Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5YAE
DownloadVisualize
BU of 5yae by Molmil
Ferulic acid esterase from Streptomyces cinnamoneus at 2.4 A resolution
分子名称: ACETATE ION, Esterase, SULFATE ION
著者Tamura, H, Uraji, M, Mizohata, E, Ogawa, K, Inoue, T, Hatanaka, T.
登録日2017-08-31
公開日2017-12-06
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Loop of Streptomyces Feruloyl Esterase Plays an Important Role in the Enzyme's Catalyzing the Release of Ferulic Acid from Biomass.
Appl. Environ. Microbiol., 84, 2018
5YTL
DownloadVisualize
BU of 5ytl by Molmil
Crystal structure of Geobacillus thermodenitrificans copper-containing nitrite reductase determined with an anaerobically manipulated crystal
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, ...
著者Fukuda, Y, Matsusaki, T, Tse, K.M, Mizohata, E, Murphy, M.E.P, Inoue, T.
登録日2017-11-19
公開日2018-08-22
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献Crystallographic study of dioxygen chemistry in a copper-containing nitrite reductase from Geobacillus thermodenitrificans.
Acta Crystallogr D Struct Biol, 74, 2018
5YAL
DownloadVisualize
BU of 5yal by Molmil
Ferulic acid esterase from Streptomyces cinnamoneus at 1.5 A resolution
分子名称: ACETATE ION, Esterase, GLYCEROL, ...
著者Tamura, H, Uraji, M, Mizohata, E, Ogawa, K, Inoue, T, Hatanaka, T.
登録日2017-09-01
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Loop of Streptomyces Feruloyl Esterase Plays an Important Role in the Enzyme's Catalyzing the Release of Ferulic Acid from Biomass.
Appl. Environ. Microbiol., 84, 2018
5YTN
DownloadVisualize
BU of 5ytn by Molmil
C135A mutant of copper-containing nitrite reductase from Geobacillus thermodenitrificans in complex with peroxide
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, COPPER (II) ION, Copper-containing nitrite reductase, ...
著者Fukuda, Y, Matsusaki, T, Tse, K.M, Mizohata, E, Murphy, M.E.P, Inoue, T.
登録日2017-11-19
公開日2018-08-22
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystallographic study of dioxygen chemistry in a copper-containing nitrite reductase from Geobacillus thermodenitrificans.
Acta Crystallogr D Struct Biol, 74, 2018
5YTM
DownloadVisualize
BU of 5ytm by Molmil
C135A mutant of copper-containing nitrite reductase from Geobacillus thermodenitrificans determined by in-ouse source
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, ACETIC ACID, COPPER (II) ION, ...
著者Fukuda, Y, Matsusaki, T, Tse, K.M, Mizohata, E, Murphy, M.E.P, Inoue, T.
登録日2017-11-19
公開日2018-08-22
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystallographic study of dioxygen chemistry in a copper-containing nitrite reductase from Geobacillus thermodenitrificans.
Acta Crystallogr D Struct Biol, 74, 2018
7VEL
DownloadVisualize
BU of 7vel by Molmil
Crystal structure of Phytolacca americana UGT3 with UDP-2fluoroglucose
分子名称: 1,2-ETHANEDIOL, 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, Glycosyltransferase, ...
著者Maharjan, R, Fukuda, Y, Nakayama, T, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
登録日2021-09-09
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for substrate recognition in the Phytolacca americana glycosyltransferase PaGT3.
Acta Crystallogr D Struct Biol, 78, 2022
7VEK
DownloadVisualize
BU of 7vek by Molmil
Crystal structure of Phytolacca americana UGT3 with capsaicin and UDP-2fluoroglucose
分子名称: (6E)-N-(4-hydroxy-3-methoxybenzyl)-8-methylnon-6-enamide, 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, Glycosyltransferase, ...
著者Maharjan, R, Fukuda, Y, Nakayama, T, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
登録日2021-09-09
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for substrate recognition in the Phytolacca americana glycosyltransferase PaGT3.
Acta Crystallogr D Struct Biol, 78, 2022
7VEJ
DownloadVisualize
BU of 7vej by Molmil
Crystal structure of Phytolacca americana UGT3 with kaempferol and UDP-2fluoroglucose
分子名称: 1,2-ETHANEDIOL, 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, 3,5,7-TRIHYDROXY-2-(4-HYDROXYPHENYL)-4H-CHROMEN-4-ONE, ...
著者Maharjan, R, Fukuda, Y, Nakayama, T, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
登録日2021-09-09
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for substrate recognition in the Phytolacca americana glycosyltransferase PaGT3.
Acta Crystallogr D Struct Biol, 78, 2022
1IR1
DownloadVisualize
BU of 1ir1 by Molmil
Crystal Structure of Spinach Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase (Rubisco) Complexed with CO2, Mg2+ and 2-Carboxyarabinitol-1,5-Bisphosphate
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, Large subunit of Rubisco, MAGNESIUM ION, ...
著者Mizohata, E, Matsumura, H, Okano, Y, Kumei, M, Takuma, H, Onodera, J, Kato, K, Shibata, N, Inoue, T, Yokota, A, Kai, Y.
登録日2001-08-31
公開日2002-03-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of activated ribulose-1,5-bisphosphate carboxylase/oxygenase from green alga Chlamydomonas reinhardtii complexed with 2-carboxyarabinitol-1,5-bisphosphate.
J.Mol.Biol., 316, 2002
1IR2
DownloadVisualize
BU of 1ir2 by Molmil
Crystal Structure of Activated Ribulose-1,5-bisphosphate Carboxylase/oxygenase (Rubisco) from Green alga, Chlamydomonas reinhardtii Complexed with 2-Carboxyarabinitol-1,5-bisphosphate (2-CABP)
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, GLYCEROL, Large subunit of Rubisco, ...
著者Mizohata, E, Matsumura, H, Okano, Y, Kumei, M, Takuma, H, Onodera, J, Kato, K, Shibata, N, Inoue, T, Yokota, A, Kai, Y.
登録日2001-09-03
公開日2002-03-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Crystal structure of activated ribulose-1,5-bisphosphate carboxylase/oxygenase from green alga Chlamydomonas reinhardtii complexed with 2-carboxyarabinitol-1,5-bisphosphate.
J.Mol.Biol., 316, 2002
1IWA
DownloadVisualize
BU of 1iwa by Molmil
RUBISCO FROM GALDIERIA PARTITA
分子名称: SULFATE ION, ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
著者Okano, Y, Mizohata, E, Xie, Y, Matsumura, H, Sugawara, H, Inoue, T, Yokota, A, Kai, Y.
登録日2002-04-30
公開日2003-04-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献X-Ray Structure of Galdieria Rubisco Complexed with one sulfate ion per active site
FEBS LETT., 527, 2002
1KS9
DownloadVisualize
BU of 1ks9 by Molmil
Ketopantoate Reductase from Escherichia coli
分子名称: 2-DEHYDROPANTOATE 2-REDUCTASE
著者Matak-Vinkovic, D, Vinkovic, M, Saldanha, S.A, Ashurst, J.A, von Delft, F, Inoue, T, Miguel, R.N, Smith, A.G, Blundell, T.L, Abell, C.
登録日2002-01-11
公開日2002-01-25
最終更新日2014-11-12
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of Escherichia coli ketopantoate reductase at 1.7 A resolution and insight into the enzyme mechanism.
Biochemistry, 40, 2001
7X6H
DownloadVisualize
BU of 7x6h by Molmil
Outer membrane lipoprotein QseG of Escherichia coli O157:H7
分子名称: Quorum-sensing regulator protein G
著者Matsumoto, K, Fukuda, Y, Inoue, T.
登録日2022-03-07
公開日2023-03-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of QseE and QseG: elements of a three-component system from Escherichia coli.
Acta Crystallogr.,Sect.F, 79, 2023
7X6F
DownloadVisualize
BU of 7x6f by Molmil
Outer membrane lipoprotein QseG of Escherichia coli O157:H7
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CITRATE ANION, ...
著者Matsumoto, K, Fukuda, Y, Inoue, T.
登録日2022-03-07
公開日2023-03-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of QseE and QseG: elements of a three-component system from Escherichia coli.
Acta Crystallogr.,Sect.F, 79, 2023
7X6G
DownloadVisualize
BU of 7x6g by Molmil
Outer membrane lipoprotein QseG of Escherichia coli O157:H7
分子名称: Quorum-sensing regulator protein G
著者Matsumoto, K, Fukuda, Y, Inoue, T.
登録日2022-03-07
公開日2023-03-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structures of QseE and QseG: elements of a three-component system from Escherichia coli.
Acta Crystallogr.,Sect.F, 79, 2023
1M3U
DownloadVisualize
BU of 1m3u by Molmil
Crystal Structure of Ketopantoate Hydroxymethyltransferase complexed the Product Ketopantoate
分子名称: 3-methyl-2-oxobutanoate hydroxymethyltransferase, KETOPANTOATE, MAGNESIUM ION
著者von Delft, F, Inoue, T, Saldanha, S.A, Ottenhof, H.H, Dhanaraj, V, Witty, M, Abell, C, Smith, A.G, Blundell, T.L.
登録日2002-06-30
公開日2003-07-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of E. coli Ketopantoate Hydroxymethyl Transferase Complexed with Ketopantoate and Mg(2+), Solved by Locating 160 Selenomethionine Sites.
Structure, 11, 2003
5XDU
DownloadVisualize
BU of 5xdu by Molmil
Staphylococcus aureus FtsZ 12-316 complexed with TXA6101
分子名称: 3-[[5-bromanyl-4-[4-(trifluoromethyl)phenyl]-1,3-oxazol-2-yl]methoxy]-2,6-bis(fluoranyl)benzamide, CALCIUM ION, Cell division protein FtsZ, ...
著者Fujita, J, Maeda, Y, Mizohata, E, Inoue, T, Kaul, M, Parhi, A.K, LaVoie, E.J, Pilch, D.S, Matsumura, H.
登録日2017-03-30
公開日2017-08-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Flexibility of an Inhibitor Overcomes Drug Resistance Mutations in Staphylococcus aureus FtsZ
ACS Chem. Biol., 12, 2017
5XDV
DownloadVisualize
BU of 5xdv by Molmil
Staphylococcus aureus FtsZ 12-316 G196S complexed with TXA6101
分子名称: 3-[[5-bromanyl-4-[4-(trifluoromethyl)phenyl]-1,3-oxazol-2-yl]methoxy]-2,6-bis(fluoranyl)benzamide, CALCIUM ION, Cell division protein FtsZ, ...
著者Fujita, J, Maeda, Y, Mizohata, E, Inoue, T, Kaul, M, Parhi, A.K, LaVoie, E.J, Pilch, D.S, Matsumura, H.
登録日2017-03-30
公開日2017-08-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Flexibility of an Inhibitor Overcomes Drug Resistance Mutations in Staphylococcus aureus FtsZ
ACS Chem. Biol., 12, 2017
5XDT
DownloadVisualize
BU of 5xdt by Molmil
Staphylococcus aureus FtsZ 12-316 complexed with TXA707
分子名称: 1-methylpyrrolidin-2-one, 2,6-bis(fluoranyl)-3-[[6-(trifluoromethyl)-[1,3]thiazolo[5,4-b]pyridin-2-yl]methoxy]benzamide, CALCIUM ION, ...
著者Fujita, J, Maeda, Y, Mizohata, E, Inoue, T, Kaul, M, Parhi, A.K, LaVoie, E.J, Pilch, D.S, Matsumura, H.
登録日2017-03-30
公開日2017-08-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural Flexibility of an Inhibitor Overcomes Drug Resistance Mutations in Staphylococcus aureus FtsZ
ACS Chem. Biol., 12, 2017
5XN9
DownloadVisualize
BU of 5xn9 by Molmil
Crystal structure of a secretary abundant heat soluble (SAHS) protein from Ramazzottius varieornatus (from monomer sample)
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
著者Fukuda, Y, Miura, Y, Mizohata, E, Inoue, T.
登録日2017-05-19
公開日2017-07-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.449 Å)
主引用文献Structural insights into a secretory abundant heat-soluble protein from an anhydrobiotic tardigrade, Ramazzottius varieornatus
FEBS Lett., 591, 2017
5XDW
DownloadVisualize
BU of 5xdw by Molmil
Staphylococcus aureus FtsZ 12-316 G196S
分子名称: CALCIUM ION, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Fujita, J, Maeda, Y, Mizohata, E, Inoue, T, Kaul, M, Parhi, A.K, LaVoie, E.J, Pilch, D.S, Matsumura, H.
登録日2017-03-30
公開日2017-08-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Flexibility of an Inhibitor Overcomes Drug Resistance Mutations in Staphylococcus aureus FtsZ
ACS Chem. Biol., 12, 2017
5XNA
DownloadVisualize
BU of 5xna by Molmil
Crystal structure of a secretary abundant heat soluble (SAHS) protein from Ramazzottius varieornatus (from dimer sample)
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
著者Fukuda, Y, Miura, Y, Mizohata, E, Inoue, T.
登録日2017-05-19
公開日2017-07-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Structural insights into a secretory abundant heat-soluble protein from an anhydrobiotic tardigrade, Ramazzottius varieornatus
FEBS Lett., 591, 2017
5ZIQ
DownloadVisualize
BU of 5ziq by Molmil
Crystal structure of hexacoordinated heme protein from anhydrobiotic tardigrade at pH 4
分子名称: 1,2-ETHANEDIOL, Globin protein, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Kim, J, Fukuda, Y, Inoue, T.
登録日2018-03-16
公開日2019-01-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of Kumaglobin: a hexacoordinated heme protein from an anhydrobiotic tardigrade, Ramazzottius varieornatus.
FEBS J., 286, 2019
5ZM9
DownloadVisualize
BU of 5zm9 by Molmil
Crystal structure of hexacoordinated heme protein from anhydrobiotic tardigrade at pH 7
分子名称: CHLORIDE ION, Globin Protein, PROTOPORPHYRIN IX CONTAINING FE
著者Kim, J, Fukuda, Y, Inoue, T.
登録日2018-04-02
公開日2019-01-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Kumaglobin: a hexacoordinated heme protein from an anhydrobiotic tardigrade, Ramazzottius varieornatus.
FEBS J., 286, 2019
5X31
DownloadVisualize
BU of 5x31 by Molmil
Pseudoazurin from Alcaligenes faecalis (space group P65)
分子名称: COPPER (II) ION, Pseudoazurin
著者Fukuda, Y, Mizohata, E, Inoue, T.
登録日2017-02-03
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献New molecular packing in a crystal of pseudoazurin from Alcaligenes faecalis: a double-helical arrangement of blue copper
Acta Crystallogr F Struct Biol Commun, 73, 2017

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon