Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8HDL
DownloadVisualize
BU of 8hdl by Molmil
Crystal structure of ASFV trans geranylgeranyl diphosphate synthase B318L
分子名称: Trans-prenyltransferase
著者Zhao, H.F.
登録日2022-11-04
公開日2023-09-06
実験手法X-RAY DIFFRACTION (3.198 Å)
主引用文献Exploring AlphaFold2's Performance on Predicting Amino Acid Side-Chain Conformations and Its Utility in Crystal Structure Determination of B318L Protein.
Int J Mol Sci, 24, 2023
8HEY
DownloadVisualize
BU of 8hey by Molmil
One CVSC-binding penton vertex in HCMV B-capsid
分子名称: Capsid vertex component 1, Capsid vertex component 2, Major capsid protein, ...
著者Li, Z, Yu, X.
登録日2022-11-09
公開日2023-11-01
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Cryo-electron microscopy structures of capsids and in situ portals of DNA-devoid capsids of human cytomegalovirus.
Nat Commun, 14, 2023
8H69
DownloadVisualize
BU of 8h69 by Molmil
Cryo-EM structure of influenza RNA polymerase
分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-R(*UP*AP*AP*AP*CP*UP*CP*CP*UP*GP*CP*UP*UP*UP*UP*GP*CP*U)-3'), ...
著者Li, H, Wu, Y, Liang, H, Liu, Y.
登録日2022-10-16
公開日2023-06-28
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献An intermediate state allows influenza polymerase to switch smoothly between transcription and replication cycles.
Nat.Struct.Mol.Biol., 30, 2023
8HEX
DownloadVisualize
BU of 8hex by Molmil
C5 portal vertex in HCMV B-capsid
分子名称: Capsid vertex component 1, Capsid vertex component 2, Major capsid protein, ...
著者Li, Z, Yu, X.
登録日2022-11-08
公開日2023-11-01
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-electron microscopy structures of capsids and in situ portals of DNA-devoid capsids of human cytomegalovirus.
Nat Commun, 14, 2023
8HEU
DownloadVisualize
BU of 8heu by Molmil
C12 portal in HCMV A-capsid
分子名称: Portal protein
著者Li, Z, Yu, X.
登録日2022-11-08
公開日2023-04-26
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Cryo-electron microscopy structures of capsids and in situ portals of DNA-devoid capsids of human cytomegalovirus.
Nat Commun, 14, 2023
8HEV
DownloadVisualize
BU of 8hev by Molmil
C12 portal in HCMV B-capsid
分子名称: Portal protein, Unknown peptide
著者Li, Z, Yu, X.
登録日2022-11-08
公開日2023-04-26
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-electron microscopy structures of capsids and in situ portals of DNA-devoid capsids of human cytomegalovirus.
Nat Commun, 14, 2023
7V6Y
DownloadVisualize
BU of 7v6y by Molmil
Cryo-EM structure of Patched in lipid nanodisc - the wildtype, 3.5 angstrom (re-processed with dataset of 7dzq)
分子名称: (2S)-2-azanyl-3-[[(2S)-3-butanoyloxy-2-dec-9-enoyloxy-propoxy]-oxidanyl-phosphoryl]oxy-propanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Luo, Y, Zhao, Y, Qu, Q, Li, D.
登録日2021-08-20
公開日2021-09-22
最終更新日2025-03-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM study of patched in lipid nanodisc suggests a structural basis for its clustering in caveolae.
Structure, 29, 2021
7V6Z
DownloadVisualize
BU of 7v6z by Molmil
Cryo-EM structure of Patched1 (V1084A mutant) in lipid nanodisc, 3.64 angstrom (reprocessed with the dataset of 7dzp)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Luo, Y, Zhao, Y, Qu, Q, Li, D.
登録日2021-08-20
公開日2021-09-22
最終更新日2025-03-19
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Cryo-EM study of patched in lipid nanodisc suggests a structural basis for its clustering in caveolae.
Structure, 29, 2021
7WNM
DownloadVisualize
BU of 7wnm by Molmil
Structure of SARS-CoV-2 Gamma variant receptor-binding domain complexed with high affinity human ACE2 mutant (T27F,R273Q)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike protein S1, ...
著者Ma, R.Y, Han, P.C, Wang, Q.H, Han, P.
登録日2022-01-18
公開日2022-12-21
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A binding-enhanced but enzymatic activity-eliminated human ACE2 efficiently neutralizes SARS-CoV-2 variants.
Signal Transduct Target Ther, 7, 2022
7DTR
DownloadVisualize
BU of 7dtr by Molmil
Structure of an AcrIF protein
分子名称: AcrIF24
著者Yue, F, Peipei, Y.
登録日2021-01-06
公開日2022-01-19
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Insights into the inhibition of type I-F CRISPR-Cas system by a multifunctional anti-CRISPR protein AcrIF24.
Nat Commun, 13, 2022
7ELM
DownloadVisualize
BU of 7elm by Molmil
Structure of Csy-AcrIF24
分子名称: AcrIF24, CRISPR type I-F/YPEST-associated protein Csy2, CRISPR-associated protein Csy3, ...
著者Zhang, L, Feng, Y.
登録日2021-04-12
公開日2022-04-20
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Insights into the inhibition of type I-F CRISPR-Cas system by a multifunctional anti-CRISPR protein AcrIF24.
Nat Commun, 13, 2022
7ELN
DownloadVisualize
BU of 7eln by Molmil
Structure of Csy-AcrIF24-dsDNA
分子名称: 54-MER DNA, AcrIF24, CRISPR type I-F/YPEST-associated protein Csy2, ...
著者Zhang, L, Feng, Y.
登録日2021-04-12
公開日2022-04-20
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Insights into the inhibition of type I-F CRISPR-Cas system by a multifunctional anti-CRISPR protein AcrIF24.
Nat Commun, 13, 2022
1MFG
DownloadVisualize
BU of 1mfg by Molmil
The Structure of ERBIN PDZ domain bound to the Carboxy-terminal tail of the ErbB2 Receptor
分子名称: Erb-B2 INTERACTING PROTEIN, Erb-B2 carboxyl-terminal fragment
著者Birrane, G, Chung, J, Ladias, J.A.
登録日2002-08-10
公開日2003-01-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Novel mode of ligand recognition by the erbin PDZ domain
J.Biol.Chem., 278, 2003
1MFL
DownloadVisualize
BU of 1mfl by Molmil
The Structure of ERBIN PDZ domain bound to the Carboxy-terminal tail of the ErbB2 Receptor
分子名称: Erb-B2 INTERACTING PROTEIN, PHOSPHORYLATED Erb-B2 carboxyl-terminal fragment.
著者Birrane, G, Chung, J, Ladias, J.A.
登録日2002-08-12
公開日2003-01-21
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Novel mode of ligand recognition by the erbin PDZ domain
J.Biol.Chem., 278, 2003
7F26
DownloadVisualize
BU of 7f26 by Molmil
Crystal structure of lysozyme
分子名称: Lysozyme C
著者Liang, M.
登録日2021-06-10
公開日2021-09-15
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Novel combined crystallization plate for high-throughput crystal screening and in situ data collection at a crystallography beamline.
Acta Crystallogr.,Sect.F, 77, 2021
7BPK
DownloadVisualize
BU of 7bpk by Molmil
Zika virus envelope protein mutant bound to mAb
分子名称: Envelope protein, IG c307_light_IGLV1-51_IGLJ2, Z3L1 Heavy chain
著者Dai, L, Qi, J, Gao, G.F.
登録日2020-03-23
公開日2021-03-24
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Protective Zika vaccines engineered to eliminate enhancement of dengue infection via immunodominance switch.
Nat.Immunol., 22, 2021
7BQ5
DownloadVisualize
BU of 7bq5 by Molmil
ZIKV sE bound to mAb Z6
分子名称: Z6 Light Chain, Z6 heavy chain, envelope protein
著者Dai, L, Qi, J, Gao, G.F.
登録日2020-03-24
公開日2021-03-24
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Protective Zika vaccines engineered to eliminate enhancement of dengue infection via immunodominance switch.
Nat.Immunol., 22, 2021
6U9H
DownloadVisualize
BU of 6u9h by Molmil
Arabidopsis thaliana acetohydroxyacid synthase complex
分子名称: Acetolactate synthase small subunit 2, chloroplastic, Acetolactate synthase, ...
著者Guddat, L.W, Low, Y.S, Rao, Z.
登録日2019-09-08
公開日2020-07-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structures of fungal and plant acetohydroxyacid synthases.
Nature, 586, 2020
6U9D
DownloadVisualize
BU of 6u9d by Molmil
Saccharomyces cerevisiae acetohydroxyacid synthase
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Acetolactate synthase catalytic subunit, mitochondrial, ...
著者Guddat, L.W, Lonhienne, T.
登録日2019-09-08
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.194 Å)
主引用文献Structures of fungal and plant acetohydroxyacid synthases.
Nature, 586, 2020
7W8S
DownloadVisualize
BU of 7w8s by Molmil
Structure of SARS-CoV-2 spike receptor-binding domain Y453F mutation complexed with American mink ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike protein S1, ...
著者Su, C, Qi, J.X, Gao, G.F.
登録日2021-12-08
公開日2022-08-17
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Molecular Basis of Mink ACE2 Binding to SARS-CoV-2 and Its Mink-Derived Variants.
J.Virol., 96, 2022
7WA1
DownloadVisualize
BU of 7wa1 by Molmil
Structure of SARS-CoV-2 spike receptor-binding domain F486L mutation complexed with American mink ACE2
分子名称: Angiotensin-converting enzyme 2, Spike protein S1, ZINC ION
著者Su, C, Qi, J.X, Gao, G.F.
登録日2021-12-11
公開日2022-08-17
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Molecular Basis of Mink ACE2 Binding to SARS-CoV-2 and Its Mink-Derived Variants.
J.Virol., 96, 2022
8YLZ
DownloadVisualize
BU of 8ylz by Molmil
Structure of a cis-Geranylfarnesyl Diphosphate Synthase from Streptomyces clavuligerus
分子名称: Isoprenyl transferase
著者Li, F.R, Wang, Q.L, Pan, X.M, Dong, L.B.
登録日2024-03-07
公開日2024-05-08
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Discovery, Structure, and Engineering of a cis-Geranylfarnesyl Diphosphate Synthase.
Angew.Chem.Int.Ed.Engl., 63, 2024
8Y86
DownloadVisualize
BU of 8y86 by Molmil
Human AE3 with NaHCO3-
分子名称: Anion exchange protein 3, BICARBONATE ION
著者Jian, L, Zhang, Q, Yao, D, Cao, Y.
登録日2024-02-06
公開日2024-07-31
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献The structural insight into the functional modulation of human anion exchanger 3.
Nat Commun, 15, 2024
7X1M
DownloadVisualize
BU of 7x1m by Molmil
The complex structure of Omicron BA.1 RBD with BD604, S309,and S304
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, BD-604 Fab heavy chain, BD-604 Fab light chain, ...
著者Huang, M, Xie, Y.F, Qi, J.X.
登録日2022-02-24
公開日2022-07-06
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.74 Å)
主引用文献Atlas of currently available human neutralizing antibodies against SARS-CoV-2 and escape by Omicron sub-variants BA.1/BA.1.1/BA.2/BA.3.
Immunity, 55, 2022
6VZ8
DownloadVisualize
BU of 6vz8 by Molmil
Arabidopsis thaliana acetohydroxyacid synthase complex with valine bound
分子名称: Acetolactate synthase small subunit 2, chloroplastic, Acetolactate synthase, ...
著者Guddat, L.W, Low, Y.S.
登録日2020-02-27
公開日2020-07-15
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structures of fungal and plant acetohydroxyacid synthases.
Nature, 586, 2020

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon