Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4CNN
DownloadVisualize
BU of 4cnn by Molmil
High resolution structure of Salmonella typhi type I dehydroquinase
分子名称: 3-DEHYDROQUINATE DEHYDRATASE, CHLORIDE ION, CITRIC ACID, ...
著者Otero, J.M, Llamas-Saiz, A.L, Maneiro, M, Peon, A, Lence, E, Lamb, H, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
登録日2014-01-23
公開日2015-02-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Mechanistic Insight Into the Reaction Catalyzed by Type I Dehydroquinase
To be Published
6A2T
DownloadVisualize
BU of 6a2t by Molmil
Mycobacterium tuberculosis LexA C-domain K197A
分子名称: ACRYLIC ACID, LexA repressor
著者Chandran, A.V, Srikalaivani, R, Paul, A, Vijayan, M.
登録日2018-06-12
公開日2019-01-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Biochemical characterization of Mycobacterium tuberculosis LexA and structural studies of its C-terminal segment.
Acta Crystallogr D Struct Biol, 75, 2019
6A6N
DownloadVisualize
BU of 6a6n by Molmil
Crystal structure of an inward-open apo state of the eukaryotic ABC multidrug transporter CmABCB1
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ATP-binding cassette, sub-family B, ...
著者Kato, H, Nakatsu, T, Kodan, A.
登録日2018-06-28
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.02 Å)
主引用文献Inward- and outward-facing X-ray crystal structures of homodimeric P-glycoprotein CmABCB1.
Nat Commun, 10, 2019
6A75
DownloadVisualize
BU of 6a75 by Molmil
Crystal structure of the complex of Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with Dephospho Coenzyme A at 2.75 A resolution
分子名称: CHLORIDE ION, DEPHOSPHO COENZYME A, MAGNESIUM ION, ...
著者Singh, P.K, Gupta, A, Kaur, P, Sharma, S, Singh, T.P.
登録日2018-07-02
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structure of the complex of Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with Dephospho Coenzyme A at 2.75 A resolution
To Be Published
4CSH
DownloadVisualize
BU of 4csh by Molmil
Native structure of the lytic CHAPK domain of the endolysin LysK from Staphylococcus aureus bacteriophage K
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
著者Sanz-Gaitero, M, Keary, R, Garcia-Doval, C, Coffey, A, van Raaij, M.J.
登録日2014-03-07
公開日2014-08-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Crystal structure of the lytic CHAP(K) domain of the endolysin LysK from Staphylococcus aureus bacteriophage K.
Virol. J., 11, 2014
6A7F
DownloadVisualize
BU of 6a7f by Molmil
The cryo-EM structure of filamentous bacteriophage IKe major coat protein p8 shell assembly.
分子名称: major coat protein p8
著者Xu, J.W, Dayan, N, Goldbourt, A, Xiang, Y.
登録日2018-07-03
公開日2019-02-27
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-electron microscopy structure of the filamentous bacteriophage IKe.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6A9U
DownloadVisualize
BU of 6a9u by Molmil
Crystal strcture of Icp55 from Saccharomyces cerevisiae bound to apstatin inhibitor
分子名称: Intermediate cleaving peptidase 55, MANGANESE (II) ION, apstatin
著者Singh, R, Kumar, A, Goyal, V.D, Makde, R.D.
登録日2018-07-16
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures and biochemical analyses of intermediate cleavage peptidase: role of dynamics in enzymatic function.
FEBS Lett., 593, 2019
6A89
DownloadVisualize
BU of 6a89 by Molmil
Crystal structure of the ternary complex of peptidoglycan recognition protein (PGRP-S) with Tartaric acid, Ribose and 2,6-DIAMINOPIMELIC ACID at 2.11 A resolution
分子名称: 1,2-ETHANEDIOL, 2,6-DIAMINOPIMELIC ACID, GLYCEROL, ...
著者Bairagya, H.R, Shokeen, A, Sharma, P, Singh, P.K, Sharma, S, Singh, T.P.
登録日2018-07-06
公開日2018-07-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Crystal structure of the ternary complex of peptidoglycan recognition protein (PGRP-S) with Tartaric acid, Ribose and 2,6-DIAMINOPIMELIC ACID at 2.11 A resolution
To Be Published
1S4Z
DownloadVisualize
BU of 1s4z by Molmil
HP1 chromo shadow domain in complex with PXVXL motif of CAF-1
分子名称: Chromatin assembly factor 1 subunit A, Chromobox protein homolog 1
著者Thiru, A, Nietlispach, D, Mott, H.R, Okuwaki, M, Lyon, D, Nielsen, P.R, Hirshberg, M, Verreault, A, Murzina, N.V, Laue, E.D.
登録日2004-01-19
公開日2004-03-23
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural basis of HP1/PXVXL motif peptide interactions and HP1 localisation to heterochromatin.
Embo J., 23, 2004
4CKR
DownloadVisualize
BU of 4ckr by Molmil
Crystal structure of the human DDR1 kinase domain in complex with DDR1-IN-1
分子名称: 1,2-ETHANEDIOL, 4-[(4-ethylpiperazin-1-yl)methyl]-n-{4-methyl-3-[(2-oxo-2,3-dihydro-1h-indol-5-yl)oxy]phenyl}-3-(trifluoromethyl)benzamide, EPITHELIAL DISCOIDIN DOMAIN-CONTAINING RECEPTOR 1
著者Canning, P, Elkins, J.M, Goubin, S, Mahajan, P, Krojer, T, Newman, J.A, Dixon-Clarke, S, Chaikuad, A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.
登録日2014-01-07
公開日2014-01-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery of a Potent and Selective Ddr1 Receptor Tyrosine Kinase Inhibitor.
Acs Chem.Biol., 8, 2013
6A9V
DownloadVisualize
BU of 6a9v by Molmil
Crystal structure of Icp55 from Saccharomyces cerevisiae (N-terminal 42 residues deletion)
分子名称: GLYCINE, Intermediate cleaving peptidase 55, MANGANESE (II) ION, ...
著者Singh, R, Kumar, A, Goyal, V.D, Makde, R.D.
登録日2018-07-16
公開日2019-01-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structures and biochemical analyses of intermediate cleavage peptidase: role of dynamics in enzymatic function.
FEBS Lett., 593, 2019
1S9I
DownloadVisualize
BU of 1s9i by Molmil
X-ray structure of the human mitogen-activated protein kinase kinase 2 (MEK2)in a complex with ligand and MgATP
分子名称: 5-{3,4-DIFLUORO-2-[(2-FLUORO-4-IODOPHENYL)AMINO]PHENYL}-N-(2-MORPHOLIN-4-YLETHYL)-1,3,4-OXADIAZOL-2-AMINE, ADENOSINE-5'-TRIPHOSPHATE, Dual specificity mitogen-activated protein kinase kinase 2, ...
著者Ohren, J.F, Chen, H, Pavlovsky, A, Whitehead, C, Yan, C, McConnell, P, Delaney, A, Dudley, D.T, Sebolt-Leopold, J, Hasemann, C.A.
登録日2004-02-04
公開日2004-11-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structures of human MAP kinase kinase 1 (MEK1) and MEK2 describe novel noncompetitive kinase inhibition.
Nat.Struct.Mol.Biol., 11, 2004
6ABZ
DownloadVisualize
BU of 6abz by Molmil
Crystal Structure of HEWL in deionized water
分子名称: CHLORIDE ION, Lysozyme C, S-1,2-PROPANEDIOL, ...
著者Seyedarabi, A, Seraj, Z.
登録日2018-07-24
公開日2019-07-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The role of Cinnamaldehyde and Phenyl ethyl alcohol as two types of precipitants affecting protein hydration levels.
Int.J.Biol.Macromol., 146, 2019
4CLM
DownloadVisualize
BU of 4clm by Molmil
Structure of Salmonella typhi type I dehydroquinase irreversibly inhibited with a 1,3,4-trihydroxyciclohexane-1-carboxylic acid derivative
分子名称: (1~{S},3~{S},4~{R},5~{R})-3-methyl-1,4,5-tris(hydroxyl)cyclohexane-1-carboxylic acid, 3-DEHYDROQUINATE DEHYDRATASE, CHLORIDE ION, ...
著者Otero, J.M, Llamas-Saiz, A.L, Tizon, L, Maneiro, M, Lence, E, Poza, S, Lamb, H, Hawkins, A.R, Blanco, B, Sedes, A, Peon, A, Gonzalez-Bello, C, van Raaij, M.J.
登録日2014-01-15
公開日2014-11-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Irreversible covalent modification of type I dehydroquinase with a stable Schiff base.
Org. Biomol. Chem., 13, 2015
6AGR
DownloadVisualize
BU of 6agr by Molmil
Structure of HEWL co-crystallised with phenylethyl alcohol
分子名称: 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, ACETATE ION, ...
著者Seyedarabi, A, Seraj, Z.
登録日2018-08-13
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献The role of Cinnamaldehyde and Phenyl ethyl alcohol as two types of precipitants affecting protein hydration levels.
Int.J.Biol.Macromol., 146, 2019
5ZRO
DownloadVisualize
BU of 5zro by Molmil
M. smegmatis antimutator protein MutT2 in complex with 5mdCTP
分子名称: 1,2-ETHANEDIOL, 2'-DEOXY-5-METHYLCYTIDINE 5'-(TETRAHYDROGEN TRIPHOSPHATE), Putative mutator protein MutT2/NUDIX hydrolase
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
5ZWE
DownloadVisualize
BU of 5zwe by Molmil
Covalent bond formation between histidine of Vitamin D receptor (VDR) and a full agonist having a vinyl ketone group via conjugate addition reaction
分子名称: (6R)-6-[(1R,3aS,4E,7aR)-7a-methyl-4-[2-[(3R,5R)-4-methylidene-3,5-bis(oxidanyl)cyclohexylidene]ethylidene]-2,3,3a,5,6,7-hexahydro-1H-inden-1-yl]hept-1-en-3-one, 13-meric peptide from DRIP205 NR2 BOX peptide, Vitamin D3 receptor
著者Yoshizawa, M, Itoh, T, Anami, Y, Kato, A, Yoshimoto, N, Yamamoto, K.
登録日2018-05-15
公開日2018-07-18
最終更新日2018-08-08
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Identification of the Histidine Residue in Vitamin D Receptor That Covalently Binds to Electrophilic Ligands
J. Med. Chem., 61, 2018
6AIF
DownloadVisualize
BU of 6aif by Molmil
Crystal structure of M120A mutant of O-acetylserine sulfhydrylase from Haemophilus influenzae in complex with high affinity inhibitory peptide from serine acetyl transferase of Salmonella typhimurium
分子名称: Cysteine synthase, Peptide from Serine acetyltransferase
著者Singh, R.P, Kaushik, A.
登録日2018-08-23
公開日2018-09-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of M120A mutant of O-acetylserine sulfhydrylase from Haemophilus influenzae in complex with high affinity inhibitory peptide from serine acetyl transferase of Salmonella typhimurium
To Be Published
5ZYB
DownloadVisualize
BU of 5zyb by Molmil
Crystal structure of MOX-1 complexed with a boronic acid transition state inhibitor S02030
分子名称: 1-{(2R)-2-(dihydroxyboranyl)-2-[(thiophen-2-ylacetyl)amino]ethyl}-1H-1,2,3-triazole-4-carboxylic acid, ACETATE ION, Beta-lactamase, ...
著者Shimizu-Ibuka, A, Furukawa, N.
登録日2018-05-23
公開日2019-06-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structure of MOX-1 complexed with a boronic acid transition state inhibitor S02030
To Be Published
6AL5
DownloadVisualize
BU of 6al5 by Molmil
COMPLEX BETWEEN CD19 (N138Q MUTANT) AND B43 FAB
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, B-lymphocyte antigen CD19, B43 HEAVY CHAIN, ...
著者Teplyakov, A, Obmolova, G, Gilliland, G.L.
登録日2017-08-07
公開日2018-03-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of B-cell co-receptor CD19 in complex with antibody B43 reveals an unexpected fold.
Proteins, 86, 2018
6A1Q
DownloadVisualize
BU of 6a1q by Molmil
Crystal structures of disordered Z-type helices
分子名称: DNA (5'-D(P*CP*AP*CP*A)-3'), DNA (5'-D(P*TP*GP*TP*G)-3')
著者Karthik, S, Mandal, P.K, Thirugnanasambandam, A, Gautham, N.
登録日2018-06-07
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Crystal structures of disordered Z-type helices.
Nucleosides Nucleotides Nucleic Acids, 38, 2019
6A8I
DownloadVisualize
BU of 6a8i by Molmil
Crystal structure of endo-arabinanase ABN-TS D147N mutant in complex with arabinohexaose
分子名称: CALCIUM ION, alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose, endo-alpha-(1->5)-L-arabinanase
著者Yamaguchi, A, Tada, T.
登録日2018-07-09
公開日2018-12-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of endo-1,5-alpha-L-arabinanase mutants from Bacillus thermodenitrificans TS-3 in complex with arabino-oligosaccharides.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6A8U
DownloadVisualize
BU of 6a8u by Molmil
PhoQ sensor domain (wild type): analysis of internal cavity
分子名称: Sensor protein PhoQ
著者Yoshitani, K, Ishii, E, Taniguchi, K, Sugimoto, H, Shiro, Y, Mori, H, Akiyama, Y, Kato, A, Utsumi, R, Eguchi, Y.
登録日2018-07-10
公開日2019-01-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.848 Å)
主引用文献Identification of an internal cavity in the PhoQ sensor domain for PhoQ activity and SafA-mediated control.
Biosci. Biotechnol. Biochem., 83, 2019
4BNI
DownloadVisualize
BU of 4bni by Molmil
Crystal structure of S. aureus FabI in complex with NADP and 2-(2- aminophenoxy)-5-hexylphenol
分子名称: 2-(2-azanylphenoxy)-5-hexyl-phenol, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADPH], GLUTAMIC ACID, ...
著者Schiebel, J, Chang, A, Bommineni, G.R, Tonge, P.J, Kisker, C.
登録日2013-05-15
公開日2013-06-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Rational Optimization of Drug-Target Residence Time: Insights from Inhibitor Binding to the S. Aureus Fabi Enzyme-Product Complex.
Biochemistry, 52, 2013
2JDU
DownloadVisualize
BU of 2jdu by Molmil
Mutant (G24N) of Pseudomonas aeruginosa lectin II (PA-IIL) complexed with methyl-a-L-fucopyranoside
分子名称: CALCIUM ION, FUCOSE-BINDING LECTIN PA-IIL, GLYCEROL, ...
著者Adam, J, Pokorna, M, Sabin, C, Mitchell, E.P, Imberty, A, Wimmerova, M.
登録日2007-01-12
公開日2007-06-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Engineering of Pa-Iil Lectin from Pseudomonas Aeruginosa - Unravelling the Role of the Specificity Loop for Sugar Preference.
Bmc Struct.Biol., 7, 2007

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon