Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3KBL
DownloadVisualize
BU of 3kbl by Molmil
Crystal structure of the GLD-1 homodimerization domain from Caenorhabditis elegans N169A mutant at 2.28 A resolution
分子名称: Female germline-specific tumor suppressor gld-1
著者Beuck, C, Szymczyna, B.R, Kerkow, D.E, Carmel, A.B, Columbus, L, Stanfield, R.L, Williamson, J.R.
登録日2009-10-20
公開日2010-03-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structure of the GLD-1 homodimerization domain: insights into STAR protein-mediated translational regulation.
Structure, 18, 2010
5C7M
DownloadVisualize
BU of 5c7m by Molmil
CRYSTAL STRUCTURE OF E3 LIGASE ITCH WITH A UB VARIANT
分子名称: E3 ubiquitin-protein ligase Itchy homolog, Polyubiquitin-C
著者Walker, J.R, Hu, J, Dong, A, Wernimont, A, Zhang, W, Sidhu, S, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Tong, Y, Structural Genomics Consortium (SGC)
登録日2015-06-24
公開日2016-03-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献System-Wide Modulation of HECT E3 Ligases with Selective Ubiquitin Variant Probes.
Mol.Cell, 62, 2016
3KKA
DownloadVisualize
BU of 3kka by Molmil
Co-crystal structure of the sam domains of EPHA1 AND EPHA2
分子名称: CHLORIDE ION, EPHRIN TYPE-A RECEPTOR 1, EPHRIN TYPE-A RECEPTOR 2
著者Walker, J.R, Yermekbayeva, L, Butler-Cole, C, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2009-11-05
公開日2009-11-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Co-Crystal Structure of the SAM Domains of Human Ephrin Type-A Receptor 1 and Human Ephrin Type-A Receptor 2
To be Published
3P1I
DownloadVisualize
BU of 3p1i by Molmil
Ligand binding domain of human ephrin type-B receptor 3
分子名称: CHLORIDE ION, Ephrin type-B receptor 3, SULFATE ION
著者Walker, J.R, Yermekbayeva, L, Seitova, A, Kania, J, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2010-09-30
公開日2011-01-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Ligand Binding Domain of Human Ephb3
To be Published
3JYU
DownloadVisualize
BU of 3jyu by Molmil
Crystal structure of the N-terminal domains of the ubiquitin specific peptidase 4 (USP4)
分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, Ubiquitin carboxyl-terminal hydrolase
著者Bacik, J.P, Avvakumov, G, Walker, J.R, Xue, S, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2009-09-22
公開日2009-10-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Crystal structure of the N-terminal domains of the ubiquitin specific peptidase 4 (USP4)
To be Published
3K0W
DownloadVisualize
BU of 3k0w by Molmil
Crystal structure of the tandem IG-like C2-type 2 domains of the human mucosa-associated lymphoid tissue lymphoma translocation protein 1
分子名称: CHLORIDE ION, Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2
著者Walker, J.R, Qiu, L, Butler-Cole, C, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2009-09-25
公開日2009-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the Tandem Ig-Like C2-Type 2 Domains of the Human Mucosa-Associated Lymphoid Tissue Lymphoma Translocation Protein 1.
To be Published
5C1M
DownloadVisualize
BU of 5c1m by Molmil
Crystal structure of active mu-opioid receptor bound to the agonist BU72
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2R,3S,3aR,5aR,6R,11bR,11cS)-3a-methoxy-3,14-dimethyl-2-phenyl-2,3,3a,6,7,11c-hexahydro-1H-6,11b-(epiminoethano)-3,5a-methanonaphtho[2,1-g]indol-10-ol, CHOLESTEROL, ...
著者Huang, W.J, Manglik, A, Venkatakrishnan, A.J, Laeremans, T, Feinberg, E.N, Sanborn, A.L, Kato, H.E, Livingston, K.E, Thorsen, T.S, Kling, R, Granier, S, Gmeiner, P, Husbands, S.M, Traynor, J.R, Weis, W.I, Steyaert, J, Dror, R.O, Kobilka, B.K.
登録日2015-06-15
公開日2015-08-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structural insights into mu-opioid receptor activation.
Nature, 524, 2015
5CJ3
DownloadVisualize
BU of 5cj3 by Molmil
Crystal structure of the zorbamycin binding protein (ZbmA) from Streptomyces flavoviridis with zorbamycin
分子名称: CHLORIDE ION, COPPER (II) ION, Zbm binding protein, ...
著者Chang, C, Bigelow, L, Clancy, S, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Rudolf, J.D, Ma, M, Chang, C.-Y, Lohman, J.R, Yang, D, Shen, B, Enzyme Discovery for Natural Product Biosynthesis, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2015-07-13
公開日2015-07-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6499 Å)
主引用文献Crystal Structure of the Zorbamycin-Binding Protein ZbmA, the Primary Self-Resistance Element in Streptomyces flavoviridis ATCC21892.
Biochemistry, 54, 2015
5C7J
DownloadVisualize
BU of 5c7j by Molmil
CRYSTAL STRUCTURE OF NEDD4 WITH A UB VARIANT
分子名称: E3 ubiquitin-protein ligase NEDD4, Polyubiquitin-C
著者Walker, J.R, Hu, J, Dong, A, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Tong, Y, Structural Genomics Consortium (SGC)
登録日2015-06-24
公開日2016-03-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献System-Wide Modulation of HECT E3 Ligases with Selective Ubiquitin Variant Probes.
Mol.Cell, 62, 2016
3OS5
DownloadVisualize
BU of 3os5 by Molmil
SET7/9-Dnmt1 K142me1 complex
分子名称: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, Dnmt1, ...
著者Esteve, P.-O, Chang, Y, Samaranayake, M, Upadhyay, A.K, Horton, J.R, Feehery, G.R, Cheng, X, Pradhan, S.
登録日2010-09-08
公開日2010-12-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献A methylation and phosphorylation switch between an adjacent lysine and serine determines human DNMT1 stability.
Nat.Struct.Mol.Biol., 18, 2011
3MKH
DownloadVisualize
BU of 3mkh by Molmil
Podospora anserina Nitroalkane Oxidase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, NITROALKANE OXIDASE, ...
著者Tormos, J.R, Taylor, A.B, Daubner, S.C, Hart, P.J, Fitzpatrick, P.F.
登録日2010-04-14
公開日2010-06-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.995 Å)
主引用文献Identification of a hypothetical protein from Podospora anserina as a nitroalkane oxidase.
Biochemistry, 49, 2010
5CEH
DownloadVisualize
BU of 5ceh by Molmil
Structure of histone lysine demethylase KDM5A in complex with selective inhibitor
分子名称: 7-oxo-5-phenyl-6-(propan-2-yl)-4,7-dihydropyrazolo[1,5-a]pyrimidine-3-carbonitrile, Lysine-specific demethylase 5A, NICKEL (II) ION, ...
著者Kiefer, J.R, Vinogradova, M.
登録日2015-07-06
公開日2016-05-18
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献An inhibitor of KDM5 demethylases reduces survival of drug-tolerant cancer cells.
Nat.Chem.Biol., 12, 2016
3K6T
DownloadVisualize
BU of 3k6t by Molmil
Crystal structure of the GLD-1 homodimerization domain from Caenorhabditis elegans at 2.04 A resolution
分子名称: Female germline-specific tumor suppressor gld-1
著者Beuck, C, Szymczyna, B.R, Kerkow, D.E, Carmel, A.B, Columbus, L, Stanfield, R.L, Williamson, J.R.
登録日2009-10-09
公開日2010-03-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structure of the GLD-1 homodimerization domain: insights into STAR protein-mediated translational regulation.
Structure, 18, 2010
5CEI
DownloadVisualize
BU of 5cei by Molmil
Crystal structure of CDK8:Cyclin C complex with compound 22
分子名称: 1,2-ETHANEDIOL, 4-(4-iodophenoxy)-N-methylthieno[2,3-c]pyridine-2-carboxamide, Cyclin-C, ...
著者Kiefer, J.R, Schneider, E.V, Maskos, K, Koehler, M.F.T.
登録日2015-07-06
公開日2016-02-10
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Development of a Potent, Specific CDK8 Kinase Inhibitor Which Phenocopies CDK8/19 Knockout Cells.
Acs Med.Chem.Lett., 7, 2016
5CHH
DownloadVisualize
BU of 5chh by Molmil
Crystal structure of transcriptional regulator CdpR from Pseudomonas aeruginosa
分子名称: AraC family transcriptional regulator
著者Zhao, J.R, Yu, X, Zhu, M, Kang, H.P, Kong, W.N, Ma, J.B, Deng, X, Gan, J.H, Liang, H.H.
登録日2015-07-10
公開日2016-05-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and Molecular Mechanism of CdpR Involved in Quorum-Sensing and Bacterial Virulence in Pseudomonas aeruginosa
Plos Biol., 14, 2016
5CT9
DownloadVisualize
BU of 5ct9 by Molmil
G158E/K44E/R57E/Y49E Bacillus subtilis lipase A with 5% [BMIM][Cl]
分子名称: 1-butyl-3-methyl-1H-imidazol-3-ium, CHLORIDE ION, Esterase
著者Nordwald, E.M, Plaks, J.G, Snell, J.R, Sousa, M.C, Kaar, J.L.
登録日2015-07-23
公開日2015-11-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystallographic Investigation of Imidazolium Ionic Liquid Effects on Enzyme Structure.
Chembiochem, 16, 2015
3J3Q
DownloadVisualize
BU of 3j3q by Molmil
Atomic-level structure of the entire HIV-1 capsid
分子名称: capsid protein
著者Perilla, J.R, Zhao, G, Zhang, P, Schulten, K.J.
登録日2013-04-12
公開日2013-05-29
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY
主引用文献Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
5CRI
DownloadVisualize
BU of 5cri by Molmil
Wild-type Bacillus subtilis lipase A with 0% [BMIM][Cl]
分子名称: Esterase, SULFATE ION
著者Nordwald, E.M, Plaks, J.G, Snell, J.R, Sousa, M.C, Kaar, J.L.
登録日2015-07-22
公開日2015-11-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Crystallographic Investigation of Imidazolium Ionic Liquid Effects on Enzyme Structure.
Chembiochem, 16, 2015
5CT6
DownloadVisualize
BU of 5ct6 by Molmil
Wild-type Bacillus subtilis lipase A with 20% [BMIM][Cl]
分子名称: 1-butyl-3-methyl-1H-imidazol-3-ium, CHLORIDE ION, Lipase EstA
著者Nordwald, E.M, Plaks, J.G, Snell, J.R, Sousa, M.C, Kaar, J.L.
登録日2015-07-23
公開日2015-11-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Crystallographic Investigation of Imidazolium Ionic Liquid Effects on Enzyme Structure.
Chembiochem, 16, 2015
5CT8
DownloadVisualize
BU of 5ct8 by Molmil
G158E/K44E/R57E/Y49E Bacillus subtilis lipase A with 0% [BMIM][Cl]
分子名称: Quadruple mutant lipase A, SULFATE ION
著者Nordwald, E.M, Plaks, J.G, Snell, J.R, Sousa, M.C, Kaar, J.L.
登録日2015-07-23
公開日2015-11-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Crystallographic Investigation of Imidazolium Ionic Liquid Effects on Enzyme Structure.
Chembiochem, 16, 2015
3P8D
DownloadVisualize
BU of 3p8d by Molmil
Crystal structure of the second Tudor domain of human PHF20 (homodimer form)
分子名称: Medulloblastoma antigen MU-MB-50.72
著者Cui, G, Lee, J, Thompson, J.R, Botuyan, M.V, Mer, G.
登録日2010-10-13
公開日2011-06-22
最終更新日2012-09-26
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献PHF20 is an effector protein of p53 double lysine methylation that stabilizes and activates p53.
Nat.Struct.Mol.Biol., 19, 2012
5CT4
DownloadVisualize
BU of 5ct4 by Molmil
Wild-type Bacillus subtilis lipase A with 5% [BMIM][Cl]
分子名称: 1-butyl-3-methyl-1H-imidazol-3-ium, CHLORIDE ION, Esterase, ...
著者Nordwald, E.M, Plaks, J.G, Snell, J.R, Sousa, M.C, Kaar, J.L.
登録日2015-07-23
公開日2015-11-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Crystallographic Investigation of Imidazolium Ionic Liquid Effects on Enzyme Structure.
Chembiochem, 16, 2015
3MVD
DownloadVisualize
BU of 3mvd by Molmil
Crystal structure of the chromatin factor RCC1 in complex with the nucleosome core particle
分子名称: DNA (146-MER), Histone H2A, Histone H2B 1.1, ...
著者Makde, R.D, England, J.R, Yennawar, H.P, Tan, S.
登録日2010-05-04
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of RCC1 chromatin factor bound to the nucleosome core particle.
Nature, 467, 2010
5CUR
DownloadVisualize
BU of 5cur by Molmil
G158E/K44E/R57E/Y49E Bacillus subtilis lipase A with 20% [BMIM][Cl]
分子名称: 1-butyl-3-methyl-1H-imidazol-3-ium, CHLORIDE ION, Esterase
著者Nordwald, E.M, Plaks, J.G, Snell, J.R, Sousa, M.C, Kaar, J.L.
登録日2015-07-24
公開日2015-11-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.302 Å)
主引用文献Crystallographic Investigation of Imidazolium Ionic Liquid Effects on Enzyme Structure.
Chembiochem, 16, 2015
5CXS
DownloadVisualize
BU of 5cxs by Molmil
Crystal Structure of Isoform 2 of Purine Nucleoside Phosphorylase complexed with MES
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Purine nucleoside phosphorylase
著者Torini, J.R, Romanello, L, Bird, L, Owens, R, Brandao-Neto, J, Pereira, H.M.
登録日2015-07-29
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The molecular structure of Schistosoma mansoni PNP isoform 2 provides insights into the nucleoside selectivity of PNPs.
PLoS ONE, 13, 2018

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon