Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6SGR
DownloadVisualize
BU of 6sgr by Molmil
Cryo-EM structure of Escherichia coli AcrBZ and DARPin in Saposin A-nanodisc with cardiolipin
分子名称: DARPin, Multidrug efflux pump accessory protein AcrZ, Multidrug efflux pump subunit AcrB
著者Szewczak-Harris, A, Du, D, Newman, C, Neuberger, A, Luisi, B.F.
登録日2019-08-05
公開日2020-05-13
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Interactions of a Bacterial RND Transporter with a Transmembrane Small Protein in a Lipid Environment.
Structure, 28, 2020
4QCJ
DownloadVisualize
BU of 4qcj by Molmil
Crystal Structure of OdhI from Corynebacterium glutamicum
分子名称: Oxoglutarate dehydrogenase inhibitor
著者Labahn, J, Raasch, K, Eggeling, L, Bocola, M, Leitner, A, Bott, M.
登録日2014-05-12
公開日2014-07-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Interaction of 2-oxoglutarate dehydrogenase OdhA with its inhibitor OdhI in Corynebacterium glutamicum: Mutants and a model.
J.Biotechnol., 191, 2014
2BH7
DownloadVisualize
BU of 2bh7 by Molmil
Crystal structure of a SeMet derivative of AmiD at 2.2 angstroms
分子名称: N-ACETYLMURAMOYL-L-ALANINE AMIDASE, SULFATE ION, ZINC ION
著者Petrella, S, Herman, R, Sauvage, E, Genereux, C, Pennartz, A, Joris, B, Charlier, P.
登録日2005-01-07
公開日2006-06-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Specific Structural Features of the N-Acetylmuramoyl-L-Alanine Amidase Amid from Escherichia Coli and Mechanistic Implications for Enzymes of This Family.
J.Mol.Biol., 397, 2010
3WOB
DownloadVisualize
BU of 3wob by Molmil
Crystal structure of a prostate-specific WGA16 glycoprotein lectin, form I
分子名称: hypothetical protein
著者Garenaux, E, Kanagawa, M, Tsuchiyama, T, Hori, K, Kanazawa, T, Goshima, A, Chiba, M, Yasue, H, Ikeda, A, Yamaguchi, Y, Sato, C, Kitajima, K.
登録日2013-12-26
公開日2014-12-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Discovery, Primary, and Crystal Structures and Capacitation-related Properties of a Prostate-derived Heparin-binding Protein WGA16 from Boar Sperm
J.Biol.Chem., 290, 2015
1S0I
DownloadVisualize
BU of 1s0i by Molmil
Trypanosoma cruzi trans-sialidase in complex with sialyl-lactose (Michaelis complex)
分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, trans-sialidase
著者Amaya, M.F, Watts, A.G, Damager, I, Wehenkel, A, Nguyen, T, Buschiazzo, A, Paris, G, Frasch, A.C, Withers, S.G, Alzari, P.M.
登録日2003-12-31
公開日2004-05-18
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Insights into the Catalytic Mechanism of Trypanosoma cruzi trans-Sialidase.
Structure, 12, 2004
4E94
DownloadVisualize
BU of 4e94 by Molmil
Crystal structure of MccF-like protein from Streptococcus pneumoniae
分子名称: GLYCEROL, MccC family protein, SULFATE ION
著者Nocek, B, Tikhonov, A, Kwon, K, Severinov, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-03-20
公開日2012-05-09
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.651 Å)
主引用文献Crystal structure of MccF-like protein from Streptococcus pneumoniae
TO BE PUBLISHED
3WRI
DownloadVisualize
BU of 3wri by Molmil
Crystal structure of P450cam
分子名称: CAMPHOR, Camphor 5-monooxygenase, PROTOPORPHYRIN IX CONTAINING FE
著者Kishimoto, A, Takagi, K, Amano, A, Sakurai, K, Mizushima, T, Shimada, H.
登録日2014-02-25
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of P450cam intermediate
To be Published
3WDL
DownloadVisualize
BU of 3wdl by Molmil
Crystal structure of 4-phosphopantoate-beta-alanine ligase complexed with ATP
分子名称: 4-phosphopantoate--beta-alanine ligase, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
著者Kishimoto, A, Kita, A, Ishibashi, T, Tomita, H, Yokooji, Y, Imanaka, T, Atomi, H, Miki, K.
登録日2013-06-19
公開日2014-04-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of phosphopantothenate synthetase from Thermococcus kodakarensis
Proteins, 82, 2014
4EB4
DownloadVisualize
BU of 4eb4 by Molmil
Crystal structure of mouse thymidylate synthase in ternary complex with dUMP and Tomudex
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
著者Dowiercial, A, Jarmula, A, Rypniewski, W.R, Wilk, P, Rode, W.
登録日2012-03-23
公開日2012-05-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal structure of mouse thymidylate synthase in tertiary complex with dUMP and raltitrexed reveals N-terminus architecture and two different active site conformations.
Biomed Res Int, 2014, 2014
3W7S
DownloadVisualize
BU of 3w7s by Molmil
Escherichia coli K12 YgjK complexed with glucose
分子名称: CALCIUM ION, Uncharacterized protein YgjK, alpha-D-glucopyranose
著者Miyazaki, T, Kurakata, Y, Uechi, A, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T.
登録日2013-03-06
公開日2013-04-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63.
J.Mol.Biol., 381, 2008
2JDM
DownloadVisualize
BU of 2jdm by Molmil
Mutant (S22A) of Pseudomonas aeruginosa lectin II (PA-IIL) complexed with methyl-a-L-fucopyranoside
分子名称: CALCIUM ION, FUCOSE-BINDING LECTIN PA-IIL, SULFATE ION, ...
著者Adam, J, Pokorna, M, Sabin, C, Mitchell, E.P, Imberty, A, Wimmerova, M.
登録日2007-01-11
公開日2007-06-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Engineering of Pa-Iil Lectin from Pseudomonas Aeruginosa - Unravelling the Role of the Specificity Loop for Sugar Preference.
Bmc Struct.Biol., 7, 2007
4EOR
DownloadVisualize
BU of 4eor by Molmil
Thr 160 phosphorylated CDK2 WT - human cyclin A3 complex with the inhibitor NU6102
分子名称: Cyclin-A2, Cyclin-dependent kinase 2, O6-CYCLOHEXYLMETHOXY-2-(4'-SULPHAMOYLANILINO) PURINE
著者Echalier, A, Cot, E, Camasses, A, Hodimont, E, Hoh, F, Sheinerman, F, Krasinska, L, Fisher, D.
登録日2012-04-14
公開日2013-02-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献An integrated chemical biology approach provides insight into Cdk2 functional redundancy and inhibitor sensitivity.
Chem.Biol., 19, 2012
1OZ1
DownloadVisualize
BU of 1oz1 by Molmil
P38 MITOGEN-ACTIVATED KINASE IN COMPLEX WITH 4-AZAINDOLE INHIBITOR
分子名称: 3-(4-FLUOROPHENYL)-2-PYRIDIN-4-YL-1H-PYRROLO[3,2-B]PYRIDIN-1-OL, Mitogen-activated protein kinase 14
著者Lovejoy, B, Villasenor, A, Browner, M, Dunten, P.
登録日2003-04-07
公開日2003-09-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Design and synthesis of 4-azaindoles as inhibitors of p38 MAP kinase.
J.Med.Chem., 46, 2003
6SGU
DownloadVisualize
BU of 6sgu by Molmil
Cryo-EM structure of Escherichia coli AcrB and DARPin in Saposin A-nanodisc
分子名称: DARPin, Multidrug efflux pump subunit AcrB
著者Szewczak-Harris, A, Du, D, Newman, C, Neuberger, A, Luisi, B.F.
登録日2019-08-05
公開日2020-05-13
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Interactions of a Bacterial RND Transporter with a Transmembrane Small Protein in a Lipid Environment.
Structure, 28, 2020
1RER
DownloadVisualize
BU of 1rer by Molmil
Crystal structure of the homotrimer of fusion glycoprotein E1 from Semliki Forest Virus.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gibbons, D.L, Vaney, M.C, Roussel, A, Vigouroux, A, Reilly, B, Kielian, M, Rey, F.A.
登録日2003-11-07
公開日2004-01-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Conformational change and protein-protein interactions of the fusion protein of Semliki Forest virus.
Nature, 427, 2004
4EON
DownloadVisualize
BU of 4eon by Molmil
Thr 160 phosphorylated CDK2 H84S, Q85M, Q131E - human cyclin A3 complex with the inhibitor RO3306
分子名称: (5E)-5-(quinolin-6-ylmethylidene)-2-[(thiophen-2-ylmethyl)amino]-1,3-thiazol-4(5H)-one, Cyclin-A2, Cyclin-dependent kinase 2, ...
著者Echalier, A, Cot, E, Camasses, A, Hodimont, E, Hoh, F, Sheinerman, F, Krasinska, L, Fisher, D.
登録日2012-04-14
公開日2013-02-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献An integrated chemical biology approach provides insight into Cdk2 functional redundancy and inhibitor sensitivity.
Chem.Biol., 19, 2012
6S8V
DownloadVisualize
BU of 6s8v by Molmil
Structure of the high affinity Anticalin P3D11 in complex with the human CD98 heavy chain ectodomain
分子名称: 1,2-ETHANEDIOL, 4F2 cell-surface antigen heavy chain, Neutrophil gelatinase-associated lipocalin
著者Schiefner, A, Deuschle, F.-C, Skerra, A.
登録日2019-07-10
公開日2020-03-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Development of a high affinity Anticalin®directed against human CD98hc for theranostic applications.
Theranostics, 10, 2020
4PVJ
DownloadVisualize
BU of 4pvj by Molmil
Phl p 4 I153V variant, a glucose oxidase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, MALONATE ION, Pollen allergen Phl p 4.0202, ...
著者Zafred, D, Teufelberger, A, Keller, W, Macheroux, P.
登録日2014-03-17
公開日2014-04-02
最終更新日2015-09-02
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Rationally engineered flavin-dependent oxidase reveals steric control of dioxygen reduction.
Febs J., 282, 2015
4E47
DownloadVisualize
BU of 4e47 by Molmil
SET7/9 in complex with inhibitor (R)-(3-(3-cyanophenyl)-1-oxo-1-(pyrrolidin-1-yl)propan-2-yl)-1,2,3,4-tetrahydroisoquinoline-6- sulfonamide and S-adenosylmethionine
分子名称: (R)-(3-(3-cyanophenyl)-1-oxo-1-(pyrrolidin-1-yl)propan-2-yl)-1,2,3,4-tetrahydroisoquinoline-6-sulfonamide, BETA-MERCAPTOETHANOL, Histone-lysine N-methyltransferase SETD7, ...
著者Walker, J.R, Ouyang, H, Dong, A, Fish, P, Cook, A, Barsyte, D, Vedadi, M, Tatlock, J, Owen, D, Bunnage, M, Bountra, C, Weigelt, J, Edwards, A.M, Arrowsmith, C.H, Brown, P.J, Structural Genomics Consortium (SGC)
登録日2012-03-12
公開日2012-03-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Setd7 in Complex with Inhibitor and SAM
To be Published
3WH2
DownloadVisualize
BU of 3wh2 by Molmil
Human Mincle in complex with citrate
分子名称: C-type lectin domain family 4 member E, CALCIUM ION, CITRATE ANION
著者Furukawa, A, Kamishikiryo, J, Mori, D, Toyonaga, K, Okabe, Y, Toji, A, Kanda, R, Miyake, Y, Ose, T, Yamasaki, S, Maenaka, K.
登録日2013-08-21
公開日2013-10-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural analysis for glycolipid recognition by the C-type lectins Mincle and MCL
Proc.Natl.Acad.Sci.USA, 110, 2013
3WMD
DownloadVisualize
BU of 3wmd by Molmil
Crystal structure of epoxide hydrolase MonBI
分子名称: Probable monensin biosynthesis isomerase
著者Minami, A, Ose, T, Sato, K, Oikawa, A, Kuroki, K, Maenaka, K, Oguri, H, Oikawa, H.
登録日2013-11-16
公開日2014-01-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Allosteric regulation of epoxide opening cascades by a pair of epoxide hydrolases in monensin biosynthesis
Acs Chem.Biol., 9, 2014
3WHD
DownloadVisualize
BU of 3whd by Molmil
C-type lectin, human MCL
分子名称: C-type lectin domain family 4 member D, CALCIUM ION
著者Furukawa, A, Kamishikiryo, J, Mori, D, Toyonaga, K, Okabe, Y, Toji, A, Kanda, R, Miyake, Y, Ose, T, Yamasaki, S, Maenaka, K.
登録日2013-08-24
公開日2013-10-23
最終更新日2013-12-11
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structural analysis for glycolipid recognition by the C-type lectins Mincle and MCL
Proc.Natl.Acad.Sci.USA, 110, 2013
4Q0V
DownloadVisualize
BU of 4q0v by Molmil
Crystal structure of Acinetobacter sp. DL28 L-ribose isomerase mutant E204Q in complex with L-ribulose
分子名称: COBALT (II) ION, COBALT HEXAMMINE(III), L-Ribose isomerase, ...
著者Yoshida, H, Yoshihara, A, Teraoka, M, Izumori, K, Kamitori, S.
登録日2014-04-02
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献X-ray structure of a novel L-ribose isomerase acting on a non-natural sugar L-ribose as its ideal substrate.
Febs J., 281, 2014
3WOC
DownloadVisualize
BU of 3woc by Molmil
Crystal structure of a prostate-specific WGA16 glycoprotein lectin, form II
分子名称: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, SULFATE ION, ...
著者Garenaux, E, Kanagawa, M, Tsuchiyama, T, Hori, K, Kanazawa, T, Goshima, A, Chiba, M, Yasue, H, Ikeda, A, Yamaguchi, Y, Sato, C, Kitajima, K.
登録日2013-12-26
公開日2014-12-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Discovery, Primary, and Crystal Structures and Capacitation-related Properties of a Prostate-derived Heparin-binding Protein WGA16 from Boar Sperm
J.Biol.Chem., 290, 2015
6SED
DownloadVisualize
BU of 6sed by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB in complex with galactose
分子名称: ACETATE ION, Beta-galactosidase, FORMIC ACID, ...
著者Rutkiewicz, M, Bujacz, A, Kaminska, P, Bujacz, G.
登録日2019-07-29
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.233 Å)
主引用文献Active Site Architecture and Reaction Mechanism Determination of Cold Adapted beta-d-galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 20, 2019

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon