Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2EVL
DownloadVisualize
BU of 2evl by Molmil
Crystal structure of human Glycolipid Transfer Protein complexed with 18:2 Galactosylceramide
分子名称: Glycolipid transfer protein, LINOLEIC ACID, N-OCTANE, ...
著者Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
登録日2005-10-31
公開日2006-11-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EUM
DownloadVisualize
BU of 2eum by Molmil
Crystal structure of human Glycolipid Transfer Protein complexed with 8:0 Lactosylceramide
分子名称: DECANE, Glycolipid transfer protein, N-OCTANE, ...
著者Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
登録日2005-10-28
公開日2006-11-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2F6N
DownloadVisualize
BU of 2f6n by Molmil
Crystal structure of PHD finger-linker-bromodomain fragment of human BPTF in the free form
分子名称: ZINC ION, bromodomain PHD finger transcription factor
著者Li, H, Patel, D.J.
登録日2005-11-29
公開日2006-07-11
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2F8S
DownloadVisualize
BU of 2f8s by Molmil
Crystal structure of Aa-Ago with externally-bound siRNA
分子名称: 5'-R(P*AP*GP*AP*CP*AP*GP*CP*AP*UP*AP*UP*AP*UP*GP*CP*UP*GP*UP*CP*UP*UP*U)-3', Argonaute protein
著者Yuan, Y.R, Chen, H.Y, Patel, D.J.
登録日2005-12-03
公開日2006-10-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A Potential Protein-RNA Recognition Event along the RISC-Loading Pathway from the Structure of A. aeolicus Argonaute with Externally Bound siRNA.
Structure, 14, 2006
2EVS
DownloadVisualize
BU of 2evs by Molmil
Crystal structure of human Glycolipid Transfer Protein complexed with n-hexyl-beta-D-glucoside
分子名称: DECANE, Glycolipid transfer protein, HEXANE, ...
著者Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
登録日2005-10-31
公開日2006-11-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EUK
DownloadVisualize
BU of 2euk by Molmil
Crystal Structure of Human Glycolipid Transfer Protein complexed with 24:1 Galactosylceramide
分子名称: (15E)-TETRACOS-15-ENOIC ACID, Glycolipid transfer protein, N-OCTANE, ...
著者Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
登録日2005-10-28
公開日2006-11-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EVT
DownloadVisualize
BU of 2evt by Molmil
Crystal structure of D48V mutant of human Glycolipid Transfer Protein
分子名称: Glycolipid transfer protein, HEXANE
著者Malinina, L, Malakhova, M.L, Teplov, A, Brown, R.E, Patel, D.J.
登録日2005-10-31
公開日2005-11-15
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2F8T
DownloadVisualize
BU of 2f8t by Molmil
Crystal structure of Aa-Ago with externally-bound siRNA
分子名称: 26-MER, Argonaute protein
著者Yuan, Y.R, Chen, H.Y, Patel, D.J.
登録日2005-12-03
公開日2006-10-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献A Potential Protein-RNA Recognition Event along the RISC-Loading Pathway from the Structure of A. aeolicus Argonaute with Externally Bound siRNA.
Structure, 14, 2006
2F6J
DownloadVisualize
BU of 2f6j by Molmil
Crystal structure of PHD finger-linker-bromodomain fragment of human BPTF in the H3(1-15)K4me3 bound state
分子名称: ZINC ION, bromodomain PHD finger transcription factor, histone H3, ...
著者Li, H, Patel, D.J.
登録日2005-11-29
公開日2006-07-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
136D
DownloadVisualize
BU of 136d by Molmil
SOLUTION STRUCTURE OF A PURINE(DOT)PURINE(DOT)PYRIMIDINE DNA TRIPLEX CONTAINING G(DOT)GC AND T(DOT)AT TRIPLES
分子名称: DNA TRIPLEX
著者Radhakrishnan, I, Patel, D.J.
登録日1993-08-30
公開日1994-04-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a purine.purine.pyrimidine DNA triplex containing G.GC and T.AT triples.
Structure, 1, 1993
135D
DownloadVisualize
BU of 135d by Molmil
SOLUTION STRUCTURE OF A PURINE(DOT)PURINE(DOT)PYRIMIDINE DNA TRIPLEX CONTAINING G(DOT)GC AND T(DOT)AT TRIPLES
分子名称: DNA TRIPLEX
著者Radhakrishnan, I, Patel, D.J.
登録日1993-08-30
公開日1994-04-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a purine.purine.pyrimidine DNA triplex containing G.GC and T.AT triples.
Structure, 1, 1993
1OZ2
DownloadVisualize
BU of 1oz2 by Molmil
CRYSTAL STRUCTURE OF 3-MBT REPEATS OF LETHAL (3) MALIGNANT BRAIN TUMOR (NATIVE-II) AT 1.55 ANGSTROM
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lethal(3)malignant brain tumor-like protein, SULFATE ION
著者Wang, W.K, Tereshko, V, Boccuni, P, MacGrogan, D, Nimer, S.D, Patel, D.J.
登録日2003-04-07
公開日2003-08-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Malignant brain tumor repeats: a three-leaved propeller architecture with ligand/peptide binding pockets.
Structure, 11, 2003
1OYX
DownloadVisualize
BU of 1oyx by Molmil
CRYSTAL STRUCTURE OF 3-MBT REPEATS OF LETHAL (3) MALIGNANT BRAIN TUMOR (SELENO-MET) AT 1.85 ANGSTROM
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lethal(3)malignant brain tumor-like protein, SULFATE ION
著者Wang, W.K, Tereshko, V, Boccuni, P, MacGrogan, D, Nimer, S.D, Patel, D.J.
登録日2003-04-07
公開日2003-08-19
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Malignant brain tumor repeats: a three-leaved propeller architecture with ligand/peptide binding pockets.
Structure, 11, 2003
6MUR
DownloadVisualize
BU of 6mur by Molmil
Cryo-EM structure of Csm-crRNA-target RNA ternary complex in type III-A CRISPR-Cas system
分子名称: RNA (27-MER), RNA (5'-R(P*GP*CP*AP*AP*AP*CP*CP*GP*CP*CP*UP*CP*UP*GP*CP*CP*CP*GP*C)-3'), Uncharacterized protein, ...
著者Jia, N, Wang, C, Eng, E.T, Patel, D.J.
登録日2018-10-23
公開日2018-12-12
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity.
Mol. Cell, 73, 2019
6MJW
DownloadVisualize
BU of 6mjw by Molmil
human cGAS catalytic domain bound with the inhibitor G150
分子名称: 1-[9-(6-aminopyridin-3-yl)-6,7-dichloro-1,3,4,5-tetrahydro-2H-pyrido[4,3-b]indol-2-yl]-2-hydroxyethan-1-one, Cyclic GMP-AMP synthase, ZINC ION
著者Lama, L, Adura, C, Xie, W, Tomita, D, Kamei, T, Kuryavyi, V, Gogakos, T, Steinberg, J.I, Miller, M, Ramos-Espiritu, L, Asano, Y, Hashizume, S, Aida, J, Imaeda, T, Okamoto, R, Jennings, A.J, Michinom, M, Kuroita, T, Stamford, A, Gao, P, Meinke, P, Glickman, J.F, Patel, D.J, Tuschl, T.
登録日2018-09-23
公開日2019-05-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.405 Å)
主引用文献Development of human cGAS-specific small-molecule inhibitors for repression of dsDNA-triggered interferon expression.
Nat Commun, 10, 2019
6MUT
DownloadVisualize
BU of 6mut by Molmil
Cryo-EM structure of ternary Csm-crRNA-target RNA with anti-tag sequence complex in type III-A CRISPR-Cas system
分子名称: RNA (5'-R(*GP*UP*GP*GP*AP*AP*AP*GP*GP*CP*GP*GP*GP*CP*AP*GP*AP*GP*GP*C)-3'), RNA (5'-R(P*CP*CP*UP*CP*UP*GP*CP*CP*CP*GP*CP*CP*UP*UP*UP*CP*CP*AP*C)-3'), Uncharacterized protein Csm1, ...
著者Jia, N, Wang, C, Eng, E.T, Patel, D.J.
登録日2018-10-23
公開日2018-12-12
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity.
Mol. Cell, 73, 2019
6MRK
DownloadVisualize
BU of 6mrk by Molmil
Crystal structure of dmNxf2 NTF2-like domain in complex with Nxt1/p15
分子名称: NTF2-related export protein, Nuclear RNA export factor 2
著者Wang, J, Patel, D.J.
登録日2018-10-13
公開日2019-07-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The nascent RNA binding complex SFiNX licenses piRNA-guided heterochromatin formation.
Nat.Struct.Mol.Biol., 26, 2019
6MUU
DownloadVisualize
BU of 6muu by Molmil
Cryo-EM structure of Csm-crRNA binary complex in type III-A CRISPR-Cas system
分子名称: RNA (25-MER), Uncharacterized protein Csm1, Uncharacterized protein Csm2, ...
著者Jia, N, Wang, C, Eng, E.T, Patel, D.J.
登録日2018-10-23
公開日2018-12-19
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity.
Mol. Cell, 73, 2019
6MJU
DownloadVisualize
BU of 6mju by Molmil
human cGAS catalytic domain bound with the inhibitor G108
分子名称: 1-[6,7-dichloro-9-(1H-pyrazol-4-yl)-1,3,4,5-tetrahydro-2H-pyrido[4,3-b]indol-2-yl]-2-hydroxyethan-1-one, Cyclic GMP-AMP synthase, ZINC ION
著者Lama, L, Adura, C, Xie, W, Tomita, D, Kamei, T, Kuryavyi, V, Gogakos, T, Steinberg, J.I, Miller, M, Ramos-Espiritu, L, Asano, Y, Hashizume, S, Aida, J, Imaeda, T, Okamoto, R, Jennings, A.J, Michinom, M, Kuroita, T, Stamford, A, Gao, P, Meinke, P, Glickman, J.F, Patel, D.J, Tuschl, T.
登録日2018-09-22
公開日2019-05-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Development of human cGAS-specific small-molecule inhibitors for repression of dsDNA-triggered interferon expression.
Nat Commun, 10, 2019
6MJX
DownloadVisualize
BU of 6mjx by Molmil
human cGAS catalytic domain bound with cGAMP
分子名称: Cyclic GMP-AMP synthase, ZINC ION, cGAMP
著者Lama, L, Adura, C, Xie, W, Tomita, D, Kamei, T, Kuryavyi, V, Gogakos, T, Steinberg, J.I, Miller, M, Ramos-Espiritu, L, Asano, Y, Hashizume, S, Aida, J, Imaeda, T, Okamoto, R, Jennings, A.J, Michinom, M, Kuroita, T, Stamford, A, Gao, P, Meinke, P, Glickman, J.F, Patel, D.J, Tuschl, T.
登録日2018-09-23
公開日2019-05-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Development of human cGAS-specific small-molecule inhibitors for repression of dsDNA-triggered interferon expression.
Nat Commun, 10, 2019
6NXF
DownloadVisualize
BU of 6nxf by Molmil
Crystal structure of mouse REC114 PH domain in complex with ANKRD31 C terminus
分子名称: Ankyrin repeat domain 31, Meiotic recombination protein REC114
著者Wang, J, Patel, D.J.
登録日2019-02-08
公開日2019-04-24
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2.791 Å)
主引用文献REC114 Partner ANKRD31 Controls Number, Timing, and Location of Meiotic DNA Breaks.
Mol.Cell, 74, 2019
1NEM
DownloadVisualize
BU of 1nem by Molmil
Saccharide-RNA recognition in the neomycin B / RNA aptamer complex
分子名称: 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranose, 2,6-diamino-2,6-dideoxy-beta-L-idopyranose-(1-3)-beta-D-ribofuranose, 2-DEOXY-D-STREPTAMINE, ...
著者Jiang, L, Majumdar, A, Hu, W, Jaishree, T.J, Xu, W, Patel, D.J.
登録日1999-03-15
公開日1999-08-31
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Saccharide-RNA recognition in a complex formed between neomycin B and an RNA aptamer
Structure Fold.Des., 7, 1999
1NTA
DownloadVisualize
BU of 1nta by Molmil
2.9 A crystal structure of Streptomycin RNA-aptamer
分子名称: 5'-R(*CP*GP*GP*CP*AP*CP*CP*AP*CP*GP*GP*UP*CP*GP*GP*AP*UP*C)-3', 5'-R(*GP*GP*AP*UP*CP*GP*CP*AP*UP*UP*UP*GP*GP*AP*CP*UP*UP*CP*UP*GP*CP*C)-3', BARIUM ION, ...
著者Tereshko, V, Skripkin, E, Patel, D.J.
登録日2003-01-29
公開日2003-05-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Encapsulating Streptomycin within a small 40-mer RNA
CHEM.BIOL., 10, 2003
6O6T
DownloadVisualize
BU of 6o6t by Molmil
Crystal structure of Csm6 H132A mutant
分子名称: Csm6
著者Jia, N, Patel, D.J.
登録日2019-03-07
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献CRISPR-Cas III-A Csm6 CARF Domain Is a Ring Nuclease Triggering Stepwise cA4Cleavage with ApA>p Formation Terminating RNase Activity.
Mol.Cell, 75, 2019
6O75
DownloadVisualize
BU of 6o75 by Molmil
Crystal structure of Csm1-Csm4 cassette in complex with pppApA
分子名称: CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), Csm4, MANGANESE (II) ION, ...
著者Jia, N, Patel, D.J.
登録日2019-03-07
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Second Messenger cA4Formation within the Composite Csm1 Palm Pocket of Type III-A CRISPR-Cas Csm Complex and Its Release Path.
Mol.Cell, 75, 2019

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon