Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3HDN
DownloadVisualize
BU of 3hdn by Molmil
Crystal structure of serum and glucocorticoid-regulated kinase 1 in complex with compound 2
分子名称: Serine/threonine-protein kinase Sgk1, [4-(5-naphthalen-2-yl-1H-pyrrolo[2,3-b]pyridin-3-yl)phenyl]acetic acid
著者Zhao, B, Hammond, M.
登録日2009-05-07
公開日2009-06-30
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Design and synthesis of orally bioavailable serum and glucocorticoid-regulated kinase 1 (SGK1) inhibitors.
Bioorg.Med.Chem.Lett., 19, 2009
3HDM
DownloadVisualize
BU of 3hdm by Molmil
Crystal structure of serum and glucocorticoid-regulated kinase 1 in complex with compound 1
分子名称: 4-(5-phenyl-1H-pyrrolo[2,3-b]pyridin-3-yl)benzoic acid, Serine/threonine-protein kinase Sgk1
著者Zhao, B, Hammond, M.
登録日2009-05-07
公開日2009-06-30
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Design and synthesis of orally bioavailable serum and glucocorticoid-regulated kinase 1 (SGK1) inhibitors.
Bioorg.Med.Chem.Lett., 19, 2009
3II9
DownloadVisualize
BU of 3ii9 by Molmil
Crystal structure of glutaryl-coa dehydrogenase from Burkholderia pseudomallei at 1.73 Angstrom
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Glutaryl-CoA dehydrogenase, ...
著者Ismagilov, R.F, Li, L, Du, W.B, Staker, B, Accelerated Technologies Center for Gene to 3D Structure (ATCG3D), Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2009-07-31
公開日2009-12-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献User-loaded SlipChip for equipment-free multiplexed nanoliter-scale experiments.
J.Am.Chem.Soc., 132, 2010
6OCQ
DownloadVisualize
BU of 6ocq by Molmil
Crystal structure of RIP1 kinase in complex with a pyrrolidine
分子名称: 1-[(2S)-2-(3-fluorophenyl)pyrrolidin-1-yl]-2,2-dimethylpropan-1-one, Receptor-interacting serine/threonine-protein kinase 1, SULFATE ION
著者Thorpe, J.H, Harris, P.A.
登録日2019-03-25
公開日2019-05-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.793 Å)
主引用文献Discovery and Lead-Optimization of 4,5-Dihydropyrazoles as Mono-Kinase Selective, Orally Bioavailable and Efficacious Inhibitors of Receptor Interacting Protein 1 (RIP1) Kinase.
J.Med.Chem., 62, 2019
6OYW
DownloadVisualize
BU of 6oyw by Molmil
ASK1 kinase domain in complex with Compound 11
分子名称: (19S)-19-methyl-16,17,18,19-tetrahydro-8,4-(azeno)[1,2,4]triazolo[4,3-f][1,6,13]benzoxadiazacyclohexadecin-10(9H)-one, MAGNESIUM ION, Mitogen-activated protein kinase kinase kinase 5
著者Marcotte, D.J.
登録日2019-05-15
公開日2019-11-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.603 Å)
主引用文献Rational Design and Optimization of a Novel Class of Macrocyclic Apoptosis Signal-Regulating Kinase 1 Inhibitors.
J.Med.Chem., 62, 2019
6P5C
DownloadVisualize
BU of 6p5c by Molmil
Bacillus Fragment DNA polymerase mutant I716M
分子名称: DNA (5'-D(*CP*GP*AP*TP*CP*AP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*TP*GP*AP*TP*CP*G)-3'), DNA polymerase I, ...
著者Wu, E.Y.
登録日2019-05-30
公開日2020-03-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The importance of Ile716 toward the mutagenicity of 8-Oxo-2'-deoxyguanosine with Bacillus fragment DNA polymerase.
DNA Repair (Amst.), 89, 2020
6OYT
DownloadVisualize
BU of 6oyt by Molmil
ASK1 kinase domain in complex with GS-4997
分子名称: 5-(4-cyclopropyl-1H-imidazol-1-yl)-2-fluoro-4-methyl-N-{6-[4-(propan-2-yl)-4H-1,2,4-triazol-3-yl]pyridin-2-yl}benzamide, ACETATE ION, Mitogen-activated protein kinase kinase kinase 5
著者Marcotte, D.J.
登録日2019-05-15
公開日2019-11-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.824 Å)
主引用文献Rational Design and Optimization of a Novel Class of Macrocyclic Apoptosis Signal-Regulating Kinase 1 Inhibitors.
J.Med.Chem., 62, 2019
6VRE
DownloadVisualize
BU of 6vre by Molmil
Structure of ASK1 bound to BIO-1772961
分子名称: 3-methoxy-N-{6-[4-(propan-2-yl)-4H-1,2,4-triazol-3-yl]pyridin-2-yl}-1-(pyrazin-2-yl)-1H-pyrazole-4-carboxamide, DIMETHYL SULFOXIDE, Mitogen-activated protein kinase kinase kinase 5
著者Chodaparambil, J.V, Marcotte, D.J.
登録日2020-02-07
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Discovery of CNS-Penetrant Apoptosis Signal-Regulating Kinase 1 (ASK1) Inhibitors.
Acs Med.Chem.Lett., 11, 2020
8UR5
DownloadVisualize
BU of 8ur5 by Molmil
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-1heptad-I53_dn5 (local refinement of TH-1heptad)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Trimer head HA,Hemagglutinin HA1 chain
著者Park, Y.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2023-10-25
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Antigen spacing on protein nanoparticles influences antibody responses to vaccination.
Cell Rep, 42, 2023
8UR7
DownloadVisualize
BU of 8ur7 by Molmil
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-6heptad-I53_dn5 (local refinement of TH-6heptad)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Trimer head HA,Hemagglutinin HA1 chain
著者Park, Y.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2023-10-25
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Antigen spacing on protein nanoparticles influences antibody responses to vaccination.
Cell Rep, 42, 2023
5AMV
DownloadVisualize
BU of 5amv by Molmil
Structural insights into the loss of catalytic competence in pectate lyase at low pH
分子名称: ACETATE ION, CALCIUM ION, GLYCEROL, ...
著者Teixeira, S.C.M, Ali, S, Sondergaard, C, Pickersgill, R.
登録日2015-09-02
公開日2015-09-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural Insights Into the Loss of Catalytic Competence in Pectate Lyase Activity at Low Ph.
FEBS Lett., 589, 2015
1B50
DownloadVisualize
BU of 1b50 by Molmil
NMR STRUCTURE OF HUMAN MIP-1A D26A, 10 STRUCTURES
分子名称: MIP-1A
著者Waltho, J.P, Higgins, L.D, Craven, C.J, Tan, P, Dudgeon, T.
登録日1999-01-11
公開日1999-07-22
最終更新日2021-11-03
実験手法SOLUTION NMR
主引用文献Identification of amino acid residues critical for aggregation of human CC chemokines macrophage inflammatory protein (MIP)-1alpha, MIP-1beta, and RANTES. Characterization of active disaggregated chemokine variants.
J.Biol.Chem., 274, 1999
6Z8L
DownloadVisualize
BU of 6z8l by Molmil
Alpha-Amylase in complex with probe fragments
分子名称: CALCIUM ION, CHLORIDE ION, Pancreatic alpha-amylase, ...
著者Adam, S, Koehnke, J.
登録日2020-06-02
公開日2020-12-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.40000367 Å)
主引用文献Enhancing glycan stability via site-selective fluorination: modulating substrate orientation by molecular design.
Chem Sci, 12, 2020
1K6A
DownloadVisualize
BU of 1k6a by Molmil
Structural studies on the mobility in the active site of the Thermoascus aurantiacus xylanase I
分子名称: xylanase I
著者Lo Leggio, L, Kalogiannis, S, Eckert, K, Teixeira, S.C.M, Bhat, M.K, Andrei, C, Pickersgill, R.W, Larsen, S.
登録日2001-10-15
公開日2002-07-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Substrate specificity and subsite mobility in T. aurantiacus xylanase 10A.
FEBS LETT., 509, 2001
1B53
DownloadVisualize
BU of 1b53 by Molmil
NMR STRUCTURE OF HUMAN MIP-1A D26A, MINIMIZED AVERAGE STRUCTURE
分子名称: MIP-1A
著者Waltho, J.P, Higgins, L.D, Craven, C.J, Tan, P, Dudgeon, T.
登録日1999-01-11
公開日1999-07-22
最終更新日2021-11-03
実験手法SOLUTION NMR
主引用文献Identification of amino acid residues critical for aggregation of human CC chemokines macrophage inflammatory protein (MIP)-1alpha, MIP-1beta, and RANTES. Characterization of active disaggregated chemokine variants.
J.Biol.Chem., 274, 1999
1GOM
DownloadVisualize
BU of 1gom by Molmil
Thermostable xylanase I from Thermoascus aurantiacus- Crystal form I
分子名称: ENDO-1,4-BETA-XYLANASE
著者Lo Leggio, L, Pickersgill, R.W.
登録日2001-10-22
公開日2001-11-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Substrate Specificity and Subsite Mobility in T. Aurantiacus Xylanase 10A
FEBS Lett., 509, 2001
8A1S
DownloadVisualize
BU of 8a1s by Molmil
Structure of murine perforin-2 (Mpeg1) pore in twisted form
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Macrophage-expressed gene 1 protein
著者Yu, X, Ni, T, Zhang, P, Gilbert, R.
登録日2022-06-02
公開日2022-07-20
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structures of perforin-2 in isolation and assembled on a membrane suggest a mechanism for pore formation.
Embo J., 41, 2022
8A1D
DownloadVisualize
BU of 8a1d by Molmil
Structure of murine perforin-2 (Mpeg1) pore in ring form
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE, Macrophage-expressed gene 1 protein
著者Yu, X, Ni, T, Zhang, P, Gilbert, R.
登録日2022-06-01
公開日2022-07-20
最終更新日2022-12-14
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM structures of perforin-2 in isolation and assembled on a membrane suggest a mechanism for pore formation.
Embo J., 41, 2022
1GOK
DownloadVisualize
BU of 1gok by Molmil
Thermostable xylanase I from Thermoascus aurantiacus- Crystal form II
分子名称: ENDO-1,4-BETA-XYLANASE
著者Lo Leggio, L, Pickersgill, R.W.
登録日2001-10-22
公開日2001-10-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Substrate Specificity and Subsite Mobility in T. Aurantiacus Xylanase 10A
FEBS Lett., 509, 2001
3HV0
DownloadVisualize
BU of 3hv0 by Molmil
Tryptophanyl-tRNA synthetase from Cryptosporidium parvum
分子名称: TRYPTOPHAN, Tryptophanyl-tRNA synthetase
著者Arakaki, T, Merritt, E.A, Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
登録日2009-06-15
公開日2009-06-30
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Crystal structures of three protozoan homologs of tryptophanyl-tRNA synthetase.
Mol.Biochem.Parasitol., 177, 2011
5JX8
DownloadVisualize
BU of 5jx8 by Molmil
New improved structure of D4 in trigonal space group
分子名称: GLYCEROL, SULFATE ION, Uracil-DNA glycosylase
著者Schormann, N, Chattopadhyay, D.
登録日2016-05-12
公開日2017-02-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Poxvirus uracil-DNA glycosylase-An unusual member of the family I uracil-DNA glycosylases.
Protein Sci., 25, 2016
5JX3
DownloadVisualize
BU of 5jx3 by Molmil
Wild type D4 in orthorhombic space group
分子名称: CHLORIDE ION, GLYCEROL, Uracil-DNA glycosylase
著者Schormann, N, Chattopadhyay, D.
登録日2016-05-12
公開日2016-06-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Poxvirus uracil-DNA glycosylase-An unusual member of the family I uracil-DNA glycosylases.
Protein Sci., 25, 2016
7AWK
DownloadVisualize
BU of 7awk by Molmil
Crystal structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955)
分子名称: Probable endoribonuclease HigB1
著者Bigot, D.J, Guillet, V, Mourey, L.
登録日2020-11-08
公開日2021-11-24
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Substrate recognition and cryo-EM structure of the ribosome-bound TAC toxin of Mycobacterium tuberculosis.
Nat Commun, 13, 2022
5JX0
DownloadVisualize
BU of 5jx0 by Molmil
Temperature sensitive D4 mutant L110F
分子名称: CHLORIDE ION, GLYCEROL, Uracil-DNA glycosylase
著者Schormann, N, Chattopadhyay, D.
登録日2016-05-12
公開日2017-02-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Poxvirus uracil-DNA glycosylase-An unusual member of the family I uracil-DNA glycosylases.
Protein Sci., 25, 2016
3HZR
DownloadVisualize
BU of 3hzr by Molmil
Tryptophanyl-tRNA synthetase homolog from Entamoeba histolytica
分子名称: Tryptophanyl-tRNA synthetase
著者Arakaki, T, Merritt, E.A, Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
登録日2009-06-24
公開日2009-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structures of three protozoan homologs of tryptophanyl-tRNA synthetase.
Mol.Biochem.Parasitol., 177, 2011

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon