Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1JL2
DownloadVisualize
BU of 1jl2 by Molmil
Crystal structure of TCEO RNase H-a chimera combining the folding core from T. thermophilus RNase H and the remaining region of E. coli RNase H
分子名称: Chimera of Ribonuclease HI, Ribonuclease H
著者Robic, S, Berger, J.M, Marqusee, S.
登録日2001-07-13
公開日2002-01-18
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Contributions of folding cores to the thermostabilities of two ribonucleases H.
Protein Sci., 11, 2002
1MU5
DownloadVisualize
BU of 1mu5 by Molmil
Structure of topoisomerase subunit
分子名称: CALCIUM ION, Type II DNA topoisomerase VI Subunit B
著者Corbett, K.D, Berger, J.M.
登録日2002-09-23
公開日2003-01-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the topoisomerase VI-B subunit: implications for type II topoisomerase mechanism and evolution
Embo J., 22, 2003
1MX0
DownloadVisualize
BU of 1mx0 by Molmil
Structure of topoisomerase subunit
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SODIUM ION, ...
著者Corbett, K.D, Berger, J.M.
登録日2002-10-01
公開日2003-01-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the topoisomerase VI-B subunit: implications for type II topoisomerase mechanism and evolution
Embo J., 22, 2003
1L6Z
DownloadVisualize
BU of 1l6z by Molmil
CRYSTAL STRUCTURE OF MURINE CEACAM1A[1,4]: A CORONAVIRUS RECEPTOR AND CELL ADHESION MOLECULE IN THE CEA FAMILY
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, biliary glycoprotein C
著者Tan, K, Zelus, B.D, Meijers, R, Liu, J.-H, Bergelson, J.M, Duke, N, Zhang, R, Joachimiak, A, Holmes, K.V, Wang, J.-H.
登録日2002-03-14
公開日2002-09-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.32 Å)
主引用文献CRYSTAL STRUCTURE OF MURINE sCEACAM1a[1,4]: A CORONAVIRUS RECEPTOR IN THE CEA FAMILY
Embo J., 21, 2002
3HVD
DownloadVisualize
BU of 3hvd by Molmil
The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes
分子名称: CALCIUM ION, Protective antigen
著者Kintzer, A.F, Dong, K.C, Berger, J.M, Krantz, B.A.
登録日2009-06-15
公開日2009-08-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.209 Å)
主引用文献The protective antigen component of anthrax toxin forms functional octameric complexes.
J.Mol.Biol., 392, 2009
3ICE
DownloadVisualize
BU of 3ice by Molmil
Rho transcription termination factor bound to RNA and ADP-BeF3
分子名称: 5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3', ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
著者Thomsen, N.D, Berger, J.M.
登録日2009-07-17
公開日2009-11-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Running in reverse: the structural basis for translocation polarity in hexameric helicases.
Cell(Cambridge,Mass.), 139, 2009
437D
DownloadVisualize
BU of 437d by Molmil
CRYSTAL STRUCTURE OF AN RNA PSEUDOKNOT FROM BEET WESTERN YELLOW VIRUS INVOLVED IN RIBOSOMAL FRAMESHIFTING
分子名称: MAGNESIUM ION, RNA PSEUDOKNOT, SODIUM ION
著者Su, L, Chen, L, Egli, M, Berger, J.M, Rich, A.
登録日1998-11-24
公開日1998-12-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot.
Nat.Struct.Biol., 6, 1999
3IBP
DownloadVisualize
BU of 3ibp by Molmil
The Crystal Structure of the Dimerization Domain of Escherichia coli Structural Maintenance of Chromosomes Protein MukB
分子名称: AMMONIUM ION, Chromosome partition protein mukB
著者Li, Y, Schoeffler, A.J, Berger, J.M, Oakley, M.G.
登録日2009-07-16
公開日2010-01-26
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (3.099 Å)
主引用文献The crystal structure of the hinge domain of the Escherichia coli structural maintenance of chromosomes protein MukB.
J.Mol.Biol., 395, 2010
3ILW
DownloadVisualize
BU of 3ilw by Molmil
Structure of DNA gyrase subunit A N-terminal domain
分子名称: DNA gyrase subunit A, GLYCEROL
著者Tretter, E.M, Schoeffler, A.J, Weisfield, S.R, Berger, J.M, TB Structural Genomics Consortium (TBSGC)
登録日2009-08-07
公開日2009-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.603 Å)
主引用文献Crystal structure of the DNA gyrase GyrA N-terminal domain from Mycobacterium tuberculosis.
Proteins, 78, 2010
1TOE
DownloadVisualize
BU of 1toe by Molmil
Unliganded structure of Hexamutant + A293D mutant of E. coli aspartate aminotransferase
分子名称: Aspartate aminotransferase, SULFATE ION
著者Chow, M.A, McElroy, K.E, Corbett, K.D, Berger, J.M, Kirsch, J.F.
登録日2004-06-14
公開日2004-10-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Narrowing substrate specificity in a directly evolved enzyme: the A293D mutant of aspartate aminotransferase
Biochemistry, 43, 2004
2OXV
DownloadVisualize
BU of 2oxv by Molmil
Structure of the A138T promiscuous mutant of the EcoRI restriction endonuclease bound to its cognate recognition site.
分子名称: DNA (5'-D(*TP*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), Type II restriction enzyme EcoRI
著者Sapienza, P.J, Rosenberg, J.M, Jen-Jacobson, L.
登録日2007-02-21
公開日2007-10-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural and thermodynamic basis for enhanced DNA binding by a promiscuous mutant EcoRI endonuclease.
Structure, 15, 2007
1TUE
DownloadVisualize
BU of 1tue by Molmil
The X-ray Structure of the Papillomavirus Helicase in Complex with its Molecular Matchmaker E2
分子名称: Regulatory protein E2, Replication protein E1
著者Abbate, E.A, Berger, J.M, Botchan, M.R.
登録日2004-06-24
公開日2004-08-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The X-ray structure of the papillomavirus helicase in complex with its molecular matchmaker E2
Genes Dev., 18, 2004
1TOG
DownloadVisualize
BU of 1tog by Molmil
Hydrocinnamic acid-bound structure of SRHEPT + A293D mutant of E. coli aspartate aminotransferase
分子名称: Aspartate aminotransferase, HYDROCINNAMIC ACID
著者Chow, M.A, McElroy, K.E, Corbett, K.D, Berger, J.M, Kirsch, J.F.
登録日2004-06-14
公開日2004-10-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Narrowing substrate specificity in a directly evolved enzyme: the A293D mutant of aspartate aminotransferase
Biochemistry, 43, 2004
1VS0
DownloadVisualize
BU of 1vs0 by Molmil
Crystal Structure of the Ligase Domain from M. tuberculosis LigD at 2.4A
分子名称: CHLORIDE ION, MAGNESIUM ION, Putative DNA ligase-like protein Rv0938/MT0965, ...
著者Akey, D, Martins, A, Aniukwu, J, Glickman, M.S, Shuman, S, Berger, J.M, TB Structural Genomics Consortium (TBSGC)
登録日2006-01-27
公開日2006-02-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure and Nonhomologous End-joining Function of the Ligase Component of Mycobacterium DNA Ligase D.
J.Biol.Chem., 281, 2006
2Q17
DownloadVisualize
BU of 2q17 by Molmil
Formylglycine Generating Enzyme from Streptomyces coelicolor
分子名称: CALCIUM ION, formylglycine generating enzyme
著者Carlson, B.L, Ballister, E.R, Skordalakes, E, King, D.S, Breidenbach, M.A, Gilmore, S.A, Berger, J.M, Bertozzi, C.R.
登録日2007-05-23
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Function and structure of a prokaryotic formylglycine-generating enzyme.
J.Biol.Chem., 283, 2008
2QBY
DownloadVisualize
BU of 2qby by Molmil
Crystal structure of a heterodimer of Cdc6/Orc1 initiators bound to origin DNA (from S. solfataricus)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 6 homolog 1, Cell division control protein 6 homolog 3, ...
著者Cunningham Dueber, E.L, Corn, J.E, Bell, S.D, Berger, J.M.
登録日2007-06-18
公開日2007-09-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Replication origin recognition and deformation by a heterodimeric archaeal Orc1 complex.
Science, 317, 2007
1TOK
DownloadVisualize
BU of 1tok by Molmil
Maleic acid-bound structure of SRHEPT mutant of E. coli aspartate aminotransferase
分子名称: Aspartate aminotransferase, MALEIC ACID
著者Chow, M.A, McElroy, K.E, Corbett, K.D, Berger, J.M, Kirsch, J.F.
登録日2004-06-14
公開日2004-10-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Narrowing substrate specificity in a directly evolved enzyme: the A293D mutant of aspartate aminotransferase
Biochemistry, 43, 2004
2Q2E
DownloadVisualize
BU of 2q2e by Molmil
Crystal structure of the topoisomerase VI holoenzyme from Methanosarcina mazei
分子名称: Type 2 DNA topoisomerase 6 subunit B, Type II DNA topoisomerase VI subunit A
著者Corbett, K.D, Benedetti, P, Berger, J.M.
登録日2007-05-28
公開日2007-07-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Holoenzyme assembly and ATP-mediated conformational dynamics of topoisomerase VI
Nat.Struct.Mol.Biol., 14, 2007
1TOJ
DownloadVisualize
BU of 1toj by Molmil
Hydrocinnamic acid-bound structure of SRHEPT mutant of E. coli aspartate aminotransferase
分子名称: Aspartate aminotransferase, HYDROCINNAMIC ACID
著者Chow, M.A, McElroy, K.E, Corbett, K.D, Berger, J.M, Kirsch, J.F.
登録日2004-06-14
公開日2004-10-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Narrowing substrate specificity in a directly evolved enzyme: the A293D mutant of aspartate aminotransferase
Biochemistry, 43, 2004
1TOI
DownloadVisualize
BU of 1toi by Molmil
Hydrocinnamic acid-bound structure of Hexamutant + A293D mutant of E. coli aspartate aminotransferase
分子名称: Aspartate aminotransferase, HYDROCINNAMIC ACID
著者Chow, M.A, McElroy, K.E, Corbett, K.D, Berger, J.M, Kirsch, J.F.
登録日2004-06-14
公開日2004-10-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Narrowing substrate specificity in a directly evolved enzyme: the A293D mutant of aspartate aminotransferase
Biochemistry, 43, 2004
1XPR
DownloadVisualize
BU of 1xpr by Molmil
Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)
分子名称: 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3', 5A-FORMYLBICYCLOMYCIN, MAGNESIUM ION, ...
著者Skordalakes, E, Brogan, A.P, Park, B.S, Kohn, H, Berger, J.M.
登録日2004-10-09
公開日2004-11-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural mechanism of inhibition of the rho transcription termination factor by the antibiotic bicyclomycin
Structure, 13, 2005
2RGR
DownloadVisualize
BU of 2rgr by Molmil
Topoisomerase IIA bound to G-segment DNA
分子名称: DNA, DNA topoisomerase 2, MAGNESIUM ION
著者Dong, K.C, Berger, J.M.
登録日2007-10-04
公開日2007-12-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for gate-DNA recognition and bending by type IIA topoisomerases.
Nature, 450, 2007
1XPU
DownloadVisualize
BU of 1xpu by Molmil
Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)
分子名称: 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3', 5A-(3-FORMYLPHENYLSULFANYL)-DIHYDROBICYCLOMYCIN, MAGNESIUM ION, ...
著者Skordalakes, E, Brogan, A.P, Park, B.S, Kohn, H, Berger, J.M.
登録日2004-10-09
公開日2004-11-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural mechanism of inhibition of the rho transcription termination factor by the antibiotic bicyclomycin
Structure, 13, 2005
1XPO
DownloadVisualize
BU of 1xpo by Molmil
Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin
分子名称: 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3', BICYCLOMYCIN, MAGNESIUM ION, ...
著者Skordalakes, E, Brogan, A.P, Park, B.S, Kohn, H, Berger, J.M.
登録日2004-10-09
公開日2005-02-08
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural mechanism of inhibition of the rho transcription termination factor by the antibiotic bicyclomycin
Structure, 13, 2005
1QC9
DownloadVisualize
BU of 1qc9 by Molmil
THE CRYSTALLOGRAPHIC STRUCTURE OF RESTRICTION ENDONUCLEASE ECO RI AT 3.3 A IN THE ABSENSE OF DNA
分子名称: PROTEIN (ECO RI ENDONUCLEASE)
著者Chandrasekhar, K, Horvath, M.M, Samudzi, C, Choi, J, Rosenberg, J.M.
登録日1999-05-18
公開日1999-06-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The 3.3 A Crystallographic Structure of Restriction Endonuclease Eco RI in the Absence of DNA
To be Published

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon