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8P4D
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BU of 8p4d by Molmil
Structural insights into human co-transcriptional capping - structure 4
分子名称: DNA (32-MER), DNA (41-MER), DNA-directed RNA polymerase II subunit E, ...
著者Garg, G, Dienemann, C, Farnung, L, Schwarz, J, Linden, A, Urlaub, H, Cramer, P.
登録日2023-05-20
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural insights into human co-transcriptional capping.
Mol.Cell, 83, 2023
4C2C
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BU of 4c2c by Molmil
Crystal structure of the protease CtpB in an active state
分子名称: CARBOXY-TERMINAL PROCESSING PROTEASE CTPB, PEPTIDE1, PEPTIDE2
著者Mastny, M, Heuck, A, Kurzbauer, R, Clausen, T.
登録日2013-08-17
公開日2013-12-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Ctpb Assembles a Gated Protease Tunnel Regulating Cell-Cell Signaling During Spore Formation in Bacillus Subtilis.
Cell(Cambridge,Mass.), 155, 2013
5XPM
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BU of 5xpm by Molmil
Crystal structure of VDR-LBD complexed with 22S-Butyl-25RS-(hydroxyphenyl)-25-methoxy-2-methylidene-19,26,27-trinor-1-hydroxyvitamin D3
分子名称: (1~{R},3~{R})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-1-[(2~{R},3~{S})-3-[(3~{S})-3-(4-hydroxyphenyl)-3-methoxy-propyl]heptan-2-yl]-7~{a}-methyl-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol, Mediator of RNA polymerase II transcription subunit 1, Vitamin D3 receptor
著者Kato, A, Itoh, T, Yamamoto, K.
登録日2017-06-03
公開日2018-06-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Vitamin D Analogues with a p-Hydroxyphenyl Group at the C25 Position: Crystal Structure of Vitamin D Receptor Ligand-Binding Domain Complexed with the Ligand Explains the Mechanism Underlying Full Antagonistic Action
J. Med. Chem., 60, 2017
1TDQ
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BU of 1tdq by Molmil
Structural basis for the interactions between tenascins and the C-type lectin domains from lecticans: evidence for a cross-linking role for tenascins
分子名称: Aggrecan core protein, CALCIUM ION, Tenascin-R
著者Lundell, A, Olin, A.I, Moergelin, M, al-Karadaghi, S, Aspberg, A, Logan, D.T.
登録日2004-05-24
公開日2004-08-31
最終更新日2021-03-31
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for interactions between tenascins and lectican C-type lectin domains: evidence for a crosslinking role for tenascins
Structure, 12, 2004
4BNJ
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Crystal structure of S. aureus FabI in complex with NADP and 5-methyl- 2-phenoxyphenol
分子名称: 5-methyl-2-phenoxyphenol, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADPH], GLUTAMIC ACID, ...
著者Schiebel, J, Chang, A, Bommineni, G.R, Tonge, P.J, Kisker, C.
登録日2013-05-15
公開日2013-06-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Rational Optimization of Drug-Target Residence Time: Insights from Inhibitor Binding to the S. Aureus Fabi Enzyme-Product Complex.
Biochemistry, 52, 2013
8OSF
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BU of 8osf by Molmil
AAA+ motor subunit ChlI of magnesium chelatase, hexamer conformation A
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Shvarev, D, Moeller, A.
登録日2023-04-18
公開日2023-09-06
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Conformational variability of cyanobacterial ChlI, the AAA+ motor of magnesium chelatase involved in chlorophyll biosynthesis.
Mbio, 14, 2023
8OSG
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AAA+ motor subunit ChlI of magnesium chelatase, hexamer conformation B
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Shvarev, D, Moeller, A.
登録日2023-04-18
公開日2023-09-06
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Conformational variability of cyanobacterial ChlI, the AAA+ motor of magnesium chelatase involved in chlorophyll biosynthesis.
Mbio, 14, 2023
8OYK
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BU of 8oyk by Molmil
Coiled-Coil Domain of Human STIL, L736E Mutant
分子名称: CHLORIDE ION, Isoform 2 of SCL-interrupting locus protein
著者Martin, F.J.O, Shamir, M, Woolfson, D.N, Friedler, A.
登録日2023-05-05
公開日2023-10-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular Mechanism of STIL Coiled-Coil Domain Oligomerization.
Int J Mol Sci, 24, 2023
5Z1M
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BU of 5z1m by Molmil
Crystal structure of the complex of trimeric Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with citrate ion at 1.87 A resolution
分子名称: CITRIC ACID, Phosphopantetheine adenylyltransferase
著者Singh, P.K, Gupta, A, Kaur, P, Sharma, S, Singh, T.P.
登録日2017-12-26
公開日2018-02-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal structure of the complex of trimeric Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with citrate ion at 1.87 A resolution
To Be Published
5Z21
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BU of 5z21 by Molmil
The ternary structure of D-lactate dehydrogenase from Fusobacterium nucleatum with NADH and oxamate
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, D-lactate dehydrogenase, OXAMIC ACID
著者Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H.
登録日2017-12-28
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria.
Biochemistry, 57, 2018
8OYL
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BU of 8oyl by Molmil
Coiled-Coil Domain of Human STIL, Q729L Mutant
分子名称: CADMIUM ION, CHLORIDE ION, SCL-interrupting locus protein, ...
著者Martin, F.J.O, Shamir, M, Woolfson, D.N, Friedler, A.
登録日2023-05-05
公開日2023-10-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Molecular Mechanism of STIL Coiled-Coil Domain Oligomerization.
Int J Mol Sci, 24, 2023
8P33
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BB0238 from Borrelia burgdorferi
分子名称: BB0238
著者Brangulis, K, Foor, S.D, Shakya, A.K, Rana, V.S, Bista, S, Kitsou, C, Ronzetti, M, Linden, S.B, Altieri, A.S, Akopjana, I, Baljinnyam, B, Nelson, D.C, Simeonov, A, Herzberg, O, Caimano, M.J, Pal, U.
登録日2023-05-16
公開日2023-10-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A unique borrelial protein facilitates microbial immune evasion.
Mbio, 14, 2023
8P32
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BB0238 from Borrelia burgdorferi, Se-Met data for Leu240Met mutant
分子名称: BB0238
著者Brangulis, K, Foor, S.D, Shakya, A.K, Rana, V.S, Bista, S, Kitsou, C, Ronzetti, M, Linden, S.B, Altieri, A.S, Akopjana, I, Baljinnyam, B, Nelson, D.C, Simeonov, A, Herzberg, O, Caimano, M.J, Pal, U.
登録日2023-05-16
公開日2023-10-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A unique borrelial protein facilitates microbial immune evasion.
Mbio, 14, 2023
8P52
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BU of 8p52 by Molmil
Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin
分子名称: Toxin protein
著者Belyy, A, Heilen, P, Hofnagel, O, Raunser, S.
登録日2023-05-23
公開日2023-11-01
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure and activation mechanism of the Makes caterpillars floppy 1 toxin.
Nat Commun, 14, 2023
6CPF
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BU of 6cpf by Molmil
Structure of dephosphorylated Aurora A (122-403) bound to AMPPCP in an active conformation
分子名称: Aurora kinase A, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
著者Otten, R, Zorba, A, Padua, R.A.P, Kern, D.
登録日2018-03-13
公開日2018-06-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Dynamics of human protein kinase Aurora A linked to drug selectivity.
Elife, 7, 2018
8OTX
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BU of 8otx by Molmil
Cryo-EM structure of Strongylocentrotus purpuratus sperm-specific Na+/H+ exchanger SLC9C1 in nanodisc
分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, Sperm-specific sodium proton exchanger
著者Yeo, H, Mehta, V, Gulati, A, Drew, D.
登録日2023-04-21
公開日2023-11-01
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Structure and electromechanical coupling of a voltage-gated Na + /H + exchanger.
Nature, 623, 2023
8P66
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Structural basis of aggregate binding/recognition by the AAA+ disaggregase ClpG
分子名称: Clp protease ClpC,Heat shock survival AAA family ATPase ClpK, ZINC ION
著者Simon, B, Hennig, J, Mogk, A.
登録日2023-05-25
公開日2023-11-01
最終更新日2023-11-22
実験手法SOLUTION NMR
主引用文献Structural basis of aggregate binding by the AAA+ disaggregase ClpG.
J.Biol.Chem., 299, 2023
8OTW
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Cryo-EM structure of Strongylocentrotus purpuratus SLC9C1 in presence of cAMP
分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Sperm-specific sodium proton exchanger
著者Yeo, H, Mehta, V, Gulati, A, Drew, D.
登録日2023-04-21
公開日2023-11-01
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Structure and electromechanical coupling of a voltage-gated Na + /H + exchanger.
Nature, 623, 2023
5ZBB
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BU of 5zbb by Molmil
Crystal structure of Rtt109-Asf1-H3-H4 complex
分子名称: DI(HYDROXYETHYL)ETHER, DNA damage response protein Rtt109, putative, ...
著者Zhang, L, Serra-Cardona, A, Zhou, H, Wang, M, Yang, N, Zhang, Z, Xu, R.M.
登録日2018-02-10
公開日2018-07-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Multisite Substrate Recognition in Asf1-Dependent Acetylation of Histone H3 K56 by Rtt109.
Cell, 174, 2018
8P50
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Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin with the C-terminal deletion in complex with Arf3
分子名称: ADP-ribosylation factor 3, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Belyy, A, Heilen, P, Hofnagel, O, Raunser, S.
登録日2023-05-23
公開日2023-11-01
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (4.04 Å)
主引用文献Structure and activation mechanism of the Makes caterpillars floppy 1 toxin.
Nat Commun, 14, 2023
8OTQ
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Cryo-EM structure of Strongylocentrotus purpuratus sperm-specific Na+/H+ exchanger SLC9C1 in GDN
分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, PALMITIC ACID, Sperm-specific sodium proton exchanger
著者Yeo, H, Mehta, V, Gulati, A, Drew, D.
登録日2023-04-21
公開日2023-11-01
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Structure and electromechanical coupling of a voltage-gated Na + /H + exchanger.
Nature, 623, 2023
5ZEH
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Crystal structure of Entamoeba histolytica Arginase in complex with L- Ornithine at 2.35 A
分子名称: 1,2-ETHANEDIOL, Arginase, L-ornithine, ...
著者Malik, A, Dalal, V, Ankri, S, Tomar, S.
登録日2018-02-27
公開日2019-06-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Structural insights into Entamoeba histolytica arginase and structure-based identification of novel non-amino acid based inhibitors as potential antiamoebic molecules.
Febs J., 286, 2019
8P51
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Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin with the C-terminal deletion
分子名称: Toxin protein
著者Belyy, A, Heilen, P, Hofnagel, O, Raunser, S.
登録日2023-05-23
公開日2023-11-01
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3.55 Å)
主引用文献Structure and activation mechanism of the Makes caterpillars floppy 1 toxin.
Nat Commun, 14, 2023
1URC
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Cyclin A binding groove inhibitor Ace-Arg-Lys-Leu-Phe-Gly
分子名称: CELL DIVISION PROTEIN KINASE 2, CYCLIN A2, PEPTIDE INHIBITOR
著者Kontopidis, G, Andrews, M, McInnes, C, Cowan, A, Powers, H, Innes, L, Plater, A, Griffiths, G, Paterson, D, Zheleva, D, Lane, D, Green, S, Walkinshaw, M, Fischer, P.
登録日2003-10-28
公開日2003-10-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Design, synthesis, biological activity and structural analysis of cyclic peptide inhibitors targeting the substrate recruitment site of cyclin-dependent kinase complexes.
Org. Biomol. Chem., 2, 2004
5ZN0
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BU of 5zn0 by Molmil
Joint X-ray/neutron structure of protein kinase ck2 alpha subunit
分子名称: Casein kinase II subunit alpha, SULFATE ION
著者Shibazaki, C, Arai, S, Shimizu, R, Kinoshita, T, Ostermann, A, Schrader, T.E, Sunami, T, Kuroki, R, Adachi, M.
登録日2018-04-07
公開日2018-11-21
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (1.1 Å), X-RAY DIFFRACTION
主引用文献Hydration Structures of the Human Protein Kinase CK2 alpha Clarified by Joint Neutron and X-ray Crystallography.
J. Mol. Biol., 430, 2018

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