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6E80
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BU of 6e80 by Molmil
Crystal structure of the Corn aptamer in unliganded state
分子名称: ACETATE ION, IRIDIUM HEXAMMINE ION, IRIDIUM ION, ...
著者Sjekloca, L, Ferre-D'Amare, A.R.
登録日2018-07-27
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献Binding between G Quadruplexes at the Homodimer Interface of the Corn RNA Aptamer Strongly Activates Thioflavin T Fluorescence.
Cell Chem Biol, 26, 2019
6E84
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BU of 6e84 by Molmil
Crystal structure of the Corn aptamer in complex with TO
分子名称: 1-methyl-4-[(Z)-(3-methyl-1,3-benzothiazol-2(3H)-ylidene)methyl]quinolin-1-ium, POTASSIUM ION, RNA (36-MER)
著者Sjekloca, L, Ferre-D'Amare, A.R.
登録日2018-07-27
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献Binding between G Quadruplexes at the Homodimer Interface of the Corn RNA Aptamer Strongly Activates Thioflavin T Fluorescence.
Cell Chem Biol, 26, 2019
6E81
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BU of 6e81 by Molmil
Crystal structure of the Corn aptamer in complex with ThT
分子名称: 2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium, POTASSIUM ION, RNA (36-MER)
著者Sjekloca, L, Ferre-D'Amare, A.R.
登録日2018-07-27
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.721 Å)
主引用文献Binding between G Quadruplexes at the Homodimer Interface of the Corn RNA Aptamer Strongly Activates Thioflavin T Fluorescence.
Cell Chem Biol, 26, 2019
1ZL3
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BU of 1zl3 by Molmil
Coupling of active site motions and RNA binding
分子名称: 5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*UP*(FLO) UP*CP*GP*AP*UP*CP*CP*CP*GP*UP*UP*GP*C)-3', SULFATE ION, tRNA pseudouridine synthase B
著者Hoang, C, Hamilton, C.S, Mueller, E.G, Ferre-D'Amare, A.R.
登録日2005-05-05
公開日2005-08-09
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Precursor complex structure of pseudouridine synthase TruB suggests coupling of active site perturbations to an RNA-sequestering peripheral protein domain
Protein Sci., 14, 2005
2APO
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BU of 2apo by Molmil
Crystal Structure of the Methanococcus jannaschii Cbf5 Nop10 Complex
分子名称: POTASSIUM ION, Probable tRNA pseudouridine synthase B, Ribosome biogenesis protein Nop10, ...
著者Hamma, T, Reichow, S.L, Varani, G, Ferre-D'Amare, A.R.
登録日2005-08-16
公開日2005-11-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The Cbf5-Nop10 complex is a molecular bracket that organizes box H/ACA RNPs.
Nat.Struct.Mol.Biol., 12, 2005
2AQA
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BU of 2aqa by Molmil
NMR structural analysis of Nop10p from Saccharomyces cerevisiae
分子名称: H/ACA ribonucleoprotein complex subunit 3
著者Hamma, T, Reichow, S.L, Varani, G, Ferre-D'Amare, A.R.
登録日2005-08-17
公開日2005-11-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The Cbf5-Nop10 complex is a molecular bracket that organizes box H/ACA RNPs.
Nat.Struct.Mol.Biol., 12, 2005
2GCS
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BU of 2gcs by Molmil
Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
分子名称: MAGNESIUM ION, glmS ribozyme RNA, glmS ribozyme amino RNA inhibitor
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-03-14
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2GCV
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BU of 2gcv by Molmil
Post-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, glmS ribozyme RNA, ...
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-03-14
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2AQC
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BU of 2aqc by Molmil
NMR Structural analysis of archaeal Nop10
分子名称: Ribosome biogenesis protein Nop10, ZINC ION
著者Hamma, T, Reichow, S.L, Varani, G, Ferre-D'Amare, A.R.
登録日2005-08-17
公開日2005-11-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The Cbf5-Nop10 complex is a molecular bracket that organizes box H/ACA RNPs.
Nat.Struct.Mol.Biol., 12, 2005
2H0Z
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BU of 2h0z by Molmil
Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme bound to glucose-6-phosphate
分子名称: 6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, glmS ribozyme RNA, ...
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-05-15
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2HO7
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BU of 2ho7 by Molmil
Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme bound to glucose-6-phosphate
分子名称: 6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, glmS ribozyme RNA, ...
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-07-13
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2HOK
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BU of 2hok by Molmil
Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, calcium ions
分子名称: CALCIUM ION, THIAMINE DIPHOSPHATE, thi-box riboswitch
著者Edwards, T.E, Ferre-D'Amare, A.R.
登録日2006-07-14
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal Structures of the Thi-Box Riboswitch Bound to Thiamine Pyrophosphate Analogs Reveal Adaptive RNA-Small Molecule Recognition
Structure, 14, 2006
2HOL
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BU of 2hol by Molmil
Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, barium ions
分子名称: BARIUM ION, CALCIUM ION, MAGNESIUM ION, ...
著者Edwards, T.E, Ferre-D'Amare, A.R.
登録日2006-07-14
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structures of the Thi-Box Riboswitch Bound to Thiamine Pyrophosphate Analogs Reveal Adaptive RNA-Small Molecule Recognition
Structure, 14, 2006
2HOO
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BU of 2hoo by Molmil
Crystal structure of an E. coli thi-box riboswitch bound to benfotiamine
分子名称: CALCIUM ION, S-BENZOYLTHIAMINE O-MONOPHOSPHATE, thi-box riboswitch
著者Edwards, T.E, Ferre-D'Amare, A.R.
登録日2006-07-14
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structures of the Thi-Box Riboswitch Bound to Thiamine Pyrophosphate Analogs Reveal Adaptive RNA-Small Molecule Recognition
Structure, 14, 2006
5V3F
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BU of 5v3f by Molmil
Co-crystal structure of the fluorogenic RNA Mango
分子名称: 4-{[(2S)-3-{2,16-dioxo-20-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-6,9,12-trioxa-3,15-diazaicosan-1-yl}-2,3-dihydro-1,3-benzothiazol-2-yl]methyl}-1-methylquinolin-1-ium, PHOSPHATE ION, POTASSIUM ION, ...
著者Trachman, R.J, Ferre-D'Amare, A.R.
登録日2017-03-07
公開日2017-05-24
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for high-affinity fluorophore binding and activation by RNA Mango.
Nat. Chem. Biol., 13, 2017
2H0X
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BU of 2h0x by Molmil
Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
分子名称: MAGNESIUM ION, glmS ribozyme RNA, glmS ribozyme amino RNA inhibitor
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-05-15
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2H0S
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BU of 2h0s by Molmil
Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
分子名称: MAGNESIUM ION, glmS ribozyme RNA, glmS ribozyme deoxy RNA inhibitor
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-05-15
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2H0W
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BU of 2h0w by Molmil
Post-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, glmS ribozyme RNA, ...
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-05-15
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2HO6
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BU of 2ho6 by Molmil
Post-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, glmS ribozyme RNA, ...
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-07-13
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2HOM
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BU of 2hom by Molmil
Crystal structure of an E. coli thi-box riboswitch bound to thiamine monophosphate
分子名称: CALCIUM ION, MAGNESIUM ION, THIAMIN PHOSPHATE, ...
著者Edwards, T.E, Ferre-D'Amare, A.R.
登録日2006-07-14
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Crystal Structures of the Thi-Box Riboswitch Bound to Thiamine Pyrophosphate Analogs Reveal Adaptive RNA-Small Molecule Recognition
Structure, 14, 2006
2HOJ
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BU of 2hoj by Molmil
Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ions
分子名称: MAGNESIUM ION, MANGANESE (II) ION, THIAMINE DIPHOSPHATE, ...
著者Edwards, T.E, Ferre-D'Amare, A.R.
登録日2006-07-14
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structures of the Thi-Box Riboswitch Bound to Thiamine Pyrophosphate Analogs Reveal Adaptive RNA-Small Molecule Recognition
Structure, 14, 2006
2HOP
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BU of 2hop by Molmil
Crystal structure of an E. coli thi-box riboswitch bound to pyrithiamine
分子名称: 1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-(2-HYDROXYETHYL)-2-METHYLPYRIDINIUM, CALCIUM ION, MAGNESIUM ION, ...
著者Edwards, T.E, Ferre-D'Amare, A.R.
登録日2006-07-14
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal Structures of the Thi-Box Riboswitch Bound to Thiamine Pyrophosphate Analogs Reveal Adaptive RNA-Small Molecule Recognition
Structure, 14, 2006
6OD9
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BU of 6od9 by Molmil
Co-crystal structure of the Fusobacterium ulcerans ZTP riboswitch using an X-ray free-electron laser
分子名称: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, CESIUM ION, MAGNESIUM ION, ...
著者Jones, C.P, Tran, B, Ferre-D'Amare, A.R.
登録日2019-03-26
公開日2019-07-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.102 Å)
主引用文献Co-crystal structure of the Fusobacterium ulcerans ZTP riboswitch using an X-ray free-electron laser.
Acta Crystallogr.,Sect.F, 75, 2019
3OT0
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BU of 3ot0 by Molmil
Crystal structure of a DNA containing the rigid nitroxide spin-labeled nucleotide C-spin
分子名称: Spin-labeled DNA
著者Edwards, T.E.
登録日2010-09-10
公開日2011-01-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7004 Å)
主引用文献Crystal structure of a DNA containing the planar, phenoxazine-derived bi-functional spectroscopic probe C.
Nucleic Acids Res., 10, 2011
1AM9
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BU of 1am9 by Molmil
HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER
分子名称: DNA (5'-D(*CP*AP*TP*GP*AP*GP*AP*TP*CP*AP*CP*CP*CP*CP*AP*CP*T P*GP*CP*AP*A)-3'), DNA (5'-D(*TP*TP*GP*CP*AP*GP*TP*GP*GP*GP*GP*TP*GP*AP*TP*CP*T )-3'), MAGNESIUM ION, ...
著者Parraga, A, Burley, S.K.
登録日1997-06-25
公開日1998-07-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Co-crystal structure of sterol regulatory element binding protein 1a at 2.3 A resolution.
Structure, 6, 1998

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