Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7EBK
DownloadVisualize
BU of 7ebk by Molmil
Mouse Trim66 PHD-Bromo dual domain complexed with the H3(1-24)K9me3K18ac peptide
分子名称: H3K9me3K18ac, Tripartite motif-containing protein 66, ZINC ION
著者Wang, Z, Jiang, J.
登録日2021-03-09
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献A TRIM66/DAX1/Dux axis suppresses the totipotent 2-cell-like state in murine embryonic stem cells.
Cell Stem Cell, 29, 2022
7DL9
DownloadVisualize
BU of 7dl9 by Molmil
Crystal structure of nucleoside transporter NupG
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Nucleoside permease NupG
著者Wang, C, Xiao, Q.J, Deng, D.
登録日2020-11-26
公開日2021-04-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Molecular basis for substrate recognition by the bacterial nucleoside transporter NupG.
J.Biol.Chem., 296, 2021
7DLA
DownloadVisualize
BU of 7dla by Molmil
Crystal structure of nucleoside transporter NupG (D323A mutant)
分子名称: Nucleoside permease NupG
著者Wang, C, Xiao, Q.J, Deng, D.
登録日2020-11-26
公開日2021-04-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Molecular basis for substrate recognition by the bacterial nucleoside transporter NupG.
J.Biol.Chem., 296, 2021
7U87
DownloadVisualize
BU of 7u87 by Molmil
Product of 13mer primer with activated G monomer diastereomer 1
分子名称: 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(sulfanyl)phosphoryl]guanosine, MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*(G46)P*(G46))-3')
著者Fang, Z, Szostak, J.W.
登録日2022-03-08
公開日2023-03-15
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Catalytic Metal Ion-Substrate Coordination during Nonenzymatic RNA Primer Extension.
J.Am.Chem.Soc., 2024
7U88
DownloadVisualize
BU of 7u88 by Molmil
Product of 13mer primer with activated G monomer diastereomer 2
分子名称: 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(sulfanyl)phosphoryl]guanosine, RNA (5'-R(*(LKC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*(G46)P*(G46))-3'), SULFATE ION
著者Fang, Z, Szostak, J.W.
登録日2022-03-08
公開日2023-03-15
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Catalytic Metal Ion-Substrate Coordination during Nonenzymatic RNA Primer Extension.
J.Am.Chem.Soc., 2024
7U89
DownloadVisualize
BU of 7u89 by Molmil
Product of 14mer primer with activated G monomer diastereomer 1
分子名称: 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(sulfanyl)phosphoryl]guanosine, RNA (5'-R(*(LKC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*(G46))-3')
著者Fang, Z, Szostak, J.W.
登録日2022-03-08
公開日2023-03-15
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Catalytic Metal Ion-Substrate Coordination during Nonenzymatic RNA Primer Extension.
J.Am.Chem.Soc., 2024
7U8A
DownloadVisualize
BU of 7u8a by Molmil
Product of 14mer primer with activated G monomer diastereomer 2
分子名称: 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(sulfanyl)phosphoryl]guanosine, MAGNESIUM ION, RNA (5'-R(*(LKC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*(G46))-3')
著者Fang, Z, Szostak, J.W.
登録日2022-03-08
公開日2023-03-15
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Catalytic Metal Ion-Substrate Coordination during Nonenzymatic RNA Primer Extension.
J.Am.Chem.Soc., 2024
7EBJ
DownloadVisualize
BU of 7ebj by Molmil
Apo structure of the mouse Trim66 PHD-Bromo dual domain
分子名称: Tripartite motif-containing protein 66, ZINC ION
著者Wang, Z, Jiang, J.
登録日2021-03-09
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A TRIM66/DAX1/Dux axis suppresses the totipotent 2-cell-like state in murine embryonic stem cells.
Cell Stem Cell, 29, 2022
7UHE
DownloadVisualize
BU of 7uhe by Molmil
Taf14 ET domain in complex with C-terminal tail of Taf2
分子名称: C-terminal tail of Transcription initiation factor TFIID subunit 2, Transcription initiation factor TFIID subunit 14
著者Klein, B.J, Kutateladze, T.G.
登録日2022-03-26
公開日2022-08-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Taf2 mediates DNA binding of Taf14.
Nat Commun, 13, 2022
7FAX
DownloadVisualize
BU of 7fax by Molmil
Complex structure of TbLeo1 and LW domain from Trypanosoma brucei
分子名称: TbLW, TbLeo1 peptide
著者Liao, S, Gao, J, Tu, X.
登録日2021-07-07
公開日2022-07-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for evolutionarily conserved interactions between TFIIS and Paf1C.
Int.J.Biol.Macromol., 253, 2023
7WIA
DownloadVisualize
BU of 7wia by Molmil
The apo-form of THF-II C22G riboswitch
分子名称: RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WII
DownloadVisualize
BU of 7wii by Molmil
The THF-II riboswitch bound to NPR
分子名称: 2-AMINO-7,8-DIHYDRO-6-(1,2,3-TRIHYDROXYPROPYL)-4(1H)-PTERIDINONE, RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WI9
DownloadVisualize
BU of 7wi9 by Molmil
The THF-II riboswitch bound to THF and soaking with SeUrea
分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, RNA (50-MER), selenourea
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WIB
DownloadVisualize
BU of 7wib by Molmil
The THF-II riboswitch bound to THF
分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WIF
DownloadVisualize
BU of 7wif by Molmil
The THF-II riboswitch bound to H4B
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7WIE
DownloadVisualize
BU of 7wie by Molmil
The THF-II riboswitch bound to 7DG
分子名称: 7-DEAZAGUANINE, RNA (50-MER)
著者Xu, L, Fang, X, Xiao, Y.
登録日2022-01-03
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insights into translation regulation by the THF-II riboswitch.
Nucleic Acids Res., 51, 2023
7FAW
DownloadVisualize
BU of 7faw by Molmil
Structure of LW domain from Yeast
分子名称: Transcription elongation factor S-II
著者Liao, S, Gao, J, Tu, X.
登録日2021-07-07
公開日2022-07-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.438 Å)
主引用文献Structural basis for evolutionarily conserved interactions between TFIIS and Paf1C.
Int.J.Biol.Macromol., 253, 2023
7D4B
DownloadVisualize
BU of 7d4b by Molmil
Crystal structure of 4-1BB in complex with a VHH
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Wang, C.
登録日2020-09-23
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Generation of a safe and efficacious llama single-domain antibody fragment (vHH) targeting the membrane-proximal region of 4-1BB for engineering therapeutic bispecific antibodies for cancer.
J Immunother Cancer, 9, 2021
7CZD
DownloadVisualize
BU of 7czd by Molmil
Crystal structure of PD-L1 in complex with a VHH
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Programmed cell death 1 ligand 1, ...
著者Wang, C.
登録日2020-09-08
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Generation of a safe and efficacious llama single-domain antibody fragment (vHH) targeting the membrane-proximal region of 4-1BB for engineering therapeutic bispecific antibodies for cancer.
J Immunother Cancer, 9, 2021
7DGW
DownloadVisualize
BU of 7dgw by Molmil
De novo designed protein H4A2S
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, de novo designed protein H4A2S
著者Xu, Y, Liao, S, Chen, Q, Liu, H.
登録日2020-11-12
公開日2021-11-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7DGU
DownloadVisualize
BU of 7dgu by Molmil
De novo designed protein H4A1R
分子名称: de novo designed protein H4A1R
著者Xu, Y, Liao, S, Chen, Q, Liu, H.
登録日2020-11-12
公開日2021-11-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7DKK
DownloadVisualize
BU of 7dkk by Molmil
De novo design protein XM2H
分子名称: De novo design protein XM2H
著者Bin, H.
登録日2020-11-24
公開日2021-12-08
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7DKO
DownloadVisualize
BU of 7dko by Molmil
De novo design protein AM2M
分子名称: de novo designed protein AM2M
著者Bin, H.
登録日2020-11-25
公開日2021-12-08
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7DMF
DownloadVisualize
BU of 7dmf by Molmil
A de novo protein that rigidly extends the structure of tVHS-like domain in tepsin with a new designed domain
分子名称: Designed protein EXTD-3
著者Xu, Y.
登録日2020-12-03
公開日2021-12-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022
7DGY
DownloadVisualize
BU of 7dgy by Molmil
De novo designed protein H4C2R
分子名称: de novo designed protein H4C2R
著者Xu, Y, Liao, S, Chen, Q, Liu, H.
登録日2020-11-12
公開日2021-12-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A backbone-centred energy function of neural networks for protein design.
Nature, 602, 2022

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon