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3WR2
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BU of 3wr2 by Molmil
RNase Po1 complexed with 3'GMP
分子名称: GUANOSINE-3'-MONOPHOSPHATE, Guanyl-specific ribonuclease Po1
著者Hara, Y, Katsutani, T, Kobayashi, H, Suzuki, M.
登録日2014-02-13
公開日2015-02-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献RNase Po1 complexed with 3'GMP
to be published
3WXT
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BU of 3wxt by Molmil
Crystal structure of hen egg-white lysozyme
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Sugahara, M, Nango, E, Suzuki, M.
登録日2014-08-08
公開日2014-11-05
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
3WXU
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BU of 3wxu by Molmil
Crystal structure of hen egg-white lysozyme
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Sugahara, M, Nango, E, Suzuki, M.
登録日2014-08-08
公開日2014-11-05
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
2Z5Q
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Apo-Fr with intermediate content of Pd ion
分子名称: CADMIUM ION, Ferritin light chain, GLYCEROL, ...
著者Ueno, T, Hirata, K, Abe, M, Suzuki, M, Abe, S, Shimizu, N, Yamamoto, M, Takata, M, Watanabe, Y.
登録日2007-07-16
公開日2008-07-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Process of accumulation of metal ions on the interior surface of apo-ferritin: crystal structures of a series of apo-ferritins containing variable quantities of Pd(II) ions.
J.Am.Chem.Soc., 131, 2009
2Z5R
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BU of 2z5r by Molmil
Apo-Fr with high content of Pd ions
分子名称: CADMIUM ION, Ferritin light chain, PALLADIUM ION
著者Ueno, T, Hirata, K, Abe, M, Suzuki, M, Abe, S, Shimizu, N, Yamamoto, M, Takata, M, Watanabe, Y.
登録日2007-07-16
公開日2008-07-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Process of accumulation of metal ions on the interior surface of apo-ferritin: crystal structures of a series of apo-ferritins containing variable quantities of Pd(II) ions.
J.Am.Chem.Soc., 131, 2009
2Z4P
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BU of 2z4p by Molmil
Crystal structure of FFRP-DM1
分子名称: 75aa long hypothetical regulatory protein AsnC, ISOLEUCINE
著者Yamada, M, Koike, H, Kudo, N, Suzuki, M.
登録日2007-06-21
公開日2007-09-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A Structural Code for Discriminating between Transcription Signals Revealed by the Feast/Famine Regulatory Protein DM1 in Complex with Ligands
Structure, 15, 2007
3ASX
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BU of 3asx by Molmil
Human Squalene synthase in complex with 1-{4-[{4-chloro-2-[(2-chlorophenyl)(hydroxy)methyl]phenyl}(2,2-dimethylpropyl)amino]-4-oxobutanoyl}piperidine-3-carboxylic acid
分子名称: (3R)-1-{4-[{4-chloro-2-[(S)-(2-chlorophenyl)(hydroxy)methyl]phenyl}(2,2-dimethylpropyl)amino]-4-oxobutanoyl}piperidine-3-carboxylic acid, PHOSPHATE ION, Squalene synthase
著者Shimizu, H, Suzuki, M, Katakura, S, Yamazaki, K, Higashihashi, N, Ichikawa, M, Yokomizo, A, Itoh, M, Sugita, K, Usui, H.
登録日2010-12-22
公開日2011-12-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of a new 2-aminobenzhydrol template for highly potent squalene synthase inhibitors
Bioorg.Med.Chem., 19, 2011
3VQG
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BU of 3vqg by Molmil
Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein
分子名称: C-terminal peptide from Immunoglobulin superfamily member 5, E3 ubiquitin-protein ligase LNX, SULFATE ION
著者Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H.
登録日2012-03-23
公開日2013-03-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase
To be Published
2ZNY
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BU of 2zny by Molmil
Crystal structure of the FFRP
分子名称: ARGININE, Uncharacterized HTH-type transcriptional regulator PH1519
著者Yamada, M, Suzuki, M.
登録日2008-05-02
公開日2009-03-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Interactions between the archaeal transcription repressor FL11 and its coregulators lysine and arginine.
Proteins, 74, 2009
3WUN
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BU of 3wun by Molmil
Crystal structure of hen egg-white lysozyme
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Sugahara, M, Nango, E, Suzuki, M.
登録日2014-04-28
公開日2015-05-27
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of hen egg-white lysozyme
To be Published
3AWE
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BU of 3awe by Molmil
Crystal structure of Pten-like domain of Ci-VSP (248-576)
分子名称: ACETIC ACID, SODIUM ION, SULFATE ION, ...
著者Matsuda, M, Sakata, S, Takeshita, K, Suzuki, M, Yamashita, E, Okamura, Y, Nakagawa, A.
登録日2011-03-19
公開日2011-05-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Crystal structure of the cytoplasmic phosphatase and tensin homolog (PTEN)-like region of Ciona intestinalis voltage-sensing phosphatase provides insight into substrate specificity and redox regulation of the phosphoinositide phosphatase activity
J.Biol.Chem., 286, 2011
2ZNZ
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BU of 2znz by Molmil
Crystal structure of FFRP
分子名称: LYSINE, Uncharacterized HTH-type transcriptional regulator PH1519
著者Yamada, M, Suzuki, M.
登録日2008-05-02
公開日2009-03-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Interactions between the archaeal transcription repressor FL11 and its coregulators lysine and arginine.
Proteins, 74, 2009
3AWF
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BU of 3awf by Molmil
Crystal structure of Pten-like domain of Ci-VSP (236-576)
分子名称: GLYCEROL, SULFATE ION, Voltage-sensor containing phosphatase
著者Matsuda, M, Sakata, S, Takeshita, K, Suzuki, M, Yamashita, E, Okamura, Y, Nakagawa, A.
登録日2011-03-19
公開日2011-05-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal structure of the cytoplasmic phosphatase and tensin homolog (PTEN)-like region of Ciona intestinalis voltage-sensing phosphatase provides insight into substrate specificity and redox regulation of the phosphoinositide phosphatase activity
J.Biol.Chem., 286, 2011
3AWG
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BU of 3awg by Molmil
Crystal structure of Pten-like domain of Ci-VSP G356A mutant (248-576)
分子名称: SULFATE ION, Voltage-sensor containing phosphatase
著者Matsuda, M, Sakata, S, Takeshita, K, Suzuki, M, Yamashita, E, Okamura, Y, Nakagawa, A.
登録日2011-03-19
公開日2011-05-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Crystal structure of the cytoplasmic phosphatase and tensin homolog (PTEN)-like region of Ciona intestinalis voltage-sensing phosphatase provides insight into substrate specificity and redox regulation of the phosphoinositide phosphatase activity
J.Biol.Chem., 286, 2011
3VRR
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BU of 3vrr by Molmil
Crystal structure of the tyrosine kinase binding domain of Cbl-c (PL mutant) in complex with phospho-EGFR peptide
分子名称: CALCIUM ION, Epidermal growth factor receptor, Signal transduction protein CBL-C
著者Takeshita, K, Tezuka, T, Isozaki, Y, Yamashita, E, Suzuki, M, Yamanashi, Y, Yamamoto, T, Nakagawa, A.
登録日2012-04-13
公開日2013-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural flexibility regulates phosphopeptide-binding activity of the tyrosine kinase binding domain of Cbl-c.
J.Biochem., 152, 2012
3VRO
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BU of 3vro by Molmil
Crystal structure of the tyrosine kinase binding domain of Cbl-c in complex with phospho-Src peptide
分子名称: CALCIUM ION, Proto-oncogene tyrosine-protein kinase Src, Signal transduction protein CBL-C
著者Takeshita, K, Tezuka, T, Isozaki, Y, Yamashita, E, Suzuki, M, Yamanashi, Y, Yamamoto, T, Nakagawa, A.
登録日2012-04-13
公開日2013-03-06
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural flexibility regulates phosphopeptide-binding activity of the tyrosine kinase binding domain of Cbl-c.
J.Biochem., 152, 2012
3VRQ
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BU of 3vrq by Molmil
Crystal structure of the tyrosine kinase binding domain of Cbl-c (PL mutant)
分子名称: CALCIUM ION, Signal transduction protein CBL-C
著者Takeshita, K, Tezuka, T, Isozaki, Y, Yamashita, E, Suzuki, M, Yamanashi, Y, Yamamoto, T, Nakagawa, A.
登録日2012-04-13
公開日2013-03-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structural flexibility regulates phosphopeptide-binding activity of the tyrosine kinase binding domain of Cbl-c.
J.Biochem., 152, 2012
2ZUQ
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BU of 2zuq by Molmil
Crystal structure of DsbB-Fab complex
分子名称: Disulfide bond formation protein B, Fab fragment heavy chain, Fab fragment light chain, ...
著者Inaba, K, Suzuki, M, Murakami, S.
登録日2008-10-28
公開日2009-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Dynamic nature of disulphide bond formation catalysts revealed by crystal structures of DsbB
Embo J., 28, 2009
3APQ
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BU of 3apq by Molmil
Crystal structure of J-Trx1 fragment of ERdj5
分子名称: DnaJ homolog subfamily C member 10
著者Inaba, K, Suzuki, M, Nagata, K.
登録日2010-10-20
公開日2011-04-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural basis of an ERAD pathway mediated by the ER-resident protein disulfide reductase ERdj5.
Mol.Cell, 41, 2011
3APO
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BU of 3apo by Molmil
Crystal structure of full-length ERdj5
分子名称: DnaJ homolog subfamily C member 10
著者Inaba, K, Suzuki, M, Nagata, K.
登録日2010-10-20
公開日2011-04-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of an ERAD pathway mediated by the ER-resident protein disulfide reductase ERdj5.
Mol.Cell, 41, 2011
3APS
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BU of 3aps by Molmil
Crystal structure of Trx4 domain of ERdj5
分子名称: DnaJ homolog subfamily C member 10, GLYCEROL, SULFATE ION
著者Inaba, K, Suzuki, M, Nagata, K.
登録日2010-10-20
公開日2011-04-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of an ERAD pathway mediated by the ER-resident protein disulfide reductase ERdj5.
Mol.Cell, 41, 2011
2ZIB
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BU of 2zib by Molmil
Crystal structure analysis of calcium-independent type II antifreeze protein
分子名称: SULFATE ION, Type II antifreeze protein
著者Nishimiya, Y, Sato, R, Kondo, H, Noro, N, Sugimoto, H, Suzuki, M, Tsuda, S.
登録日2008-02-14
公開日2008-08-19
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Crystal structure and mutational analysis of Ca2+-independent type II antifreeze protein from longsnout poacher, Brachyopsis rostratus
J.Mol.Biol., 382, 2008
2ZUP
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BU of 2zup by Molmil
Updated crystal structure of DsbB-DsbA complex from E. coli
分子名称: Disulfide bond formation protein B, Thiol:disulfide interchange protein dsbA, UBIQUINONE-1, ...
著者Inaba, K, Suzuki, M, Murakami, S, Nakagawa, A.
登録日2008-10-28
公開日2009-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Dynamic nature of disulphide bond formation catalysts revealed by crystal structures of DsbB
Embo J., 28, 2009
3AXA
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BU of 3axa by Molmil
Crystal structure of afadin PDZ domain in complex with the C-terminal peptide from nectin-3
分子名称: Afadin, Nectin-3
著者Fujiwara, Y, Goda, N, Narita, H, Satomura, K, Nakagawa, A, Sakisaka, T, Suzuki, M, Hiroaki, H.
登録日2011-03-31
公開日2012-04-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Crystal structure of afadin PDZ domain-nectin-3 complex shows the structural plasticity of the ligand-binding site.
Protein Sci., 24, 2015
3VJJ
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Crystal Structure Analysis of the P9-1
分子名称: P9-1
著者Akita, F, Higashiura, A, Suzuki, M, Tsukihara, T, Nakagawa, A, Omura, T.
登録日2011-10-24
公開日2011-12-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystallographic analysis reveals octamerization of viroplasm matrix protein P9-1 of Rice black streaked dwarf virus
J.Virol., 86, 2012

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