 Å)
主引用文献A structural basis for reversible photoswitching of absorbance spectra in red fluorescent protein rsTagRFP.
J.Mol.Biol., 417, 2012
2QIC
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BU of 2qic by Molmil
Crystal Structure of the ING1 PHD Finger in complex with a Histone H3K4ME3 peptide
分子名称: H3K4ME3 PEPTIDE, Inhibitor of growth protein 1, ZINC ION
著者Pena, P.V, Champagne, K, Zhao, R, Kutateladze, T.G.
登録日2007-07-03
公開日2008-05-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Histone H3K4me3 binding is required for the DNA repair and apoptotic activities of ING1 tumor suppressor.
J.Mol.Biol., 380, 2008
4XTQ
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BU of 4xtq by Molmil
Crystal structure of a mutant (C20S) of a near-infrared fluorescent protein BphP1-FP
分子名称: 3-[2-[(Z)-[5-[(Z)-[(3R,4R)-3-ethenyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, BphP1-FP/C20S, CHLORIDE ION
著者Pletnev, S, Malashkevich, V.N.
登録日2015-01-23
公開日2015-12-09
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Molecular Basis of Spectral Diversity in Near-Infrared Phytochrome-Based Fluorescent Proteins.
Chem.Biol., 22, 2015
2G6Q
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BU of 2g6q by Molmil
Crystal structure of ING2 PHD finger in complex with H3K4Me3 peptide
分子名称: H3K4Me3 peptide, Inhibitor of growth protein 2, ZINC ION
著者Pena, P.V, Zhao, R, Kutateladze, T.G.
登録日2006-02-24
公開日2006-07-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2.
Nature, 442, 2006
3U8A
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BU of 3u8a by Molmil
Crystal structure of monomeric reversibly photoswitchable red fluorescent protein rsTagRFP in the OFF state
分子名称: Fluorescent protein rsTagRFP
著者Pletnev, S.
登録日2011-10-16
公開日2012-02-22
最終更新日2012-05-09
実験手法X-RAY DIFFRACTION (1.783 Å)
主引用文献A structural basis for reversible photoswitching of absorbance spectra in red fluorescent protein rsTagRFP.
J.Mol.Biol., 417, 2012
7LSD
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BU of 7lsd by Molmil
Crystal structure of near-infrared fluorescent protein miRFP718nano
分子名称: BILIVERDINE IX ALPHA, miRFP718nano
著者Pletnev, S.
登録日2021-02-18
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Rational design of a small near-infrared fluorescent protein from CBCR suitable for deep-tissue SWIR imaging.
To Be Published
4KGF
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BU of 4kgf by Molmil
Crystal structure of near-infrared fluorescent protein with an extended stokes shift, ph 8.0
分子名称: CHLORIDE ION, TagRFP675, red fluorescent protein
著者Malashkevich, V.N, Piatkevich, K, Almo, S.C, Verkhusha, V, New York Structural Genomics Research Consortium (NYSGRC)
登録日2013-04-29
公開日2013-05-08
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Extended Stokes shift in fluorescent proteins: chromophore-protein interactions in a near-infrared TagRFP675 variant.
Sci Rep, 3, 2013
4KGE
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BU of 4kge by Molmil
Crystal structure of near-infrared fluorescent protein with an extended stokes shift, pH 4.5
分子名称: CHLORIDE ION, TagRFP675, red fluorescent protein
著者Malashkevich, V.N, Piatkevich, K, Almo, S.C, Verkhusha, V, New York Structural Genomics Research Consortium (NYSGRC)
登録日2013-04-29
公開日2013-05-08
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Extended Stokes shift in fluorescent proteins: chromophore-protein interactions in a near-infrared TagRFP675 variant.
Sci Rep, 3, 2013
6MGH
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BU of 6mgh by Molmil
X-ray structure of monomeric near-infrared fluorescent protein miRFP670nano
分子名称: 3-[2-[(~{Z})-[5-[(~{Z})-[(3~{S},4~{R})-3-ethenyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(~{Z})-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, GLYCEROL, ISOPROPYL ALCOHOL, ...
著者Pletnev, S.
登録日2018-09-13
公開日2018-12-19
最終更新日2019-01-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Smallest near-infrared fluorescent protein evolved from cyanobacteriochrome as versatile tag for spectral multiplexing.
Nat Commun, 10, 2019
3NT3
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BU of 3nt3 by Molmil
CRYSTAL STRUCTURE OF LSSmKate2 red fluorescent proteins with large Stokes shift
分子名称: GLYCEROL, LSSmKate2 red fluorescent protein
著者Malashkevich, V.N, Piatkevich, K, Almo, S.C, Verkhusha, V.
登録日2010-07-02
公開日2010-08-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Engineering ESPT Pathways Based on Structural Analysis of LSSmKate Red Fluorescent Proteins with Large Stokes Shift.
J.Am.Chem.Soc., 132, 2010
3NT9
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BU of 3nt9 by Molmil
CRYSTAL STRUCTURE OF LSSmKate1 red fluorescent proteins with large Stokes shift
分子名称: LSSmKate1 red fluorescent protein
著者Malashkevich, V.N, Piatkevich, K, Almo, S.C, Verkhusha, V.
登録日2010-07-03
公開日2010-08-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Engineering ESPT Pathways Based on Structural Analysis of LSSmKate Red Fluorescent Proteins with Large Stokes Shift.
J.Am.Chem.Soc., 132, 2010
5VIV
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BU of 5viv by Molmil
Crystal structure of monomeric near-infrared fluorescent protein miRFP670
分子名称: 3-[2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl] methyl]-5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]pro panoic acid, 3-[5-[[(3~{R},4~{R})-3-ethenyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, CHLORIDE ION, ...
著者Pletnev, S.
登録日2017-04-17
公開日2017-06-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies.
Chem Sci, 8, 2017
5VIQ
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BU of 5viq by Molmil
Crystal structure of monomeric near-infrared fluorescent protein miRFP709
分子名称: BILIVERDINE IX ALPHA, monomeric near-infrared fluorescent protein miRFP709
著者Pletnev, S.
登録日2017-04-17
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies.
Chem Sci, 8, 2017
5VIK
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BU of 5vik by Molmil
Crystal structure of monomeric near-infrared fluorescent protein miRFP703
分子名称: BILIVERDINE IX ALPHA, near-infrared fluorescent protein miRFP703
著者Pletnev, S.
登録日2017-04-17
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies.
Chem Sci, 8, 2017
4KPI
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BU of 4kpi by Molmil
Rotational order-disorder structure of reversibly photoswitchable red fluorescent protein rsTagRFP
分子名称: Reversibly photoswitchable red fluorescent protein rsTagRFP
著者Pletnev, S.
登録日2013-05-13
公開日2014-02-26
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献The rotational order-disorder structure of the reversibly photoswitchable red fluorescent protein rsTagRFP.
Acta Crystallogr.,Sect.D, 70, 2014
4Q7R
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Crystal structure of large Stokes shift fluorescent protein LSSmOrange
分子名称: ACETATE ION, LSSmOrange, ZINC ION
著者Pletnev, S, Dauter, Z.
登録日2014-04-25
公開日2014-07-09
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Orange Fluorescent Proteins: Structural Studies of LSSmOrange, PSmOrange and PSmOrange2.
Plos One, 9, 2014
4Q7U
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Crystal structure of photoswitchable fluorescent protein PSmOrange2
分子名称: GLYCEROL, PSmOrange2
著者Malashkevich, V.N, Pletnev, S, Almo, S.C.
登録日2014-04-25
公開日2014-07-09
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Orange Fluorescent Proteins: Structural Studies of LSSmOrange, PSmOrange and PSmOrange2.
Plos One, 9, 2014
4Q7T
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Crystal structure of photoswitchable fluorescent protein PSmOrange
分子名称: PSmOrange
著者Malashkevich, V.N, Pletnev, S, Almo, S.C.
登録日2014-04-25
公開日2014-07-09
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Orange Fluorescent Proteins: Structural Studies of LSSmOrange, PSmOrange and PSmOrange2.
Plos One, 9, 2014

 

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