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3WOI
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BU of 3woi by Molmil
Crystal structure of the DAP BII (S657A)
分子名称: GLYCEROL, ZINC ION, dipeptidyl aminopeptidase BII
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2013-12-29
公開日2014-09-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献S46 peptidases are the first exopeptidases to be members of clan PA
SCI REP, 4, 2014
3WOO
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BU of 3woo by Molmil
Crystal structure of the DAP BII hexapeptide complex I
分子名称: Angiotensin II, GLYCEROL, ZINC ION, ...
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2013-12-29
公開日2014-09-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献S46 peptidases are the first exopeptidases to be members of clan PA
SCI REP, 4, 2014
3WOJ
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BU of 3woj by Molmil
Crystal structure of the DAP BII
分子名称: GLYCEROL, ZINC ION, dipeptidyl aminopeptidase BII
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2013-12-29
公開日2014-09-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献S46 peptidases are the first exopeptidases to be members of clan PA
SCI REP, 4, 2014
3WOK
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BU of 3wok by Molmil
Crystal structure of the DAP BII (Space)
分子名称: GLYCEROL, ZINC ION, dipeptidyl aminopeptidase BII
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2013-12-29
公開日2014-09-03
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献S46 peptidases are the first exopeptidases to be members of clan PA
SCI REP, 4, 2014
3WOP
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BU of 3wop by Molmil
Crystal structure of the DAP BII hexapeptide complex II
分子名称: Angiotensin IV, GLYCEROL, ZINC ION, ...
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2013-12-29
公開日2014-09-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献S46 peptidases are the first exopeptidases to be members of clan PA
SCI REP, 4, 2014
3WOQ
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BU of 3woq by Molmil
Crystal structure of the DAP BII hexapeptide complex III
分子名称: Angiotensin IV, GLYCEROL, ZINC ION, ...
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2013-12-29
公開日2014-09-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献S46 peptidases are the first exopeptidases to be members of clan PA
SCI REP, 4, 2014
3WOR
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BU of 3wor by Molmil
Crystal structure of the DAP BII octapeptide complex
分子名称: Angiotensin II, GLYCEROL, ZINC ION, ...
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2013-12-29
公開日2014-09-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献S46 peptidases are the first exopeptidases to be members of clan PA
SCI REP, 4, 2014
3WOM
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BU of 3wom by Molmil
Crystal structure of the DAP BII dipeptide complex II
分子名称: GLYCEROL, TYROSINE, VALINE, ...
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2013-12-29
公開日2014-09-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献S46 peptidases are the first exopeptidases to be members of clan PA
SCI REP, 4, 2014
3VP9
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BU of 3vp9 by Molmil
Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p mutant
分子名称: 1,4-DIETHYLENE DIOXIDE, General transcriptional corepressor TUP1
著者Matsumura, H, Kusaka, N, Nakamura, T, Tanaka, N, Sagegami, K, Uegaki, K, Inoue, T, Mukai, Y.
登録日2012-02-28
公開日2012-06-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.799 Å)
主引用文献Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p and its functional implications
J.Biol.Chem., 287, 2012
3VP8
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BU of 3vp8 by Molmil
Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p
分子名称: General transcriptional corepressor TUP1
著者Matsumura, H, Kusaka, N, Nakamura, T, Tanaka, N, Sagegami, K, Uegaki, K, Inoue, T, Mukai, Y.
登録日2012-02-28
公開日2012-06-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p and its functional implications
J.Biol.Chem., 287, 2012
2DLC
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BU of 2dlc by Molmil
Crystal structure of the ternary complex of yeast tyrosyl-tRNA synthetase
分子名称: MAGNESIUM ION, O-(ADENOSINE-5'-O-YL)-N-(L-TYROSYL)PHOSPHORAMIDATE, T-RNA (76-MER), ...
著者Tsunoda, M, Kusakabe, Y, Tanaka, N, Nakamura, K.T.
登録日2006-04-18
公開日2007-06-12
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for recognition of cognate tRNA by tyrosyl-tRNA synthetase from three kingdoms.
Nucleic Acids Res., 35, 2007
3AUA
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BU of 3aua by Molmil
Crystal structure of the quaternary complex-2 of an isomerase
分子名称: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, 3-[ethanoyl(hydroxy)amino]propylphosphonic acid, CALCIUM ION, ...
著者Umeda, T, Tanaka, N, Kusakabe, Y, Nakanishi, M, Kitade, Y, Nakamura, K.T.
登録日2011-02-01
公開日2011-08-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Molecular basis of fosmidomycin's action on the human malaria parasite Plasmodium falciparum
Sci Rep, 1, 2011
3AU8
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BU of 3au8 by Molmil
Crystal structure of the ternary complex of an isomerase
分子名称: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, MANGANESE (II) ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Umeda, T, Tanaka, N, Kusakabe, Y, Nakanishi, M, Kitade, Y, Nakamura, K.T.
登録日2011-02-01
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Molecular basis of fosmidomycin's action on the human malaria parasite Plasmodium falciparum
Sci Rep, 1, 2011
3AU9
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BU of 3au9 by Molmil
Crystal structure of the quaternary complex-1 of an isomerase
分子名称: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, 3-[FORMYL(HYDROXY)AMINO]PROPYLPHOSPHONIC ACID, CALCIUM ION, ...
著者Umeda, T, Tanaka, N, Kusakabe, Y, Nakanishi, M, Kitade, Y, Nakamura, K.T.
登録日2011-02-01
公開日2011-08-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular basis of fosmidomycin's action on the human malaria parasite Plasmodium falciparum
Sci Rep, 1, 2011
3ANX
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BU of 3anx by Molmil
Crystal structure of triamine/agmatine aminopropyltransferase (SPEE) from thermus thermophilus, complexed with MTA
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, spermidine synthase
著者Ganbe, T, Ohnuma, M, Sato, T, Tanaka, N, Oshima, T, Kumasaka, T.
登録日2010-09-14
公開日2011-04-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures and enzymatic properties of a triamine/agmatine aminopropyltransferase from Thermus thermophilus
J.Mol.Biol., 408, 2011
2D2X
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BU of 2d2x by Molmil
Crystal structure of 2-deoxy-scyllo-inosose synthase
分子名称: 2-deoxy-scyllo-inosose synthase, COBALT (II) ION, GLYCEROL, ...
著者Nango, E, Kumasaka, T, Tanaka, N, Kakinuma, K, Eguchi, T.
登録日2005-09-20
公開日2006-10-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of 2-deoxy-scyllo-inosose synthase, a key enzyme in the biosynthesis of 2-deoxystreptamine-containing aminoglycoside antibiotics, in complex with a mechanism-based inhibitor and NAD+
Proteins, 70, 2008
2DCJ
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BU of 2dcj by Molmil
A two-domain structure of alkaliphilic XynJ from Bacillus sp. 41M-1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, GLYCEROL, ...
著者Ihsanawati, Tanaka, N, Nakamura, S, Kumasaka, T.
登録日2006-01-07
公開日2007-03-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献A two-domain structure of alkaliphilic XynJ from Bacillus sp. 41M-1
To be Published
2DCK
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BU of 2dck by Molmil
A tetragonal-lattice structure of alkaliphilic XynJ from Bacillus sp. 41M-1
分子名称: CALCIUM ION, GLYCEROL, xylanase J
著者Fibriansah, G, Ihsanawati, Tanaka, N, Nakamura, S, Kumasaka, T.
登録日2006-01-07
公開日2007-03-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A two-domain structure of alkaliphilic XynJ from Bacillus sp. 41M-1
To be Published
3WA6
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BU of 3wa6 by Molmil
Crystal structure of tannase from Lactobacillus plantarum in the orthorhombic crystal
分子名称: SULFATE ION, tannase
著者Matoba, Y, Tanaka, N, Sugiyama, M.
登録日2013-04-27
公開日2013-07-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic and mutational analyses of tannase from Lactobacillus plantarum
Proteins, 81, 2013
3WA7
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BU of 3wa7 by Molmil
Crystal structure of selenomethionine-labeled tannase from Lactobacillus plantarum in the orthorhombic crystal
分子名称: ACETATE ION, GLYCEROL, SULFATE ION, ...
著者Matoba, Y, Tanaka, N, Sugiyama, M.
登録日2013-04-27
公開日2013-07-24
最終更新日2013-11-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallographic and mutational analyses of tannase from Lactobacillus plantarum.
Proteins, 81, 2013
2FR6
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BU of 2fr6 by Molmil
Crystal Structure of Mouse Cytidine Deaminase Complexed with Cytidine
分子名称: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, AMMONIA, Cytidine deaminase, ...
著者Teh, A.H.
登録日2006-01-19
公開日2006-07-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献The 1.48 A Resolution Crystal Structure of the Homotetrameric Cytidine Deaminase from Mouse
Biochemistry, 45, 2006
2FR5
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BU of 2fr5 by Molmil
Crystal Structure of Mouse Cytidine Deaminase Complexed with Tetrahydrouridine
分子名称: Cytidine deaminase, SULFATE ION, TETRAHYDROURIDINE, ...
著者Teh, A.H.
登録日2006-01-19
公開日2006-07-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献The 1.48 A Resolution Crystal Structure of the Homotetrameric Cytidine Deaminase from Mouse
Biochemistry, 45, 2006
4FXC
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BU of 4fxc by Molmil
TERTIARY STRUCTURE OF [2FE-2S] FERREDOXIN FROM SPIRULINA PLATENSIS REFINED AT 2.5 ANGSTROMS RESOLUTION: STRUCTURAL COMPARISONS OF PLANT-TYPE FERREDOXINS AND AN ELECTROSTATIC POTENTIAL ANALYSIS
分子名称: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN
著者Fukuyama, K, Tsukihara, T.
登録日1995-04-25
公開日1995-12-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Tertiary structure of [2Fe-2S] ferredoxin from Spirulina platensis refined at 2.5 A resolution: structural comparisons of plant-type ferredoxins and an electrostatic potential analysis.
J.Biochem.(Tokyo), 117, 1995
2GRU
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BU of 2gru by Molmil
Crystal structure of 2-deoxy-scyllo-inosose synthase complexed with carbaglucose-6-phosphate, NAD+ and Co2+
分子名称: (1R,2S,3S,4R)-5-METHYLENECYCLOHEXANE-1,2,3,4-TETRAOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-deoxy-scyllo-inosose synthase, ...
著者Nango, E, Kumasaka, T.
登録日2006-04-25
公開日2007-05-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure of 2-deoxy-scyllo-inosose synthase, a key enzyme in the biosynthesis of 2-deoxystreptamine-containing aminoglycoside antibiotics, in complex with a mechanism-based inhibitor and NAD+
Proteins, 70, 2008
4K1O
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BU of 4k1o by Molmil
Crystal structure of the alphaN-catenin actin-binding domain
分子名称: Catenin alpha-2, SULFATE ION
著者Ishiyama, N, Ikura, M.
登録日2013-04-05
公開日2013-05-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.603 Å)
主引用文献An autoinhibited structure of alpha-catenin and its implications for vinculin recruitment to adherens junctions.
J.Biol.Chem., 288, 2013

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