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6D07
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BU of 6d07 by Molmil
Crystal structure of the complex between human chromobox homolog 1 (CBX1) and H3K9me3 peptide
分子名称: Chromobox protein homolog 1, GLYCEROL, Histone H3.1
著者Arora, S, Horne, W.S, Islam, K.
登録日2018-04-10
公開日2019-04-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Engineering Methyllysine Writers and Readers for Allele-Specific Regulation of Protein-Protein Interactions.
J.Am.Chem.Soc., 141, 2019
6D9F
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BU of 6d9f by Molmil
Protein 60 with aldehyde deformylating oxidase activity from Kitasatospora setae
分子名称: 1,2-ETHANEDIOL, FE (III) ION, Putative VlmB homolog, ...
著者Arenas, R, Wilson, D.K, Mak, W.S, Siegel, J.B.
登録日2018-04-28
公開日2019-05-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Discovery, Design, and Structural Characterization of Alkane-Producing Enzymes across the Ferritin-like Superfamily.
Biochemistry, 59, 2020
4A1U
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BU of 4a1u by Molmil
Crystal structure of alpha-beta-foldamer 2c in complex with Bcl-xL
分子名称: ALPHA-BETA-FOLDAMER 2C, BCL-2-LIKE PROTEIN 1, CHLORIDE ION, ...
著者Boersma, M.D, Haase, H.S, Kaufman, K.J, Horne, W.S, Lee, E.F, Clarke, O.B, Smith, B.J, Colman, P.M, Gellman, S.H, Fairlie, W.D.
登録日2011-09-20
公開日2011-12-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Evaluation of Diverse Alpha/Beta-Backbone Patterns for Functional Alpha-Helix Mimicry: Analogues of the Bim Bh3 Domain.
J.Am.Chem.Soc., 134, 2012
4A1W
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BU of 4a1w by Molmil
Crystal structure of alpha-beta foldamer 4c in complex with Bcl-xL
分子名称: ALPHA-BETA-FOLDAMER 2C, BCL-2-LIKE PROTEIN 1
著者Boersma, M.D, Haase, H.S, Kaufman, K.J, Horne, W.S, Lee, E.F, Clarke, O.B, Smith, B.J, Colman, P.M, Gellman, S.H, Fairlie, W.D.
登録日2011-09-20
公開日2011-12-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.497 Å)
主引用文献Evaluation of Diverse Alpha/Beta-Backbone Patterns for Functional Alpha-Helix Mimicry: Analogues of the Bim Bh3 Domain.
J.Am.Chem.Soc., 134, 2012
2ERB
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BU of 2erb by Molmil
AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG
分子名称: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, MAGNESIUM ION, odorant binding protein
著者Wogulis, M, Morgan, T, Ishida, Y, Leal, W.S, Wilson, D.K.
登録日2005-10-24
公開日2005-12-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The crystal structure of an odorant binding protein from Anopheles gambiae: Evidence for a common ligand release mechanism.
Biochem.Biophys.Res.Commun., 339, 2006
2DW7
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BU of 2dw7 by Molmil
Crystal structure of D-tartrate dehydratase from Bradyrhizobium japonicum complexed with Mg++ and meso-tartrate
分子名称: Bll6730 protein, MAGNESIUM ION, S,R MESO-TARTARIC ACID
著者Fedorov, A.A, Fedorov, E.V, Yew, W.S, Wood, B.M, Gerlt, J.A, Almo, S.C.
登録日2006-08-07
公開日2006-12-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Evolution of Enzymatic Activities in the Enolase Superfamily: d-Tartrate Dehydratase from Bradyrhizobium japonicum
Biochemistry, 45, 2006
2FJY
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BU of 2fjy by Molmil
Crystal Structure of B-form Bombyx mori Pheromone Binding Protein
分子名称: Pheromone-binding protein
著者Lautenschlager, C, Leal, W.S, Clardy, J.
登録日2006-01-03
公開日2006-01-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Coil-to-helix transition and ligand release of Bombyx mori pheromone-binding protein.
Biochem.Biophys.Res.Commun., 335, 2005
5BMI
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BU of 5bmi by Molmil
Nitroxide Spin Labels in Protein GB1: T44 Mutant, Crystal Form A
分子名称: Immunoglobulin G-binding protein G, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate
著者Cunningham, T.C, Horne, W.S, Saxena, S.
登録日2015-05-22
公開日2016-04-06
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Rotameric preferences of a protein spin label at edge-strand beta-sheet sites.
Protein Sci., 25, 2016
4YJY
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BU of 4yjy by Molmil
Crystal structure of Type III polyketide synthase from Oryza sativa
分子名称: Chalcone synthase 1
著者Wongsantichon, J, Robinson, R.C, Yew, W.S.
登録日2015-03-03
公開日2016-02-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Synthetic Polyketide Enzymology: Platform for Biosynthesis of Antimicrobial Polyketides
Acs Catalysis, 5, 2015
5BT2
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BU of 5bt2 by Molmil
MeCP2 MBD domain (A140V) in complex with methylated DNA
分子名称: DNA (5'-D(*AP*TP*AP*GP*AP*AP*GP*AP*AP*TP*TP*CP*(5CM)P*GP*TP*TP*CP*CP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*GP*GP*AP*AP*(5CM)P*GP*GP*AP*AP*TP*TP*CP*TP*TP*CP*TP*A)-3'), Methyl-CpG-binding protein 2
著者Ho, K.L, Chia, J.Y, Tan, W.S, Ng, C.L, Hu, N.J, Foo, H.L.
登録日2015-06-02
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A/T Run Geometry of B-form DNA Is Independent of Bound Methyl-CpG Binding Domain, Cytosine Methylation and Flanking Sequence.
Sci Rep, 6, 2016
5BMH
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BU of 5bmh by Molmil
Nitroxide Spin Labels in Protein GB1: T44 Mutant, Crystal Form B
分子名称: Immunoglobulin G-binding protein G, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate
著者Cunningham, T.C, Horne, W.S, Saxena, S.
登録日2015-05-22
公開日2016-04-06
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Rotameric preferences of a protein spin label at edge-strand beta-sheet sites.
Protein Sci., 25, 2016
1SQ0
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BU of 1sq0 by Molmil
Crystal Structure of the Complex of the Wild-type Von Willebrand Factor A1 domain and Glycoprotein Ib alpha at 2.6 Angstrom Resolution
分子名称: Platelet glycoprotein Ib alpha chain (Glycoprotein Ibalpha) (GP-Ib alpha) (GPIbA) (GPIb-alpha) (CD42B-alpha) (CD42B) [Contains: Glycocalicin], Von Willebrand factor (vWF) [Contains: Von Willebrand antigen II]
著者Dumas, J.J, Kumar, R, McDonagh, T, Sullivan, F, Stahl, M.L, Somers, W.S, Mosyak, L.
登録日2004-03-17
公開日2004-04-13
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the wild-type von Willebrand factor A1-glycoprotein Ibalpha complex reveals conformation differences with a complex bearing von Willebrand disease mutations
J.Biol.Chem., 279, 2004
1I7E
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BU of 1i7e by Molmil
C-Terminal Domain Of Mouse Brain Tubby Protein bound to Phosphatidylinositol 4,5-bis-phosphate
分子名称: L-ALPHA-GLYCEROPHOSPHO-D-MYO-INOSITOL-4,5-BIS-PHOSPHATE, TUBBY PROTEIN
著者Santagata, S, Boggon, T.J, Baird, C.L, Shan, W.S, Shapiro, L.
登録日2001-03-08
公開日2001-06-27
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献G-protein signaling through tubby proteins.
Science, 292, 2001
5GY2
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BU of 5gy2 by Molmil
Crystal structure of a complex between Bacillus subtilis flagellin and zebrafish Toll-like receptor 5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Flagellin, ...
著者Song, W.S, Yoon, S.I.
登録日2016-09-21
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A conserved TLR5 binding and activation hot spot on flagellin
Sci Rep, 7, 2017
8G0X
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BU of 8g0x by Molmil
Backbone modifications in the inter-helix loop of designed miniprotein oPPalpha: Pro10DPro11 turn
分子名称: Designed miniprotein oPPalpha: Pro10DPro11 turn
著者Harmon, T.W, Horne, W.S.
登録日2023-02-01
公開日2023-04-05
最終更新日2023-06-28
実験手法SOLUTION NMR
主引用文献Protein Backbone Alteration in Non-Hairpin beta-Turns: Impacts on Tertiary Folded Structure and Folded Stability.
Chembiochem, 24, 2023
8FLJ
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BU of 8flj by Molmil
Cas1-Cas2/3 integrase and IHF bound to CRISPR leader, repeat and foreign DNA
分子名称: CRISPR leader and repeat, anti-sense strand of DNA, CRISPR leader, ...
著者Santiago-Frangos, A, Henriques, W.S, Wiegand, T, Gauvin, C, Buyukyoruk, M, Neselu, K, Eng, E.T, Lander, G.C, Wiedenheft, B.
登録日2022-12-21
公開日2023-09-06
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3.48 Å)
主引用文献Structure reveals why genome folding is necessary for site-specific integration of foreign DNA into CRISPR arrays.
Nat.Struct.Mol.Biol., 30, 2023
8FHB
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Protein 32 with aldehyde deformylating oxidase activity from Synechococcus sp.
分子名称: FE (III) ION, tRNA-(MS[2]IO[6]A)-hydroxylase
著者Arenas, R, Wilson, D.K, Mak, W.S, Siegel, J.B.
登録日2022-12-13
公開日2023-12-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Protein 32 with aldehyde deformylating oxidase activity from Synechococcus sp.
To Be Published
8FHC
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Protein 41 with aldehyde deformylating oxidase activity from Gamma proteobacterium
分子名称: BROMIDE ION, CHOLIC ACID, FE (III) ION, ...
著者Arenas, R, Wilson, D.K, Mak, W.S, Siegel, J.B.
登録日2022-12-13
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Protein 41 with aldehyde deformylating oxidase activity from Gamma proteobacterium
To Be Published
8GR2
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Crystal structure of the GDSL-family esterase CJ0610C from Campylobacter jejuni
分子名称: DUF459 domain-containing protein, SULFATE ION
著者Ki, D.U, Song, W.S, Yoon, S.I.
登録日2022-08-31
公開日2022-11-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and biochemical analysis of the GDSL-family esterase CJ0610C from Campylobacter jejuni.
Biochem.Biophys.Res.Commun., 631, 2022
8H2C
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Crystal structure of the pseudaminic acid synthase PseI from Campylobacter jejuni
分子名称: MANGANESE (II) ION, Pseudaminic acid synthase
著者Song, W.S, Park, M.A, Ki, D.U, Yoon, S.I.
登録日2022-10-05
公開日2022-11-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural analysis of the pseudaminic acid synthase PseI from Campylobacter jejuni.
Biochem.Biophys.Res.Commun., 635, 2022
5H5V
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BU of 5h5v by Molmil
Crystal structure of the flagellar cap protein FliD D1-D2-D3 domains from Escherichia coli
分子名称: Flagellar hook-associated protein 2
著者Song, W.S, Cho, S.Y, Hong, H.J, Yoon, S.I.
登録日2016-11-09
公開日2017-02-22
最終更新日2017-04-05
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Self-Oligomerizing Structure of the Flagellar Cap Protein FliD and Its Implication in Filament Assembly.
J. Mol. Biol., 429, 2017
5HFY
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Backbone Modifications in the Protein GB1 Helix: beta-2-Ala24, beta-3-Lys28, beta-3-Lys31, beta-3-Asn35
分子名称: Immunoglobulin G-binding protein G
著者Tavenor, N.A, Reinert, Z.E, Lengyel, G.A, Griffith, B.D, Horne, W.S.
登録日2016-01-07
公開日2016-02-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Comparison of design strategies for alpha-helix backbone modification in a protein tertiary fold.
Chem.Commun.(Camb.), 52, 2016
5HG2
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Backbone Modifications in the Protein GB1 Helix: beta-3-Ala24, beta-3-Lys28, beta-3-Lys31, beta-2-Asn35
分子名称: GLYCEROL, Immunoglobulin G-binding protein G, MAGNESIUM ION
著者Tavenor, N.A, Reinert, Z.E, Lengyel, G.A, Griffith, B.D, Horne, W.S.
登録日2016-01-07
公開日2016-02-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Comparison of design strategies for alpha-helix backbone modification in a protein tertiary fold.
Chem.Commun.(Camb.), 52, 2016
8G0Y
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Backbone modifications in the inter-helix loop of designed miniprotein oPPalpha: Iva10Asn11 turn
分子名称: Designed miniprotein oPPalpha: Iva10Asn11 turn
著者Harmon, T.W, Horne, W.S.
登録日2023-02-01
公開日2023-04-05
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Protein Backbone Alteration in Non-Hairpin beta-Turns: Impacts on Tertiary Folded Structure and Folded Stability.
Chembiochem, 24, 2023
5H5W
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Crystal structure of the flagellar cap protein FliD D2-D3 domains from Escherichia coli
分子名称: Flagellar hook-associated protein 2
著者Song, W.S, Cho, S.Y, Hong, H.J, Yoon, S.I.
登録日2016-11-09
公開日2017-02-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Self-Oligomerizing Structure of the Flagellar Cap Protein FliD and Its Implication in Filament Assembly.
J. Mol. Biol., 429, 2017

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