Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3Q7Y
DownloadVisualize
BU of 3q7y by Molmil
Crystal structure of K15R/E18D/Y22W/H41G/F44W/E51D/E53P/K57R/E60D/Y64W/H82G/F85W/E90D/E94P/K98R/E101D/Y108W/H129G/F132W/E137D Symfoil-4P: de novo designed beta-trefoil architecture with symmetric primary structure
分子名称: De novo designed beta-trefoil architecture with symmetric primary structure
著者Blaber, M, Lee, J.
登録日2011-01-05
公開日2012-01-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein.
Proc.Natl.Acad.Sci.USA, 110, 2013
3Q7X
DownloadVisualize
BU of 3q7x by Molmil
Crystal structure of Symfoil-4P/PV1: de novo designed beta-trefoil architecture with symmetric primary structure, primitive version 1
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, de novo designed beta-trefoil architecture with symmetric primary structure
著者Blaber, M, Lee, J.
登録日2011-01-05
公開日2012-01-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein.
Proc.Natl.Acad.Sci.USA, 110, 2013
3RV5
DownloadVisualize
BU of 3rv5 by Molmil
Crystal structure of human cardiac troponin C regulatory domain in complex with cadmium and deoxycholic acid
分子名称: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, CADMIUM ION, CALCIUM ION, ...
著者Li, A.Y, Lee, J, Borek, D, Otwinowski, Z, Tibbits, G, Paetzel, M.
登録日2011-05-06
公開日2011-08-31
最終更新日2011-11-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of cardiac troponin C regulatory domain in complex with cadmium and deoxycholic Acid reveals novel conformation.
J.Mol.Biol., 413, 2011
3SNV
DownloadVisualize
BU of 3snv by Molmil
Crystal structure of Symfoil-4T Permutation #1: de novo designed beta-trefoil architecture with symmetric primary structure
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, Symfoil-4T/Permutation #1 synthetic protein
著者Blaber, M, Longo, L, Lee, J.
登録日2011-06-29
公開日2012-07-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Folding pathway redundancy in symmetric protein architecture
To be Published
7UPH
DownloadVisualize
BU of 7uph by Molmil
Structure of a ribosome with tethered subunits
分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Kim, D.S, Watkins, A, Bidstrup, E, Lee, J, Topkar, V.V, Kofman, C, Schwarz, K.J, Liu, Y, Pintilie, G, Roney, E, Das, R, Jewett, M.C.
登録日2022-04-15
公開日2022-08-17
最終更新日2022-08-31
実験手法ELECTRON MICROSCOPY (4.18 Å)
主引用文献Three-dimensional structure-guided evolution of a ribosome with tethered subunits.
Nat.Chem.Biol., 18, 2022
2GEF
DownloadVisualize
BU of 2gef by Molmil
Crystal structure of a Novel viral protease with a serine/lysine catalytic dyad mechanism
分子名称: Protease VP4
著者Paetzel, M, Feldman, A.R, Lee, J, Delmas, B.
登録日2006-03-20
公開日2006-05-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a novel viral protease with a serine/lysine catalytic dyad mechanism
J.Mol.Biol., 358, 2006
2HB1
DownloadVisualize
BU of 2hb1 by Molmil
Crystal Structure of PTP1B with Monocyclic Thiophene Inhibitor
分子名称: 4-BROMO-3-(CARBOXYMETHOXY)THIOPHENE-2-CARBOXYLIC ACID, Tyrosine-protein phosphatase non-receptor type 1
著者Xu, W, Wan, Z.-K, Lee, J.
登録日2006-06-13
公開日2006-08-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Monocyclic thiophenes as protein tyrosine phosphatase 1B inhibitors: Capturing interactions with Asp48.
Bioorg.Med.Chem.Lett., 16, 2006
2HQ8
DownloadVisualize
BU of 2hq8 by Molmil
Crystal structure of coelenterazine-binding protein from renilla muelleri in the ca loaded apo form
分子名称: CALCIUM ION, Coelenterazine-binding protein ca-bound apo form
著者Stepanyuk, G, Liu, Z.J, Vysotski, E.S, Lee, J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2006-07-18
公開日2006-09-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of coelenterazine-binding protein from Renilla muelleri at 1.7 A: why it is not a calcium-regulated photoprotein.
PHOTOCHEM.PHOTOBIOL.SCI., 7, 2008
2HPS
DownloadVisualize
BU of 2hps by Molmil
Crystal structure of coelenterazine-binding protein from Renilla Muelleri
分子名称: C2-HYDROXY-COELENTERAZINE, GLYCEROL, coelenterazine-binding protein with bound coelenterazine
著者Stepanyuk, G, Liu, Z.J, Vysotski, E.S, Lee, J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2006-07-17
公開日2007-01-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Crystal structure of coelenterazine-binding protein from Renilla muelleri at 1.7 A: why it is not a calcium-regulated photoprotein.
PHOTOCHEM.PHOTOBIOL.SCI., 7, 2008
2HW9
DownloadVisualize
BU of 2hw9 by Molmil
Crystal structure of Lys12Cys/Cys117Val mutant of human acidic fibroblast Growth factor at 1.60 angstrom resolution.
分子名称: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
著者Dubey, V.K, Lee, J, Somasundaram, T, Blaber, M.
登録日2006-08-01
公開日2007-06-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Spackling the crack: stabilizing human fibroblast growth factor-1 by targeting the N and C terminus beta-strand interactions.
J.Mol.Biol., 371, 2007
2HWM
DownloadVisualize
BU of 2hwm by Molmil
Crystal structure of Lys12Val/Cys117Val mutant of human acidic fibroblast growth factor at 1.60 angstrom resolution
分子名称: FORMIC ACID, Heparin-binding growth factor 1
著者Dubey, V.K, Lee, J, Somasundaram, T, Blaber, M.
登録日2006-08-01
公開日2007-06-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Spackling the crack: stabilizing human fibroblast growth factor-1 by targeting the N and C terminus beta-strand interactions.
J.Mol.Biol., 371, 2007
2HWA
DownloadVisualize
BU of 2hwa by Molmil
Crystal structure of Lys12Thr/Cys117Val mutant of human acidic fibroblast growth factor at 1.65 angstrom resolution.
分子名称: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
著者Dubey, V.K, Lee, J, Somasundaram, T, Blaber, M.
登録日2006-08-01
公開日2007-06-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Spackling the crack: stabilizing human fibroblast growth factor-1 by targeting the N and C terminus beta-strand interactions.
J.Mol.Biol., 371, 2007
2HZ9
DownloadVisualize
BU of 2hz9 by Molmil
Crystal structure of Lys12Val/Asn95Val/Cys117Val mutant of human acidic fibroblast growth factor at 1.70 angstrom resolution.
分子名称: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
著者Dubey, V.K, Lee, J, Somasundaram, T, Blaber, M.
登録日2006-08-08
公開日2007-06-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Spackling the Crack: Stabilizing Human Fibroblast Growth Factor-1 by Targeting the N and C terminus beta-Strand Interactions
J.Mol.Biol., 371, 2007
7DTG
DownloadVisualize
BU of 7dtg by Molmil
Crystal structure of lamin B1 Ig-like domain from human
分子名称: Lamin-B1
著者Ahn, J, Lee, J, Ha, N.-C.
登録日2021-01-05
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Beta-strand-mediated dimeric formation of the Ig-like domains of human lamin A/C and B1.
Biochem.Biophys.Res.Commun., 550, 2021
4UIP
DownloadVisualize
BU of 4uip by Molmil
The complex structure of extracellular domain of EGFR with Repebody (rAC1).
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, EPIDERMAL GROWTH FACTOR RECEPTOR, ...
著者Kang, Y.J, Cha, Y.J, Cho, H.S, Lee, J.J, Kim, H.S.
登録日2015-03-31
公開日2015-11-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Enzymatic Prenylation and Oxime Ligation for the Synthesis of Stable and Homogeneous Protein-Drug Conjugates for Targeted Therapy.
Angew.Chem.Int.Ed.Engl., 54, 2015
6P79
DownloadVisualize
BU of 6p79 by Molmil
Engineered single chain antibody C9+C14 ScFv
分子名称: Engineered antibody heavy chain, Engineered antibody light chain
著者Zhang, Y, Li, W, Marshall, N.
登録日2019-06-05
公開日2020-04-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.583 Å)
主引用文献Computer-based Engineering of Thermostabilized Antibody Fragments.
Aiche J, 66, 2020
8U0T
DownloadVisualize
BU of 8u0t by Molmil
PRD-0038 RBD bound to Rhinolophus alcyone ACE2 (local refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, PRD-0038, ...
著者Park, Y.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2023-08-29
公開日2023-12-06
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Broad receptor tropism and immunogenicity of a clade 3 sarbecovirus.
Cell Host Microbe, 31, 2023
8K05
DownloadVisualize
BU of 8k05 by Molmil
Pseudouridine 5'-monophosphate glycosylase from Arabidopsis thaliana -- sulfate bound holoenzyme
分子名称: MANGANESE (II) ION, Pseudouridine-5'-phosphate glycosidase, SULFATE ION
著者Lee, J.Y, Kim, S.H, Rhee, S.K.
登録日2023-07-07
公開日2024-05-15
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure and function of the pseudouridine 5'-monophosphate glycosylase PUMY from Arabidopsis thaliana.
Rna Biol., 21, 2024
8K06
DownloadVisualize
BU of 8k06 by Molmil
Pseudouridine 5'-monophosphate glycosylase from Arabidopsis thaliana -- PSU, R5P bound K185A mutant
分子名称: 5-O-phosphono-beta-D-ribofuranose, MANGANESE (II) ION, PSEUDOURIDINE-5'-MONOPHOSPHATE, ...
著者Lee, J.Y, Kim, S.H, Rhee, S.K.
登録日2023-07-07
公開日2024-05-15
実験手法X-RAY DIFFRACTION (1.845 Å)
主引用文献Structure and function of the pseudouridine 5'-monophosphate glycosylase PUMY from Arabidopsis thaliana.
Rna Biol., 21, 2024
8K07
DownloadVisualize
BU of 8k07 by Molmil
Pseudouridine 5'-monophosphate glycosylase from Arabidopsis thaliana -- citrate bound K185A mutant
分子名称: CITRIC ACID, MANGANESE (II) ION, Pseudouridine-5'-phosphate glycosidase
著者Lee, J.Y, Kim, S.H, Rhee, S.K.
登録日2023-07-07
公開日2024-05-15
実験手法X-RAY DIFFRACTION (1.121 Å)
主引用文献Structure and function of the pseudouridine 5'-monophosphate glycosylase PUMY from Arabidopsis thaliana.
Rna Biol., 21, 2024
4J4L
DownloadVisualize
BU of 4j4l by Molmil
Modular evolution and design of the protein binding interface
分子名称: Interleukin-6, Internalin B,REPEAT MODULES,Variable lymphocyte receptor B
著者Cheong, H.K, Kim, H.J.
登録日2013-02-07
公開日2014-02-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Modular evolution and design of the protein binding interface
To be Published
6AMN
DownloadVisualize
BU of 6amn by Molmil
Crystal Structure of Hsp104 N Domain
分子名称: Heat shock protein 104
著者Lee, S.
登録日2017-08-10
公開日2017-11-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.816 Å)
主引用文献Overlapping and Specific Functions of the Hsp104 N Domain Define Its Role in Protein Disaggregation.
Sci Rep, 7, 2017
5WBW
DownloadVisualize
BU of 5wbw by Molmil
Yeast Hsp104 fragment 1-360
分子名称: Heat shock protein 104
著者Lee, S.
登録日2017-06-29
公開日2018-01-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural determinants for protein unfolding and translocation by the Hsp104 protein disaggregase.
Biosci. Rep., 37, 2017
3IX9
DownloadVisualize
BU of 3ix9 by Molmil
Crystal structure of Streptococcus pneumoniae dihydrofolate reductase - Sp9 mutant
分子名称: Dihydrofolate reductase, METHOTREXATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Yennawar, N.H.
登録日2009-09-03
公開日2010-02-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Kinetic and structural characterization of dihydrofolate reductase from Streptococcus pneumoniae
Biochemistry, 49, 2010
7YLK
DownloadVisualize
BU of 7ylk by Molmil
Myoglobin containing Ir complex
分子名称: Myoglobin, SULFATE ION, delta-{1-([2,2'-bipyridin]-5-ylmethyl)pyrrolidine-2,5-dione}bis[2-(2,4-difluorophenyl)pyridine)]iridium(III), ...
著者Lee, J.H, Song, W.J.
登録日2022-07-26
公開日2023-03-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Photocatalytic C-O Coupling Enzymes That Operate via Intramolecular Electron Transfer.
J.Am.Chem.Soc., 145, 2023

220472

件を2024-05-29に公開中

PDB statisticsPDBj update infoContact PDBjnumon