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3EYI
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BU of 3eyi by Molmil
The crystal structure of the second Z-DNA binding domain of human DAI (ZBP1) in complex with Z-DNA
分子名称: 5'-TCGCGCG-3', Z-DNA-binding protein 1
著者Ha, S.C, Kim, K.K.
登録日2008-10-21
公開日2009-01-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The crystal structure of the second Z-DNA binding domain of human DAI (ZBP1) in complex with Z-DNA reveals an unusual binding mode to Z-DNA.
Proc.Natl.Acad.Sci.USA, 105, 2008
3F23
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BU of 3f23 by Molmil
Crystal structure of Zalpha in complex with d(CGGCCG)
分子名称: DNA (5'-D(*DTP*DCP*DGP*DGP*DCP*DCP*DG)-3'), Double-stranded RNA-specific adenosine deaminase
著者Ha, S.C, Choi, J, Kim, K.K.
登録日2008-10-28
公開日2008-12-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1
Nucleic Acids Res., 37, 2009
1LAP
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BU of 1lap by Molmil
MOLECULAR STRUCTURE OF LEUCINE AMINOPEPTIDASE AT 2.7-ANGSTROMS RESOLUTION
分子名称: Cytosol aminopeptidase, ZINC ION
著者Burley, S.K, David, P.R, Taylor, A, Lipscomb, W.N.
登録日1990-08-01
公開日1991-10-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular structure of leucine aminopeptidase at 2.7-A resolution.
Proc.Natl.Acad.Sci.USA, 87, 1990
482D
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BU of 482d by Molmil
RELEASE OF THE CYANO MOIETY IN THE CRYSTAL STRUCTURE OF N-CYANOMETHYL-N-(2-METHOXYETHYL)-DAUNOMYCIN COMPLEXED WITH D(CGATCG)
分子名称: 5'-D(*CP*GP*AP*TP*CP*G)-3', N-HYDROXYMETHYL-N-(2-METHOXYETHYL)-DAUNOMYCIN
著者Saminadin, P, Dautant, A, Mondon, M, Langlois D'Estaintot, B, Courseille, C, Precigoux, G.
登録日1999-07-27
公開日1999-09-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Release of the cyano moiety in the crystal structure of N-cyanomethyl-N-(2-methoxyethyl)-daunomycin complexed with d(CGATCG).
Eur.J.Biochem., 267, 2000
3F21
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BU of 3f21 by Molmil
Crystal structure of Zalpha in complex with d(CACGTG)
分子名称: DNA (5'-D(*DTP*DCP*DAP*DCP*DGP*DTP*DG)-3'), Double-stranded RNA-specific adenosine deaminase
著者Ha, S.C, Choi, J, Kim, K.K.
登録日2008-10-28
公開日2008-12-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1
Nucleic Acids Res., 37, 2009
3F22
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BU of 3f22 by Molmil
Crystal structure of Zalpha in complex with d(CGTACG)
分子名称: DNA (5'-D(*DTP*DCP*DGP*DTP*DAP*DCP*DG)-3'), Double-stranded RNA-specific adenosine deaminase
著者Ha, S.C, Choi, J, Kim, K.K.
登録日2008-10-28
公開日2008-12-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1
Nucleic Acids Res., 37, 2009
6TNA
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BU of 6tna by Molmil
CRYSTAL STRUCTURE OF YEAST PHENYLALANINE T-RNA. I.CRYSTALLOGRAPHIC REFINEMENT
分子名称: MAGNESIUM ION, TRNAPHE
著者Sussman, J.L, Holbrook, S.R, Warrant, R.W, Church, G.M, Kim, S.-H.
登録日1978-11-16
公開日1979-01-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of yeast phenylalanine transfer RNA. I. Crystallographic refinement.
J.Mol.Biol., 123, 1978
4TRA
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BU of 4tra by Molmil
RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALS
分子名称: MAGNESIUM ION, TRNAPHE
著者Westhof, E, Dumas, P, Moras, D.
登録日1987-11-06
公開日1987-11-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Restrained refinement of two crystalline forms of yeast aspartic acid and phenylalanine transfer RNA crystals.
Acta Crystallogr.,Sect.A, 44, 1988
2F8W
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BU of 2f8w by Molmil
Crystal structure of d(CACGTG)2
分子名称: 1,3-DIAMINOPROPANE, 5'-D(*CP*AP*CP*GP*TP*G)-3', SPERMINE
著者Narayana, N, Shamala, N, Ganesh, K.N, Viswamitra, M.A.
登録日2005-12-04
公開日2006-01-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Interaction between the Z-Type DNA Duplex and 1,3-Propanediamine: Crystal Structure of d(CACGTG)2 at 1.2 A Resolution
Biochemistry, 45, 2006
1NAB
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BU of 1nab by Molmil
The crystal structure of the complex between a disaccharide anthracycline and the DNA hexamer d(CGATCG) reveals two different binding sites involving two DNA duplexes
分子名称: 5'-D(*CP*GP*AP*TP*CP*G)-3', 7-[5-(4-AMINO-5-HYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YLOXY)-4-HYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YLOXY]-6,9,11-TRIHYDROXY-9-(2-HYDROXY-ACETYL)-7,8,9,10-TETRAHYDRO-NAPHTHACENE-5,12-DIONE
著者Temperini, C, Messori, L, Orioli, P, Di Bugno, C, Animati, F, Ughetto, G.
登録日2002-11-27
公開日2003-02-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The crystal structure of the complex between a disaccharide anthracycline and the DNA hexamer d(CGATCG) reveals two different binding sites involving two DNA duplexes
Nucleic Acids Res., 31, 2003
263D
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BU of 263d by Molmil
ISOHELICITY AND PHASING IN DRUG-DNA SEQUENCE RECOGNITION: CRYSTAL STRUCTURE OF A TRIS(BENZIMIDAZOLE)-OLIGONUCLEOTIDE COMPLEX
分子名称: 2''-(4-METHOXYPHENYL)-5-(3-AMINO-1-PYRROLIDINYL)-2,5',2',5''-TRI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3')
著者Clark, G.R, Gray, E.J, Neidle, S, Li, Y.-H, Leupin, W.
登録日1996-09-27
公開日1996-10-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Isohelicity and phasing in drug--DNA sequence recognition: crystal structure of a tris(benzimidazole)--oligonucleotide complex.
Biochemistry, 35, 1996
187D
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BU of 187d by Molmil
HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION
分子名称: DNA (5'-D(*CP*CP*CP*CP*GP*GP*GP*G)-3')
著者Eisenstein, M, Shakked, Z.
登録日1994-09-02
公開日1995-02-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Hydration patterns and intermolecular interactions in A-DNA crystal structures. Implications for DNA recognition.
J.Mol.Biol., 248, 1995
189D
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BU of 189d by Molmil
HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION
分子名称: DNA (5'-D(*GP*GP*CP*CP*GP*GP*CP*C)-3')
著者Eisenstein, M, Shakked, Z.
登録日1994-09-02
公開日1995-02-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Hydration patterns and intermolecular interactions in A-DNA crystal structures. Implications for DNA recognition.
J.Mol.Biol., 248, 1995
2L4M
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BU of 2l4m by Molmil
Solution structure of the Zbeta domain of human DAI and its binding modes to B- and Z-DNA
分子名称: Uncharacterized protein
著者Kim, K, Khayrutdinov, B.I, Jeon, Y.H, Kim, K.K.
登録日2010-10-08
公開日2011-04-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the Zbeta domain of human DNA-dependent activator of IFN-regulatory factors and its binding modes to B- and Z-DNA
Proc.Natl.Acad.Sci.USA, 2011
1JES
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BU of 1jes by Molmil
Crystal Structure of a Copper-Mediated Base Pair in DNA
分子名称: 5'-D(*CP*GP*CP*GP*(DPY)P*AP*TP*(DRP)P*CP*GP*CP*G)-3', COPPER (II) ION
著者Atwell, S, Meggers, E, Spraggon, G, Schultz, P.G.
登録日2001-06-18
公開日2001-11-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a Copper-Mediated Base Pair in DNA
J.Am.Chem.Soc., 123, 2001
5I35
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BU of 5i35 by Molmil
Structure of the Human mitochondrial kinase COQ8A R611K with AMPPNP (Cerebellar Ataxia and Ubiquinone Deficiency Through Loss of Unorthodox Kinase Activity)
分子名称: Atypical kinase ADCK3, mitochondrial, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Bingman, C.A, Stefely, J.A, Pagliarini, D.J, Mitochondrial Protein Partnership (MPP)
登録日2016-02-09
公開日2016-08-17
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Cerebellar Ataxia and Coenzyme Q Deficiency through Loss of Unorthodox Kinase Activity.
Mol.Cell, 63, 2016
242D
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BU of 242d by Molmil
MAD PHASING STRATEGIES EXPLORED WITH A BROMINATED OLIGONUCLEOTIDE CRYSTAL AT 1.65 A RESOLUTION.
分子名称: DNA (5'-D(*CP*GP*CP*GP*(CBR)P*G)-3')
著者Peterson, M.R, Harrop, S.J, McSweeney, S.M, Leonard, G.A, Thompson, A.W, Hunter, W.N, Helliwell, J.R.
登録日1996-06-20
公開日1996-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献MAD Phasing Strategies Explored with a Brominated Oligonucleotide Crystal at 1.65A Resolution.
J.Synchrotron Radiat., 3, 1996
145D
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BU of 145d by Molmil
Structure and thermodynamics of nonalternating C/G base pairs in Z-DNA: the 1.3 angstroms crystal structure of the asymmetric hexanucleotide D(M(5)CGGGM(5) CG)/D(M(5)CGCCM(5)CG)
分子名称: DNA (5'-D(*(5CM)P*DGP*DGP*DGP*(5CM)P*DG)-3'), DNA (5'-D(*(MCY)P*GP*CP*CP*(5CM)P*G)-3'), DNA (5'-D(*(MCY)P*GP*GP*GP*(5CM)P*G)-3')
著者Schroth, G.P, Kagawa, T.F, Shing Ho, P.
登録日1993-11-11
公開日1994-01-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structure and thermodynamics of nonalternating C.G base pairs in Z-DNA: the 1.3-A crystal structure of the asymmetric hexanucleotide d(m5CGGGm5CG).d(m5CGCCm5CG).
Biochemistry, 32, 1993
1D39
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BU of 1d39 by Molmil
COVALENT MODIFICATION OF GUANINE BASES IN DOUBLE STRANDED DNA: THE 1.2 ANGSTROMS Z-DNA STRUCTURE OF D(CGCGCG) IN THE PRESENCE OF CUCL2
分子名称: COPPER (II) ION, DNA (5'-D(*CP*(CU)GP*CP*(CU)GP*CP*(CU)G)-3'), SODIUM ION
著者Kagawa, T.F, Geierstanger, B.H, Wang, A.H.-J, Ho, P.S.
登録日1991-05-07
公開日1992-04-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Covalent modification of guanine bases in double-stranded DNA. The 1.2-A Z-DNA structure of d(CGCGCG) in the presence of CuCl2.
J.Biol.Chem., 266, 1991
8BHD
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BU of 8bhd by Molmil
N-terminal domain of Plasmodium berghei glutamyl-tRNA synthetase (Tbxo4 derivative crystal structure)
分子名称: GLYCEROL, Glutamate--tRNA ligase, SULFATE ION, ...
著者Benas, P, Jaramillo Ponce, J.R, Legrand, P, Frugier, M, Sauter, C.
登録日2022-10-31
公開日2023-01-25
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献Solution X-ray scattering highlights discrepancies in Plasmodium multi-aminoacyl-tRNA synthetase complexes.
Protein Sci., 32, 2023
3UVP
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BU of 3uvp by Molmil
Human p38 MAP Kinase in Complex with a Benzamide Substituted Benzosuberone
分子名称: Mitogen-activated protein kinase 14, N-{2-fluoro-5-[(5-oxo-6,7,8,9-tetrahydro-5H-benzo[7]annulen-2-yl)amino]phenyl}benzamide, octyl beta-D-glucopyranoside
著者Mayer-Wrangowski, S.C, Richters, A, Gruetter, C, Rauh, D.
登録日2011-11-30
公開日2012-11-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Targeting the Hinge Glycine Flip and the Activation Loop: Novel Approach to Potent p38 alpha Inhibitors.
J.Med.Chem., 55, 2012
7AKR
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BU of 7akr by Molmil
Human ADP-ribosylserine hydrolase ARH3 mutant E41A in complex with ADP-ribose dimer
分子名称: 1,2-ETHANEDIOL, ADP-ribose glycohydrolase ARH3, CHLORIDE ION, ...
著者Ariza, A.
登録日2020-10-02
公開日2021-06-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mechanistic insights into the three steps of poly(ADP-ribosylation) reversal.
Nat Commun, 12, 2021
7AKS
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BU of 7aks by Molmil
Human ADP-ribosylserine hydrolase ARH3 mutant E41A in complex with H2B-S7-mar peptide
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ADP-ribose glycohydrolase ARH3, ...
著者Ariza, A.
登録日2020-10-02
公開日2021-06-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Mechanistic insights into the three steps of poly(ADP-ribosylation) reversal.
Nat Commun, 12, 2021
7AZT
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BU of 7azt by Molmil
X-ray crystallographic structure of (6-4)photolyase from Drosophila melanogaster at room temperature
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, RE11660p
著者Cellini, A, Wahlgren, W.Y, Henry, L, Westenhoff, S, Pandey, S.
登録日2020-11-17
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献The three-dimensional structure of Drosophila melanogaster (6-4) photolyase at room temperature.
Acta Crystallogr D Struct Biol, 77, 2021
7AYV
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X-ray crystallographic structure of (6-4)photolyase from Drosophila melanogaster at cryogenic temperature
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, RE11660p, ...
著者Cellini, A, Wahlgren, W.Y, Henry, L, Westenhoff, S.
登録日2020-11-13
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The three-dimensional structure of Drosophila melanogaster (6-4) photolyase at room temperature.
Acta Crystallogr D Struct Biol, 77, 2021

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