Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6F5V
DownloadVisualize
BU of 6f5v by Molmil
Crystal structure of the prephenate aminotransferase from Arabidopsis thaliana
分子名称: Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase, CITRIC ACID, PYRIDOXAL-5'-PHOSPHATE, ...
著者Cobessi, D, Robin, A, Giustini, C, Graindorge, M, Matringe, M.
登録日2017-12-03
公開日2019-03-13
最終更新日2025-04-09
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Tyrosine metabolism: identification of a key residue in the acquisition of prephenate aminotransferase activity by 1 beta aspartate aminotransferase.
Febs J., 286, 2019
6F1X
DownloadVisualize
BU of 6f1x by Molmil
Complex between MTH1 and compound 7 (a 7-azaindole-2-amide derivative)
分子名称: 4-(3-chlorophenyl)-~{N}-ethyl-1~{H}-pyrrolo[2,3-b]pyridine-2-carboxamide, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION
著者Viklund, J, Talagas, A, Tresaugues, L, Andersson, M, Ericsson, U, Forsblom, R, Ginman, T, Hallberg, K, Lindstrom, J, Persson, L, Silvander, C, Rahm, F.
登録日2017-11-23
公開日2018-03-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Creation of a Novel Class of Potent and Selective MutT Homologue 1 (MTH1) Inhibitors Using Fragment-Based Screening and Structure-Based Drug Design.
J. Med. Chem., 61, 2018
6F2M
DownloadVisualize
BU of 6f2m by Molmil
Structure of the bacteriophage T5 distal tail protein pb9 co-crystallized with 10mM Tb-Xo4
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Distal tail protein, ...
著者Engilberge, S, Riobe, F, Di Pietro, S, Breyton, C, Girard, E, Dumont, E, Maury, O.
登録日2017-11-24
公開日2018-10-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography.
Chemistry, 24, 2018
6ETB
DownloadVisualize
BU of 6etb by Molmil
Aerobic S262Y mutation of E. coli FLRD core
分子名称: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
著者Borges, P.T, Romao, C.V, Carrondo, M.A, Teixeira, M, Frazao, C.
登録日2017-10-26
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.905 Å)
主引用文献A tyrosine mutation in E. coli flavodiiron protein increases radiation sensitivity in the crystal structure
To Be Published
6F67
DownloadVisualize
BU of 6f67 by Molmil
Crystal structure of glutathione transferase Omega 3S from Trametes versicolor in complex with 3,4-Dihydroxybenzophenone
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, [3,4-bis(oxidanyl)phenyl]-phenyl-methanone, ...
著者Schwartz, M, Favier, F, Didierjean, C.
登録日2017-12-05
公開日2018-06-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Molecular recognition of wood polyphenols by phase II detoxification enzymes of the white rot Trametes versicolor.
Sci Rep, 8, 2018
6EVS
DownloadVisualize
BU of 6evs by Molmil
Characterization of 2-deoxyribosyltransferase from psychrotolerant bacterium Bacillus psychrosaccharolyticus: a suitable biocatalyst for the industrial synthesis of antiviral and antitumoral nucleosides
分子名称: N-deoxyribosyltransferase
著者Fresco-Tabohada, A, Fernandez-Lucas, J, Acebal, C, Arroyo, M, Ramon, F, Mancheno, J.M, de la Mata, I.
登録日2017-11-02
公開日2018-11-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献2'-Deoxyribosyltransferase from Bacillus psychrosaccharolyticus: A Mesophilic-Like Biocatalyst for the Synthesis of Modified Nucleosides from a Psychrotolerant Bacterium
Catalysts, 2019
6F93
DownloadVisualize
BU of 6f93 by Molmil
Helicobacter pylori serine hydroxymethyl transferase in apo form
分子名称: Serine hydroxymethyltransferase
著者Sodolescu, A, Dian, C, Terradot, L, Bouzhir-Sima, L, Lestini, R, Myllykallio, H, Skouloubris, S, Liebl, U.
登録日2017-12-13
公開日2018-12-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and functional insight into serine hydroxymethyltransferase from Helicobacter pylori.
PLoS ONE, 13, 2018
6EZM
DownloadVisualize
BU of 6ezm by Molmil
Imidazoleglycerol-phosphate dehydratase from Saccharomyces cerevisiae
分子名称: Imidazoleglycerol-phosphate dehydratase, MANGANESE (II) ION, [(2R)-2-hydroxy-3-(1H-1,2,4-triazol-1-yl)propyl]phosphonic acid
著者Rawson, S, Bisson, C, Hurdiss, D.L, Muench, S.P.
登録日2017-11-15
公開日2018-02-07
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Elucidating the structural basis for differing enzyme inhibitor potency by cryo-EM.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6F0X
DownloadVisualize
BU of 6f0x by Molmil
Cryo-EM structure of TRIP13 in complex with ATP gamma S, p31comet, C-Mad2 and Cdc20
分子名称: Cell division cycle protein 20 homolog, MAD2L1-binding protein, Mitotic spindle assembly checkpoint protein MAD2A, ...
著者Alfieri, C, Chang, L, Barford, D.
登録日2017-11-20
公開日2018-05-02
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Mechanism for remodelling of the cell cycle checkpoint protein MAD2 by the ATPase TRIP13.
Nature, 559, 2018
6F23
DownloadVisualize
BU of 6f23 by Molmil
Complex between MTH1 and compound 16 (a 4-amino-7-azaindole derivative)
分子名称: 4-[(2~{R})-2-phenylpyrrolidin-1-yl]-1~{H}-pyrrolo[2,3-b]pyridine, 7,8-dihydro-8-oxoguanine triphosphatase, GLYCEROL, ...
著者Viklund, J, Tresaugues, L, Talagas, A, Andersson, M, Ericsson, U, Forsblom, R, Ginman, T, Hallberg, K, Lindstrom, J, Persson, L, Silvander, C, Rahm, F.
登録日2017-11-23
公開日2018-03-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Creation of a Novel Class of Potent and Selective MutT Homologue 1 (MTH1) Inhibitors Using Fragment-Based Screening and Structure-Based Drug Design.
J. Med. Chem., 61, 2018
6FD2
DownloadVisualize
BU of 6fd2 by Molmil
Radical SAM 1,2-diol dehydratase AprD4 in complex with its substrate paromamine
分子名称: 5'-DEOXYADENOSINE, IRON/SULFUR CLUSTER, METHIONINE, ...
著者Liu, W.Q, Amara, P, Mouesca, J.M, Ji, X, Renoux, O, Martin, L, Zhang, C, Zhang, Q, Nicolet, Y.
登録日2017-12-21
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献1,2-Diol Dehydration by the Radical SAM Enzyme AprD4: A Matter of Proton Circulation and Substrate Flexibility.
J. Am. Chem. Soc., 140, 2018
6F35
DownloadVisualize
BU of 6f35 by Molmil
Crystal structure of the aspartate aminotranferase from Rhizobium meliloti
分子名称: ACETATE ION, Aspartate aminotransferase B, GLYCEROL, ...
著者Cobessi, D, Graindorge, M, Giustini, C, Matringe, M.
登録日2017-11-28
公開日2019-03-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Tyrosine metabolism: identification of a key residue in the acquisition of prephenate aminotransferase activity by 1 beta aspartate aminotransferase.
Febs J., 286, 2019
6F43
DownloadVisualize
BU of 6f43 by Molmil
Crystal structure of apo form of Glutathione transferase Omega 3S from Trametes versicolor
分子名称: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Schwartz, M, Favier, F, Didierjean, C.
登録日2017-11-29
公開日2018-06-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Molecular recognition of wood polyphenols by phase II detoxification enzymes of the white rot Trametes versicolor.
Sci Rep, 8, 2018
9FP5
DownloadVisualize
BU of 9fp5 by Molmil
Coxsackievirus A9 bound with CL213.
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Plavec, Z, Butcher, S.J, Mitchell, C, Buckner, C.
登録日2024-06-13
公開日2024-10-02
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献SAR Analysis of Novel Coxsackie virus A9 Capsid Binders.
J.Med.Chem., 67, 2024
6F55
DownloadVisualize
BU of 6f55 by Molmil
Complex structure of PACSIN SH3 domain and TRPV4 proline rich region
分子名称: PACSIN 3, PRR
著者Glogowski, N.A, Goretzki, B, Diehl, E, Duchardt-Ferner, E, Hacker, C, Hellmich, U.A.
登録日2017-11-30
公開日2018-10-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Basis of TRPV4 N Terminus Interaction with Syndapin/PACSIN1-3 and PIP2.
Structure, 26, 2018
7A5X
DownloadVisualize
BU of 7a5x by Molmil
Two copies of the catalytic domain of NanA sialidase from Streptococcus pneumoniae juxtaposed in the P212121 space group, in complex with DANA derivatized with a PEG linker on the glycerol group.
分子名称: (4~{S},5~{R},6~{R})-5-acetamido-6-[(1~{R},2~{S})-3-[[1-(2-ethoxyethyl)-1,2,3-triazol-4-yl]methylsulfanyl]-1,2-bis(oxidanyl)propyl]-4-oxidanyl-oxane-2-carboxylic acid, CALCIUM ION, CHLORIDE ION, ...
著者Bridot, C, Bouckaert, J.
登録日2020-08-24
公開日2020-11-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Polyvalent Transition-State Analogues of Sialyl Substrates Strongly Inhibit Bacterial Sialidases*.
Chemistry, 27, 2021
6EYP
DownloadVisualize
BU of 6eyp by Molmil
X-ray structure of the unliganded uridine phosphorylase from Vibrio cholerae at 1.22A
分子名称: GLYCEROL, MAGNESIUM ION, SODIUM ION, ...
著者Prokofev, I.I, Balaev, V.V, Gabdoulkhakov, A.G, Betzel, C, Lashkov, A.A.
登録日2017-11-13
公開日2018-11-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献X-ray structure of the unliganded uridine phosphorylase from Vibrio cholerae at 1.22A
To Be Published
6EXO
DownloadVisualize
BU of 6exo by Molmil
Crystal Structure of Rhodesain in complex with a Macrolactam Inhibitor
分子名称: (3~{S},14~{E})-19-chloranyl-~{N}-(1-cyanocyclopropyl)-5-oxidanylidene-12,17-dioxa-4-azatricyclo[16.2.2.0^{6,11}]docosa-1(21),6(11),7,9,14,18(22),19-heptaene-3-carboxamide, 1,2-ETHANEDIOL, Cysteine protease
著者Dietzel, U, Kisker, C.
登録日2017-11-08
公開日2018-04-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Repurposing a Library of Human Cathepsin L Ligands: Identification of Macrocyclic Lactams as Potent Rhodesain and Trypanosoma brucei Inhibitors.
J. Med. Chem., 61, 2018
6F1Y
DownloadVisualize
BU of 6f1y by Molmil
Dynein light intermediate chain region of the dynein tail/dynactin/BICDR1 complex
分子名称: Cytoplasmic dynein 1 heavy chain 1,Dynein heavy chain, Cytoplasmic dynein 1 light intermediate chain 2
著者Urnavicius, L, Lau, C.K, Elshenawy, M.M, Morales-Rios, E, Motz, C, Yildiz, A, Carter, A.P.
登録日2017-11-23
公開日2018-01-17
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM shows how dynactin recruits two dyneins for faster movement.
Nature, 554, 2018
6F2T
DownloadVisualize
BU of 6f2t by Molmil
Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Dohler, C, Zebisch, M, Strater, N.
登録日2017-11-27
公開日2018-08-01
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure and substrate binding mode of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3).
Sci Rep, 8, 2018
6F64
DownloadVisualize
BU of 6f64 by Molmil
Crystal structure of the SYCP1 C-terminal back-to-back assembly
分子名称: ACETATE ION, Synaptonemal complex protein 1
著者Dunce, J.M, Millan, C, Uson, I, Davies, O.R.
登録日2017-12-04
公開日2018-06-06
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.493 Å)
主引用文献Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly.
Nat. Struct. Mol. Biol., 25, 2018
6F4K
DownloadVisualize
BU of 6f4k by Molmil
Crystal structure of glutathione transferase Omega 3S from Trametes versicolor in complex with hexyl-glutathione
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Schwartz, M, Favier, F, Didierjean, C.
登録日2017-11-29
公開日2018-06-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Molecular recognition of wood polyphenols by phase II detoxification enzymes of the white rot Trametes versicolor.
Sci Rep, 8, 2018
6F51
DownloadVisualize
BU of 6f51 by Molmil
Crystal structure of glutathione transferase Omega 3S from Trametes versicolor in complex with glutathionyl-phenylacetophenone
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, L-gamma-glutamyl-S-(2-biphenyl-4-yl-2-oxoethyl)-L-cysteinylglycine, ...
著者Schwartz, M, Favier, F, Didierjean, C.
登録日2017-11-30
公開日2018-06-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Molecular recognition of wood polyphenols by phase II detoxification enzymes of the white rot Trametes versicolor.
Sci Rep, 8, 2018
6FAD
DownloadVisualize
BU of 6fad by Molmil
SR protein kinase 1 (SRPK1) in complex with the RGG-box of HSV1 ICP27
分子名称: PHOSPHATE ION, SRSF protein kinase 1, mRNA export factor
著者Tunnicliffe, R.B, Levy, C, Mould, A.P, Mckenzie, E.A, Sandri-Goldin, R.M, Golovanov, A.P.
登録日2017-12-15
公開日2019-09-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Molecular Mechanism of SR Protein Kinase 1 Inhibition by the Herpes Virus Protein ICP27.
Mbio, 10, 2019
6F77
DownloadVisualize
BU of 6f77 by Molmil
Crystal structure of the prephenate aminotransferase from Rhizobium meliloti
分子名称: Aspartate aminotransferase A, PYRIDOXAL-5'-PHOSPHATE
著者Cobessi, D, Giustini, C, Graindorge, M, Matringe, M.
登録日2017-12-07
公開日2019-03-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.794 Å)
主引用文献Tyrosine metabolism: identification of a key residue in the acquisition of prephenate aminotransferase activity by 1 beta aspartate aminotransferase.
Febs J., 286, 2019

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon