Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4DK2
DownloadVisualize
BU of 4dk2 by Molmil
Crystal Structure of Open Trypanosoma brucei dUTPase
分子名称: Deoxyuridine triphosphatase
著者Hemsworth, G.R, Gonzalez-Pacanowska, D, Wilson, K.S.
登録日2012-02-03
公開日2013-08-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献On the catalytic mechanism of dimeric dUTPases.
Biochem.J., 456, 2013
4DL8
DownloadVisualize
BU of 4dl8 by Molmil
Crystal structure of Trypanosoma brucei dUTPase with dUMP, planar [AlF3-OPO3] transition state analogue, Mg2+, and Na+
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, ALUMINUM FLUORIDE, Deoxyuridine triphosphatase, ...
著者Hemsworth, G.R, Gonzalez-Pacanowska, D, Wilson, K.S.
登録日2012-02-06
公開日2013-08-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献On the catalytic mechanism of dimeric dUTPases.
Biochem.J., 456, 2013
6Y5S
DownloadVisualize
BU of 6y5s by Molmil
Crystal structure of savinase at cryogenic conditions
分子名称: CALCIUM ION, SODIUM ION, Subtilisin Savinase
著者Wu, S, Moroz, O, Turkenburg, J, Nielsen, J.E, Wilson, K.S, Teilum, K.
登録日2020-02-25
公開日2020-06-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Conformational heterogeneity of Savinase from NMR, HDX-MS and X-ray diffraction analysis.
Peerj, 8, 2020
4DLC
DownloadVisualize
BU of 4dlc by Molmil
Crystal Structure of Trypanosoma brucei dUTPase with dUMP, MgF3- transition state analogue, and Mg2+
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Deoxyuridine triphosphatase, MAGNESIUM ION, ...
著者Hemsworth, G.R, Gonzalez-Pacanowska, D, Wilson, K.S.
登録日2012-02-06
公開日2013-08-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.759 Å)
主引用文献On the catalytic mechanism of dimeric dUTPases.
Biochem.J., 456, 2013
4CG0
DownloadVisualize
BU of 4cg0 by Molmil
Savinase crystal structures for combined single crystal diffraction and powder diffraction analysis
分子名称: CALCIUM ION, SODIUM ION, SUBTILISIN SAVINASE
著者Frankaer, C.G, Moroz, O.V, Turkenburg, J.P, Aspmo, S.I, Thymark, M, Friis, E.P, Stahla, K, Nielsen, J.E, Wilson, K.S, Harris, P.
登録日2013-11-19
公開日2014-04-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Analysis of an Industrial Production Suspension of Bacillus Lentus Subtilisin Crystals by Powder Diffraction: A Powerful Quality-Control Tool.
Acta Crystallogr.,Sect.D, 70, 2014
2JEM
DownloadVisualize
BU of 2jem by Molmil
Native family 12 xyloglucanase from Bacillus licheniformis
分子名称: ENDO-BETA-1,4-GLUCANASE
著者Gloster, T.M, Ibatullin, F.M, Macauley, K, Eklof, J.M, Roberts, S, Turkenburg, J.P, Bjornvad, M.E, Jorgensen, P.L, Danielsen, S, Johansen, K.S, Borchert, T.V, Wilson, K.S, Brumer, H, Davies, G.J.
登録日2007-01-18
公開日2007-03-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Characterization and Three-Dimensional Structures of Two Distinct Bacterial Xyloglucanases from Families Gh5 and Gh12.
J.Biol.Chem., 282, 2007
5FUV
DownloadVisualize
BU of 5fuv by Molmil
catalytic domain of Thymidine kinase from Trypanosoma brucei with dThd
分子名称: GLYCEROL, PHOSPHATE ION, THYMDINE KINASE, ...
著者Timm, J, Valente, M, Castillo-Acosta, V, Balzarini, T, Nettleship, J.E, Rada, H, Wilson, K.S, Gonzalez-Pacanowska, D.
登録日2016-01-31
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Cell Cycle Regulation and Novel Structural Features of Thymidine Kinase, an Essential Enzyme in Trypanosoma Brucei.
Mol.Microbiol., 102, 2016
5FYP
DownloadVisualize
BU of 5fyp by Molmil
Calcium-dependent phosphoinositol-specific phospholipase C from a Gram-negative bacterium, Pseudomonas sp, apo form, crystal form 2
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, PHOSPHOINOSITOL-SPECIFIC PHOSPHOLIPASE C, ...
著者Moroz, O.V, Blagova, E, Lebedev, A.A, Norgaard, A, Segura, D.R, Blicher, T.H, Wilson, K.S.
登録日2016-03-09
公開日2017-01-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献The structure of a calcium-dependent phosphoinositide-specific phospholipase C from Pseudomonas sp. 62186, the first from a Gram-negative bacterium.
Acta Crystallogr D Struct Biol, 73, 2017
5FUX
DownloadVisualize
BU of 5fux by Molmil
catalytic domain of Thymidine kinase from Trypanosoma brucei with dTMP
分子名称: MAGNESIUM ION, PHOSPHATE ION, THYMDINE KINASE, ...
著者Timm, J, Valente, M, Castillo-Acosta, V, Balzarini, T, Nettleship, J.E, Rada, H, Wilson, K.S, Gonzalez-Pacanowska, D.
登録日2016-01-31
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Cell Cycle Regulation and Novel Structural Features of Thymidine Kinase, an Essential Enzyme in Trypanosoma Brucei.
Mol.Microbiol., 102, 2016
5FYR
DownloadVisualize
BU of 5fyr by Molmil
Calcium-dependent phosphoinositol-specific phospholipase C from a Gram-negative bacterium, Pseudomonas sp, apo form, myoinositol complex
分子名称: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, CALCIUM ION, PHOSPHATE ION, ...
著者Moroz, O.V, Blagova, E, Lebedev, A.A, Norgaard, A, Segura, D.R, Blicher, T.H, Wilson, K.S.
登録日2016-03-09
公開日2017-01-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The structure of a calcium-dependent phosphoinositide-specific phospholipase C from Pseudomonas sp. 62186, the first from a Gram-negative bacterium.
Acta Crystallogr D Struct Biol, 73, 2017
5FYO
DownloadVisualize
BU of 5fyo by Molmil
Calcium-dependent phosphoinositol-specific phospholipase C from a Gram-negative bacterium, Pseudomonas sp, apo form, crystal form 1
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, PHOSPHOINOSITOL-SPECIFIC PHOSPHOLIPASE C
著者Moroz, O.V, Blagova, E, Lebedev, A.A, Norgaard, A, Segura, D.R, Blicher, T.H, Wilson, K.S.
登録日2016-03-08
公開日2017-01-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structure of a calcium-dependent phosphoinositide-specific phospholipase C from Pseudomonas sp. 62186, the first from a Gram-negative bacterium.
Acta Crystallogr D Struct Biol, 73, 2017
5FUW
DownloadVisualize
BU of 5fuw by Molmil
catalytic domain of Thymidine kinase from Trypanosoma brucei with dTMP or dThd
分子名称: PHOSPHATE ION, THYMDINE KINASE, THYMIDINE, ...
著者Timm, J, Valente, M, Castillo-Acosta, V, Balzarini, T, Nettleship, J.E, Rada, H, Wilson, K.S, Gonzalez-Pacanowska, D.
登録日2016-01-31
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Cell Cycle Regulation and Novel Structural Features of Thymidine Kinase, an Essential Enzyme in Trypanosoma Brucei.
Mol.Microbiol., 102, 2016
2YOH
DownloadVisualize
BU of 2yoh by Molmil
Plasmodium falciparum thymidylate kinase in complex with a urea-alpha- deoxythymidine inhibitor
分子名称: 1-[[(2R,3S,5S)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl]-3-(4-nitrophenyl)urea, THYMIDYLATE KINASE
著者Huaqing, C, Carrero-Lerida, J, Silva, A.P.G, Whittingham, J.L, Brannigan, J.A, Ruiz-Perez, L.M, Read, K.D, Wilson, K.S, Gonzalez-Pacanowska, D, Gilbert, I.H.
登録日2012-10-24
公開日2013-07-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Synthesis and Evaluation of Alpha-Thymidine Analogues as Novel Antimalarials.
J.Med.Chem., 55, 2012
2YKK
DownloadVisualize
BU of 2ykk by Molmil
Structure of a Paenibacillus Polymyxa Xyloglucanase from Glycoside Hydrolase Family 44
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CEL44C, ...
著者Ariza, A, Eklof, J.M, Spadiut, O, Offen, W.A, Roberts, S.M, Besenmatter, W, Friis, E.P, Skjot, M, Wilson, K.S, Brumer, H, Davies, G.
登録日2011-05-27
公開日2011-06-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structure and Activity of Paenibacillus Polymyxa Xyloglucanase from Glycoside Hydrolase Family 44.
J.Biol.Chem., 286, 2011
5FUY
DownloadVisualize
BU of 5fuy by Molmil
catalytic domain of Thymidine kinase from Trypanosoma brucei with dTMP
分子名称: PHOSPHATE ION, THYMDINE KINASE, ZINC ION, ...
著者Timm, J, Valente, M, Castillo-Acosta, V, Balzarini, T, Nettleship, J.E, Rada, H, Wilson, K.S, Gonzalez-Pacanowska, D.
登録日2016-01-31
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Cell Cycle Regulation and Novel Structural Features of Thymidine Kinase, an Essential Enzyme in Trypanosoma Brucei.
Mol.Microbiol., 102, 2016
5FJI
DownloadVisualize
BU of 5fji by Molmil
Three-dimensional structures of two heavily N-glycosylated Aspergillus sp. Family GH3 beta-D-glucosidases
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-GLUCOSIDASE, ...
著者Agirre, J, Ariza, A, Offen, W.A, Turkenburg, J.P, Roberts, S.M, McNicholas, S, Harris, P.V, McBrayer, B, Dohnalek, J, Cowtan, K.D, Davies, G.J, Wilson, K.S.
登録日2015-10-09
公開日2016-02-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Three-Dimensional Structures of Two Heavily N-Glycosylated Aspergillus Sp. Family Gh3 Beta-D-Glucosidases
Acta Crystallogr.,Sect.D, 72, 2016
5FFN
DownloadVisualize
BU of 5ffn by Molmil
Complex of subtilase SubTY from Bacillus sp. TY145 with chymotrypsin inhibitor CI2A
分子名称: CALCIUM ION, Enzyme subtilase SubTY from Bacillus sp. TY145, SODIUM ION, ...
著者McAuley, K.E, Svendsen, A, Oestergaard, P.R, Dohnalek, J, Wilson, K.S.
登録日2015-12-18
公開日2016-05-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Stabilization of Enzymes by Metal Binding: Structures of Two Alkalophilic Bacillus Subtilases and Analysis of the Second Metal-Binding Site of the Subtilase Family
Book, 2016
5FAX
DownloadVisualize
BU of 5fax by Molmil
Structure of subtilase SubHal from Bacillus halmapalus
分子名称: CALCIUM ION, Subtilase SubHal from Bacillus halmapalus
著者Dohnalek, J, Brzozowski, A.M, Svendsen, A, Wilson, K.S.
登録日2015-12-12
公開日2016-05-18
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Stabilization of Enzymes by Metal Binding: Structures of Two Alkalophilic Bacillus Subtilases and Analysis of the Second Metal-Binding Site of the Subtilase Family
Book, 2016
2YAZ
DownloadVisualize
BU of 2yaz by Molmil
The Crystal Structure of Leishmania major dUTPase in complex dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DUTPASE, MAGNESIUM ION, ...
著者Hemsworth, G.R, Moroz, O.V, Fogg, M.J, Scott, B, Bosch-Navarrete, C, Gonzalez-Pacanowska, D, Wilson, K.S.
登録日2011-02-25
公開日2011-03-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Crystal Structure of the Leishmania Major Deoxyuridine Triphosphate Nucleotidohydrolase in Complex with Nucleotide Analogues, Dump, and Deoxyuridine.
J.Biol.Chem., 286, 2011
2YAY
DownloadVisualize
BU of 2yay by Molmil
The Crystal Structure of Leishmania major dUTPase in complex with substrate analogue dUpNpp
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, CALCIUM ION, DUTPASE
著者Hemsworth, G.R, Moroz, O.V, Fogg, M.J, Scott, B, Bosch-Navarrete, C, Gonzalez-Pacanowska, D, Wilson, K.S.
登録日2011-02-25
公開日2011-03-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献The Crystal Structure of the Leishmania Major Deoxyuridine Triphosphate Nucleotidohydrolase in Complex with Nucleotide Analogues, Dump, and Deoxyuridine.
J.Biol.Chem., 286, 2011
2YB0
DownloadVisualize
BU of 2yb0 by Molmil
The Crystal Structure of Leishmania major dUTPase in complex deoxyuridine
分子名称: 2'-DEOXYURIDINE, DUTPASE, SULFATE ION
著者Hemsworth, G.R, Moroz, O.V, Fogg, M.J, Scott, B, Bosch-Navarrete, C, Gonzalez-Pacanowska, D, Wilson, K.S.
登録日2011-02-25
公開日2011-03-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献The Crystal Structure of the Leishmania Major Deoxyuridine Triphosphate Nucleotidohydrolase in Complex with Nucleotide Analogues, Dump, and Deoxyuridine.
J.Biol.Chem., 286, 2011
2JEN
DownloadVisualize
BU of 2jen by Molmil
Family 12 xyloglucanase from Bacillus licheniformis in complex with ligand
分子名称: 1,4-DIETHYLENE DIOXIDE, ENDO-BETA-1,4-GLUCANASE, GLYCEROL, ...
著者Gloster, T.M, Ibatullin, F.M, Macauley, K, Eklof, J.M, Roberts, S, Turkenburg, J.P, Bjornvad, M.E, Jorgensen, P.L, Danielsen, S, Johansen, K.S, Borchert, T.V, Wilson, K.S, Brumer, H, Davies, G.J.
登録日2007-01-18
公開日2007-03-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Characterization and Three-Dimensional Structures of Two Distinct Bacterial Xyloglucanases from Families Gh5 and Gh12.
J.Biol.Chem., 282, 2007
5FBZ
DownloadVisualize
BU of 5fbz by Molmil
Structure of subtilase SubHal from Bacillus halmapalus - complex with chymotrypsin inhibitor CI2A
分子名称: Autoproteolytic fragment of enzyme subtilase SubHal, CALCIUM ION, Enzyme subtilase SubHal from Bacillus halmapalus, ...
著者Dohnalek, J, Brzozowski, A.M, Svendsen, A, Wilson, K.S.
登録日2015-12-14
公開日2016-05-18
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Stabilization of Enzymes by Metal Binding: Structures of Two Alkalophilic Bacillus Subtilases and Analysis of the Second Metal-Binding Site of the Subtilase Family
Book, 2016
5FJJ
DownloadVisualize
BU of 5fjj by Molmil
Three-dimensional structures of two heavily N-glycosylated Aspergillus sp. Family GH3 beta-D-glucosidases
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-GLUCOSIDASE, ...
著者Agirre, J, Ariza, A, Offen, W.A, Turkenburg, J.P, Roberts, S.M, McNicholas, S, Harris, P.V, McBrayer, B, Dohnalek, J, Cowtan, K.D, Davies, G.J, Wilson, K.S.
登録日2015-10-09
公開日2016-02-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Three-Dimensional Structures of Two Heavily N-Glycosylated Aspergillus Sp. Family Gh3 Beta-D-Glucosidases
Acta Crystallogr.,Sect.D, 72, 2016
3UBP
DownloadVisualize
BU of 3ubp by Molmil
DIAMIDOPHOSPHATE INHIBITED BACILLUS PASTEURII UREASE
分子名称: DIAMIDOPHOSPHATE, NICKEL (II) ION, PROTEIN (UREASE ALPHA SUBUNIT), ...
著者Benini, S, Rypniewski, W.R, Wilson, K.S, Miletti, S, Mangani, S, Ciurli, S.
登録日1998-12-16
公開日1999-12-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A new proposal for urease mechanism based on the crystal structures of the native and inhibited enzyme from Bacillus pasteurii: why urea hydrolysis costs two nickels.
Structure Fold.Des., 7, 1999

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon