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3VL8
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BU of 3vl8 by Molmil
Crystal structure of XEG
分子名称: SULFATE ION, Xyloglucan-specific endo-beta-1,4-glucanase A
著者Yoshizawa, T, Shimizu, T, Hirano, H, Sato, M, Hashimoto, H.
登録日2011-11-30
公開日2012-04-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for inhibition of xyloglucan-specific endo-beta-1,4-glucanase (XEG) by XEG-protein inhibitor
J.Biol.Chem., 287, 2012
2Z5M
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BU of 2z5m by Molmil
Complex of Transportin 1 with TAP NLS, crystal form 2
分子名称: Nuclear RNA export factor 1, Transportin-1
著者Imasaki, T, Shimizu, T, Hashimoto, H, Hidaka, Y, Kose, S, Imamoto, N, Yamada, M, Sato, M.
登録日2007-07-14
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for substrate recognition and dissociation by human transportin 1
Mol.Cell, 28, 2007
3VIQ
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BU of 3viq by Molmil
Crystal structure of Swi5-Sfr1 complex from fission yeast
分子名称: GLYCEROL, Mating-type switching protein swi5, NITRATE ION, ...
著者Kuwabara, N, Murayama, Y, Hashimoto, H, Kokabu, Y, Ikeguchi, M, Sato, M, Mayanagi, K, Tsutsui, Y, Iwasaki, H, Shimizu, T.
登録日2011-10-06
公開日2012-08-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanistic insights into the activation of Rad51-mediated strand exchange from the structure of a recombination activator, the Swi5-Sfr1 complex
Structure, 20, 2012
3B0Q
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BU of 3b0q by Molmil
Human PPAR gamma ligand binding domain in complex with MCC555
分子名称: (5S)-5-({6-[(2-fluorobenzyl)oxy]naphthalen-2-yl}methyl)-1,3-thiazolidine-2,4-dione, Peroxisome proliferator-activated receptor gamma
著者Tomioka, D, Hashimoto, H, Sato, M, Shimizu, T.
登録日2011-06-13
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of human PPAR gamma in complex with MCC555
To be Published
2Z5O
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BU of 2z5o by Molmil
Complex of Transportin 1 with JKTBP NLS
分子名称: Heterogeneous nuclear ribonucleoprotein D-like, Transportin-1
著者Imasaki, T, Shimizu, T, Hashimoto, H, Hidaka, Y, Kose, S, Imamoto, N, Yamada, M, Sato, M.
登録日2007-07-14
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for substrate recognition and dissociation by human transportin 1
Mol.Cell, 28, 2007
2Z5K
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BU of 2z5k by Molmil
Complex of Transportin 1 with TAP NLS
分子名称: Nuclear RNA export factor 1, PHOSPHATE ION, Transportin-1
著者Imasaki, T, Shimizu, T, Hashimoto, H, Hidaka, Y, Yamada, M, Kose, S, Imamoto, N, Sato, M.
登録日2007-07-14
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for substrate recognition and dissociation by human transportin 1
Mol.Cell, 28, 2007
3A8R
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BU of 3a8r by Molmil
The structure of the N-terminal regulatory domain of a plant NADPH oxidase
分子名称: CALCIUM ION, Putative uncharacterized protein
著者Oda, T, Hashimoto, H, Kuwabara, N, Akashi, S, Hayashi, K, Kojima, C, Wong, H.L, Kawasaki, T, Shimamoto, K, Sato, M, Shimizu, T.
登録日2009-10-07
公開日2009-10-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structure of the N-terminal regulatory domain of a plant NADPH oxidase and its functional implications
J.Biol.Chem., 285, 2010
3ABE
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BU of 3abe by Molmil
Structure of human REV7 in complex with a human REV3 fragment in a tetragonal crystal
分子名称: DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B
著者Hara, K, Hashimoto, H, Murakumo, Y, Kobayashi, S, Kogame, T, Unzai, S, Akashi, S, Takeda, S, Shimizu, T, Sato, M.
登録日2009-12-07
公開日2010-02-16
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of human REV7 in complex with a human REV3 fragment and structural implication of the interaction between DNA polymerase {zeta} and REV1
J.Biol.Chem., 285, 2010
3VL9
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BU of 3vl9 by Molmil
Crystal structure of xeg-xyloglucan
分子名称: Xyloglucan-specific endo-beta-1,4-glucanase A, beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Yoshizawa, T, Shimizu, T, Hirano, H, Sato, M, Hashimoto, H.
登録日2011-11-30
公開日2012-04-18
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural basis for inhibition of xyloglucan-specific endo-beta-1,4-glucanase (XEG) by XEG-protein inhibitor
J.Biol.Chem., 287, 2012
3B1T
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BU of 3b1t by Molmil
Crystal structure of human peptidylarginine deiminase 4 in complex with o-Cl-amidine
分子名称: 2-{[(2S)-1-amino-5-{[(1Z)-2-chloroethanimidoyl]amino}-1-oxopentan-2-yl]carbamoyl}benzoic acid, CALCIUM ION, Protein-arginine deiminase type-4, ...
著者Causey, C.P, Jones, J.E, Slack, J.L, Kamei, D, Jones Jr, L.E, Subramanian, V, Knuckley, B, Ebrahimi, P, Chumanevich, A.A, Luo, Y, Hashimoto, H, Shimizu, T, Sato, M, Hofseth, L.J, Thompson, P.R.
登録日2011-07-13
公開日2011-10-26
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Development of N-alpha-(2-Carboxyl)benzoyl-N(5)-(2-fluoro-1-iminoethyl)-l-ornithine Amide (o-F-amidine) and N-alpha-(2-Carboxyl)benzoyl-N(5)-(2-chloro-1-iminoethyl)-l-ornithine Amide (o-Cl-amidine) As Second Generation Protein Arginine Deiminase (PAD) Inhibitors
J.Med.Chem., 54, 2011
3VLA
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BU of 3vla by Molmil
Crystal structure of edgp
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, EDGP
著者Yoshizawa, T, Shimizu, T, Hirano, H, Sato, M, Hashimoto, H.
登録日2011-11-30
公開日2012-04-18
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Structural basis for inhibition of xyloglucan-specific endo-beta-1,4-glucanase (XEG) by XEG-protein inhibitor
J.Biol.Chem., 287, 2012
3VLB
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BU of 3vlb by Molmil
Crystal structure of xeg-edgp
分子名称: EDGP, Xyloglucan-specific endo-beta-1,4-glucanase A
著者Yoshizawa, T, Shimizu, T, Hirano, H, Sato, M, Hashimoto, H.
登録日2011-11-30
公開日2012-04-18
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for inhibition of xyloglucan-specific endo-beta-1,4-glucanase (XEG) by XEG-protein inhibitor
J.Biol.Chem., 287, 2012
2Z5N
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BU of 2z5n by Molmil
Complex of Transportin 1 with hnRNP D NLS
分子名称: Heterogeneous nuclear ribonucleoprotein D0, Transportin-1
著者Imasaki, T, Shimizu, T, Hashimoto, H, Hidaka, Y, Kose, S, Imamoto, N, Yamada, M, Sato, M.
登録日2007-07-14
公開日2007-10-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for substrate recognition and dissociation by human transportin 1
Mol.Cell, 28, 2007
2Z5J
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BU of 2z5j by Molmil
Free Transportin 1
分子名称: Transportin-1
著者Imasaki, T, Shimizu, T, Hashimoto, H, Hidaka, Y, Yamada, M, Sato, M.
登録日2007-07-13
公開日2007-10-23
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural basis for substrate recognition and dissociation by human transportin 1
Mol.Cell, 28, 2007
3VU7
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BU of 3vu7 by Molmil
Crystal structure of REV1-REV7-REV3 ternary complex
分子名称: DNA polymerase zeta catalytic subunit, DNA repair protein REV1, Mitotic spindle assembly checkpoint protein MAD2B
著者Kikuchi, S, Hara, K, Shimizu, T, Sato, M, Hashimoto, H.
登録日2012-06-20
公開日2012-08-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of recruitment of DNA polymerase [zeta] by interaction between REV1 and REV7 proteins
J.Biol.Chem., 287, 2012
5UND
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BU of 5und by Molmil
Crystal Structure of CTCF(ZnF 4-10) With 28-mer DNA
分子名称: 1,2-ETHANEDIOL, DNA (26-MER), GLYCEROL, ...
著者Horton, J.R, Cheng, X.
登録日2017-01-30
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.549 Å)
主引用文献Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA.
Mol. Cell, 66, 2017
6S58
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BU of 6s58 by Molmil
AvaII restriction endonuclease in the absence of nucleic acids
分子名称: CALCIUM ION, Type II site-specific deoxyribonuclease, UNKNOWN ATOM OR ION
著者Kisiala, M, Kowalska, M, Korza, H, Czapinska, H, Bochtler, M.
登録日2019-06-30
公開日2020-05-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Restriction endonucleases that cleave RNA/DNA heteroduplexes bind dsDNA in A-like conformation.
Nucleic Acids Res., 48, 2020
6S48
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BU of 6s48 by Molmil
AvaII RESTRICTION ENDONUCLEASE IN COMPLEX WITH PARTIALLY CLEAVED dsDNA
分子名称: BETA-MERCAPTOETHANOL, CALCIUM ION, DNA (5'-D(*GP*AP*TP*G)-3'), ...
著者Kisiala, M, Kowalska, M, Korza, H, Czapinska, H, Bochtler, M.
登録日2019-06-26
公開日2020-05-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Restriction endonucleases that cleave RNA/DNA heteroduplexes bind dsDNA in A-like conformation.
Nucleic Acids Res., 48, 2020
6KCS
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BU of 6kcs by Molmil
Crystal structure of HIRAN domain of HLTF in complex with duplex DNA
分子名称: DNA (5'-D(*AP*CP*TP*GP*TP*AP*CP*GP*TP*AP*CP*AP*GP*T)-3'), Helicase-like transcription factor
著者Hishiki, A, Hashimoto, A.
登録日2019-06-28
公開日2020-06-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of HIRAN domain of human HLTF bound to duplex DNA provides structural basis for DNA unwinding to initiate replication fork regression.
J.Biochem., 167, 2020
1UGN
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BU of 1ugn by Molmil
Crystal structure of LIR1.02, one of the alleles of LIR1
分子名称: Leukocyte immunoglobulin-like receptor 1
著者Shiroishi, M, Rasubala, L, Kuroki, K, Amano, K, Tsuchiya, N, Tokunaga, K, Kohda, D, Maenaka, K.
登録日2003-06-17
公開日2004-08-10
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Extensive polymorphisms of LILRB1 (ILT2, LIR1) and their association with HLA-DRB1 shared epitope negative rheumatoid arthritis.
Hum.Mol.Genet., 14, 2005
6M4B
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BU of 6m4b by Molmil
1510-N membrane-bound stomatin-specific protease S97A mutant
分子名称: Membrane-bound protease PH1510, SULFATE ION
著者Yokoyama, H, Suzuki, K.
登録日2020-03-06
公開日2020-06-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Inactive dimeric structure of the protease domain of stomatin operon partner protein.
Acta Crystallogr.,Sect.D, 76, 2020
4M9E
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BU of 4m9e by Molmil
Structure of Klf4 zinc finger DNA binding domain in complex with methylated DNA
分子名称: ACETATE ION, DNA (5'-D(*GP*AP*GP*GP*(5CM)P*GP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*AP*(5CM)P*GP*CP*CP*TP*C)-3'), ...
著者Liu, Y, Olanrewaju, Y.O, Blumenthal, R.M, Zhang, X, Cheng, X.
登録日2013-08-14
公開日2014-02-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.851 Å)
主引用文献Structural basis for Klf4 recognition of methylated DNA.
Nucleic Acids Res., 42, 2014
5AYG
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BU of 5ayg by Molmil
Crystal Structure of the Human ROR gamma Ligand Binding Domain With 3g
分子名称: 3-[5-(2-cyclohexylethyl)-4-ethyl-1,2,4-triazol-3-yl]-N-naphthalen-1-yl-propanamide, Nuclear receptor ROR-gamma
著者Noguchi, M, Doi, S, Nomura, A, Kikuwaka, M, Murase, K, Hirata, K, Kamada, M, Adachi, T.
登録日2015-08-20
公開日2016-03-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献SAR Exploration Guided by LE and Fsp(3): Discovery of a Selective and Orally Efficacious ROR gamma Inhibitor
Acs Med.Chem.Lett., 7, 2016
6G3B
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BU of 6g3b by Molmil
AvaII restriction endonuclease in complex with an RNA/DNA hybrid
分子名称: DNA (5'-D(*CP*CP*AP*TP*GP*GP*TP*CP*CP*TP*A)-3'), RNA (5'-R(P*GP*UP*AP*GP*GP*AP*CP*CP*AP*UP*G)-3'), Type II site-specific deoxyribonuclease
著者Kisiala, M, Kowalska, M, Czapinska, H, Bochtler, M.
登録日2018-03-24
公開日2019-04-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Restriction endonucleases that cleave RNA/DNA heteroduplexes bind dsDNA in A-like conformation
Nucleic Acids Res., 2020
1RGN
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BU of 1rgn by Molmil
Structure of the reaction centre from Rhodobacter sphaeroides carotenoidless strain R-26.1 reconstituted with spheroidene
分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
著者Roszak, A.W, Frank, H.A, McKendrick, K, Mitchell, I.A, Cogdell, R.J, Isaacs, N.W.
登録日2003-11-12
公開日2004-04-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Protein Regulation of Carotenoid Binding: Gatekeeper and Locking Amino Acid Residues in Reaction Centers of Rhodobacter sphaeroides
STRUCTURE, 12, 2004

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件を2025-07-09に公開中

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