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8RW2
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BU of 8rw2 by Molmil
Structure of a chair-type antiparallel quadruplex-duplex hybrid at pH 6
分子名称: DNA (33-MER)
著者Vianney, Y.M, Weisz, K.
登録日2024-02-02
公開日2024-03-27
最終更新日2024-06-05
実験手法SOLUTION NMR
主引用文献A pH-Responsive Topological Switch Based on a DNA Quadruplex-Duplex Hybrid.
Chemistry, 30, 2024
7ZEM
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BU of 7zem by Molmil
Structure of a parallel G-quadruplex with a snapback loop
分子名称: DNA (5'-D(*(DT5)P*GP*GP*CP*TP*AP*GP*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3')
著者Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K.
登録日2022-03-31
公開日2022-06-15
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Guiding the folding of G-quadruplexes through loop residue interactions.
Nucleic Acids Res., 50, 2022
7ZEO
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BU of 7zeo by Molmil
Structure of a hybrid-type G-quadruplex with a snapback loop and an all-syn G-column (hybrid-1R)
分子名称: DNA (5'-D(*(DG5)P*(BGM)P*CP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3')
著者Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K.
登録日2022-03-31
公開日2022-06-15
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Guiding the folding of G-quadruplexes through loop residue interactions.
Nucleic Acids Res., 50, 2022
7ZEK
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BU of 7zek by Molmil
Structure of a hybrid-type G-quadruplex with a snapback loop (hybrid 1R')
分子名称: DNA (5'-D(*(DG5)P*GP*CP*TP*AP*(BG)P*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3')
著者Jana, J, Vianney, Y.M, Schroeder, N, Weisz, K.
登録日2022-03-31
公開日2022-06-22
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Guiding the folding of G-quadruplexes through loop residue interactions.
Nucleic Acids Res., 50, 2022
5YNX
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BU of 5ynx by Molmil
Structure of house dust mite allergen Der f 21 in PEG400
分子名称: Allergen Der f 21, BETA-MERCAPTOETHANOL, GLYCEROL, ...
著者Ng, C.L, Chew, F.T, Pang, S.L, Ho, K.L, Teh, A.H, Waterman, J, Rambo, R, Mathavan, I, Beis, K, Say, Y.H.
登録日2017-10-25
公開日2019-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Crystal structure and epitope analysis of house dust mite allergen Der f 21.
Sci Rep, 9, 2019
6ZL9
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BU of 6zl9 by Molmil
Structure of a parallel c-Myc modified with 5' duplex stem-loop overhang
分子名称: DNA (35-MER)
著者Vianney, Y.M, Weisz, K.
登録日2020-06-30
公開日2020-10-07
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Quadruplex-Duplex Junction: A High-Affinity Binding Site for Indoloquinoline Ligands.
Chemistry, 26, 2020
6ZTE
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BU of 6zte by Molmil
Structure of a parallel c-myc modified with 5' duplex stem-loop and 3' diagonal snap-back loop
分子名称: DNA (36-MER)
著者Vianney, Y.M, Weisz, K.
登録日2020-07-20
公開日2020-10-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Quadruplex-Duplex Junction: A High-Affinity Binding Site for Indoloquinoline Ligands.
Chemistry, 26, 2020
6ZL2
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BU of 6zl2 by Molmil
Structure of a parallel c-Myc modified with 3' duplex stem-loop overhang
分子名称: DNA (36-MER)
著者Vianney, Y.M, Weisz, K.
登録日2020-06-30
公開日2020-10-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Quadruplex-Duplex Junction: A High-Affinity Binding Site for Indoloquinoline Ligands.
Chemistry, 26, 2020
2W1B
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BU of 2w1b by Molmil
The structure of the efflux pump AcrB in complex with bile acid
分子名称: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, ACRIFLAVIN RESISTANCE PROTEIN B
著者Drew, D, Klepsch, M.M, Newstead, S, Flaig, R, De Gier, J.W, Iwata, S, Beis, K.
登録日2008-10-17
公開日2008-12-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.85 Å)
主引用文献The Structure of the Efflux Pump Acrb in Complex with Bile Acid.
Mol.Membr.Biol., 25, 2008
3RRN
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BU of 3rrn by Molmil
S. cerevisiae dbp5 l327v bound to gle1 h337r and ip6
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, INOSITOL HEXAKISPHOSPHATE, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2011-04-29
公開日2011-05-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (4.001 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP6 in mRNA export.
Nature, 472, 2011
3RRM
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BU of 3rrm by Molmil
S. cerevisiae dbp5 l327v bound to nup159, gle1 h337r, ip6 and adp
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, INOSITOL HEXAKISPHOSPHATE, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2011-04-29
公開日2011-05-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP6 in mRNA export.
Nature, 472, 2011
3PEU
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BU of 3peu by Molmil
S. cerevisiae Dbp5 L327V C-terminal domain bound to Gle1 H337R and IP6
分子名称: ATP-dependent RNA helicase DBP5, GLYCEROL, INOSITOL HEXAKISPHOSPHATE, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2010-10-27
公開日2011-03-23
最終更新日2020-10-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
3PEW
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BU of 3pew by Molmil
S. cerevisiae Dbp5 L327V bound to RNA and ADP BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, BERYLLIUM TRIFLUORIDE ION, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2010-10-27
公開日2011-03-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
3PEV
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BU of 3pev by Molmil
S. cerevisiae Dbp5 L327V C-terminal domain bound to Gle1 and IP6
分子名称: ATP-dependent RNA helicase DBP5, GLYCEROL, INOSITOL HEXAKISPHOSPHATE, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2010-10-27
公開日2011-03-23
最終更新日2020-10-14
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
3PEY
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BU of 3pey by Molmil
S. cerevisiae Dbp5 bound to RNA and ADP BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, BERYLLIUM TRIFLUORIDE ION, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2010-10-27
公開日2011-03-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
2X26
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BU of 2x26 by Molmil
Crystal structure of the periplasmic aliphatic sulphonate binding protein SsuA from Escherichia coli
分子名称: GLYCEROL, PERIPLASMIC ALIPHATIC SULPHONATES-BINDING PROTEIN
著者Beale, J, Lee, S, Iwata, S, Beis, K.
登録日2010-01-11
公開日2010-04-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of the Aliphatic Sulfonate-Binding Protein Ssua from Escherichia Coli
Acta Crystallogr.,Sect.F, 66, 2010
2KTT
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BU of 2ktt by Molmil
Solution Structure of a Covalently Bound Pyrrolo[2,1-c][1,4]benzodiazepine-Benzimidazole Hybrid to a 10mer DNA Duplex
分子名称: (11aS)-7-methoxy-8-(3-{4-[6-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]phenoxy}propoxy)-1,2,3,10,11,11a-hexahydro-5H-pyrrolo[2,1-c][1,4]benzodiazepin-5-one, 5'-D(*AP*AP*CP*AP*AP*TP*TP*GP*TP*T)-3'
著者Rettig, M, Weingarth, M, Langel, W, Kamal, A, Kumar, P.P, Weisz, K.
登録日2010-02-08
公開日2010-03-09
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of a covalently bound pyrrolo[2,1-c][1,4]benzodiazepine-benzimidazole hybrid to a 10mer DNA duplex.
Biochemistry, 48, 2009
8ABD
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BU of 8abd by Molmil
Solution structure of Phen-DC3 intercalating into a quadruplex-duplex hybrid
分子名称: DNA (36-MER), N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide
著者Vianney, Y.M, Weisz, K.
登録日2022-07-04
公開日2022-11-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献High-affinity binding at quadruplex-duplex junctions: rather the rule than the exception.
Nucleic Acids Res., 50, 2022
8ABN
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BU of 8abn by Molmil
Solution structure of a phenyl-indoloquinoline intercalating into a quadruplex-duplex hybrid
分子名称: DNA (27-MER), diethyl-[3-[[4-(4,5,9-trimethyl-10H-indolo[3,2-b]quinolin-5-ium-11-yl)phenyl]carbonylamino]propyl]azanium
著者Vianney, Y.M, Weisz, K.
登録日2022-07-04
公開日2022-11-16
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献High-affinity binding at quadruplex-duplex junctions: rather the rule than the exception.
Nucleic Acids Res., 50, 2022
6RS3
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BU of 6rs3 by Molmil
2'-F-riboguanosine modified G-quadruplex with V-loop
分子名称: F1415
著者Haase, L, Weisz, K.
登録日2019-05-21
公開日2019-11-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Sugar Puckering Drives G-Quadruplex Refolding: Implications for V-Shaped Loops.
Chemistry, 26, 2020
6ERL
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BU of 6erl by Molmil
Quadruplex with flipped tetrad formed by the c-myc promoter sequence
分子名称: cmbr-481317
著者Karg, B, Weisz, K.
登録日2017-10-18
公開日2018-06-13
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Loop Length Affects Syn-Anti Conformational Rearrangements in Parallel G-Quadruplexes.
Chemistry, 2018
3GFP
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BU of 3gfp by Molmil
Structure of the C-terminal domain of the DEAD-box protein Dbp5
分子名称: DEAD box protein 5
著者Erzberger, J.P, Dossani, Z.Y, Weirich, C.S, Weis, K, Berger, J.M.
登録日2009-02-27
公開日2009-09-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the C-terminus of the mRNA export factor Dbp5 reveals the interaction surface for the ATPase activator Gle1
Proc.Natl.Acad.Sci.USA, 106, 2009
4PL0
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BU of 4pl0 by Molmil
Crystal structure of the antibacterial peptide ABC transporter McjD in an outward occluded state
分子名称: MAGNESIUM ION, Microcin-J25 export ATP-binding/permease protein McjD, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Choudhury, H.G, Beis, K.
登録日2014-05-15
公開日2014-06-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of an antibacterial peptide ATP-binding cassette transporter in a novel outward occluded state.
Proc.Natl.Acad.Sci.USA, 111, 2014
6F4Z
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BU of 6f4z by Molmil
2'F-araG modified quadruplex with flipped G-tract and central tetrad
分子名称: DNA (5'-D(*GP*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*GP*(GFL)P*GP*GP*AP*CP*GP*GP*G)-3')
著者Dickerhoff, J, Weisz, K.
登録日2017-11-30
公開日2018-04-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Fluorine-Mediated Editing of a G-Quadruplex Folding Pathway.
Chembiochem, 19, 2018
6FFR
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BU of 6ffr by Molmil
DNA-RNA Hybrid Quadruplex with Flipped Tetrad
分子名称: DNA/RNA (5'-R(*G)-D(P*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*GP*AP*C)-R(P*G)-D(P*GP*G)-3')
著者Haase, L, Dickerhoff, J, Weisz, K.
登録日2018-01-09
公開日2018-09-26
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献DNA-RNA Hybrid Quadruplexes Reveal Interactions that Favor RNA Parallel Topologies.
Chemistry, 24, 2018

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件を2024-08-07に公開中

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