Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8DRV
DownloadVisualize
BU of 8drv by Molmil
Product structure of SARS-CoV-2 Mpro C145A mutant in complex with nsp8-nsp9 (C8) cut site sequence
分子名称: Fusion protein of 3C-like proteinase nsp5 and nsp8-nsp9 (C8) cut site, PENTAETHYLENE GLYCOL
著者Lee, J, Kenward, C, Worrall, L.J, Vuckovic, M, Paetzel, M, Strynadka, N.C.J.
登録日2022-07-21
公開日2022-09-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献X-ray crystallographic characterization of the SARS-CoV-2 main protease polyprotein cleavage sites essential for viral processing and maturation.
Nat Commun, 13, 2022
8DRY
DownloadVisualize
BU of 8dry by Molmil
Product structure of SARS-CoV-2 Mpro C145A mutant in complex with nsp12-nsp13 (C12) cut site sequence
分子名称: DI(HYDROXYETHYL)ETHER, Fusion protein of 3C-like proteinase nsp5 and nsp12-nsp13 (C12) cut site
著者Lee, J, Kenward, C, Worrall, L.J, Vuckovic, M, Paetzel, M, Strynadka, N.C.J.
登録日2022-07-21
公開日2022-09-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献X-ray crystallographic characterization of the SARS-CoV-2 main protease polyprotein cleavage sites essential for viral processing and maturation.
Nat Commun, 13, 2022
8DS0
DownloadVisualize
BU of 8ds0 by Molmil
Product structure of SARS-CoV-2 Mpro C145A mutant in complex with nsp14-nsp15 (C14) cut site sequence (form 2)
分子名称: 3C-like proteinase nsp5, DI(HYDROXYETHYL)ETHER
著者Lee, J, Kenward, C, Worrall, L.J, Vuckovic, M, Paetzel, M, Strynadka, N.C.J.
登録日2022-07-21
公開日2022-09-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray crystallographic characterization of the SARS-CoV-2 main protease polyprotein cleavage sites essential for viral processing and maturation.
Nat Commun, 13, 2022
8DRZ
DownloadVisualize
BU of 8drz by Molmil
Product structure of SARS-CoV-2 Mpro C145A mutant in complex with nsp13-nsp14 (C13) cut site sequence
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3C-like proteinase nsp5, DI(HYDROXYETHYL)ETHER, ...
著者Lee, J, Kenward, C, Worrall, L.J, Vuckovic, M, Paetzel, M, Strynadka, N.C.J.
登録日2022-07-21
公開日2022-09-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献X-ray crystallographic characterization of the SARS-CoV-2 main protease polyprotein cleavage sites essential for viral processing and maturation.
Nat Commun, 13, 2022
8DS2
DownloadVisualize
BU of 8ds2 by Molmil
Structure of SARS-CoV-2 Mpro in complex with the nsp13-nsp14 (C13) cut site sequence (form 2)
分子名称: 3C-like proteinase nsp5, GLYCEROL, SODIUM ION
著者Lee, J, Kenward, C, Worrall, L.J, Vuckovic, M, Paetzel, M, Strynadka, N.C.J.
登録日2022-07-21
公開日2022-09-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-ray crystallographic characterization of the SARS-CoV-2 main protease polyprotein cleavage sites essential for viral processing and maturation.
Nat Commun, 13, 2022
8DS1
DownloadVisualize
BU of 8ds1 by Molmil
Structure of SARS-CoV-2 Mpro in complex with nsp12-nsp13 (C12) cut site sequence
分子名称: 3C-like proteinase nsp5, DI(HYDROXYETHYL)ETHER, SODIUM ION
著者Lee, J, Kenward, C, Worrall, L.J, Vuckovic, M, Paetzel, M, Strynadka, N.C.J.
登録日2022-07-21
公開日2022-09-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献X-ray crystallographic characterization of the SARS-CoV-2 main protease polyprotein cleavage sites essential for viral processing and maturation.
Nat Commun, 13, 2022
3OPD
DownloadVisualize
BU of 3opd by Molmil
Crystal Structure of the N-terminal domain of an HSP90 from Trypanosoma Brucei, Tb10.26.1080 in the presence of a benzamide derivative
分子名称: 4-[6,6-dimethyl-4-oxo-3-(trifluoromethyl)-4,5,6,7-tetrahydro-1H-indazol-1-yl]-2-[(cis-4-hydroxycyclohexyl)amino]benzamide, Heat shock protein 83
著者Pizarro, J.C, Wernimont, A.K, Hutchinson, A, Sullivan, H, Chamberlain, K, Weadge, J, Cossar, D, Li, Y, Kozieradzki, I, Bochkarev, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Wyatt, P.G, Fairlamb, A.H, MacKenzie, C, Ferguson, M.A.J, Hui, R, Hills, T, Structural Genomics Consortium (SGC)
登録日2010-08-31
公開日2010-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Exploring the Trypanosoma brucei Hsp83 potential as a target for structure guided drug design.
PLoS Negl Trop Dis, 7, 2013
3OMU
DownloadVisualize
BU of 3omu by Molmil
Crystal Structure of the N-terminal domain of an HSP90 from Trypanosoma Brucei, Tb10.26.1080 in the presence of a thienopyrimidine derivative
分子名称: 2-amino-4-{2,4-dichloro-5-[2-(diethylamino)ethoxy]phenyl}-N-ethylthieno[2,3-d]pyrimidine-6-carboxamide, Heat shock protein 83
著者Wernimont, A.K, Hutchinson, A, Sullivan, H, Weadge, J, Cossar, D, Li, Y, Kozieradzki, I, Bochkarev, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Wyatt, P.G, Fairlamb, A.H, MacKenzie, C, Ferguson, M.A.J, Hui, R, Pizarro, J.C, Hills, T, Structural Genomics Consortium (SGC)
登録日2010-08-27
公開日2010-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Exploring the Trypanosoma brucei Hsp83 potential as a target for structure guided drug design.
PLoS Negl Trop Dis, 7, 2013
6ROW
DownloadVisualize
BU of 6row by Molmil
Haemonchus galactose containing glycoprotein complex
分子名称: Cysteine Protease, Parasite pepsinogen, Putative zinc metallopeptidase
著者Scarff, C.A, Thompson, R.F, Newlands, G.F.J, Jamson, H, Kennaway, C, da Silva, V.J, Rabelo, E.M, Song, C.F, Trinick, J, Smith, W.D, Muench, S.P.
登録日2019-05-13
公開日2020-03-25
最終更新日2020-04-22
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structure of the protective nematode protease complex H-gal-GP and its conservation across roundworm parasites.
Plos Pathog., 16, 2020
6RZN
DownloadVisualize
BU of 6rzn by Molmil
Crystal structure of the N-terminal carbohydrate binding module family 48 and ferulic acid esterase from the multi-enzyme CE1-GH62-GH10
分子名称: Ferulic acid esterase
著者Fredslund, F, Welner, D.H, Wilkens, C.
登録日2019-06-13
公開日2019-09-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.907 Å)
主引用文献A carbohydrate-binding family 48 module enables feruloyl esterase action on polymeric arabinoxylan.
J.Biol.Chem., 294, 2019
6RZO
DownloadVisualize
BU of 6rzo by Molmil
Crystal structure of the N-terminal carbohydrate binding module family 48 and ferulic acid esterase from the multi-enzyme CE1-GH62-GH10
分子名称: Ferulic acid esterase
著者Fredslund, F, Welner, D.H, Wilkens, C.
登録日2019-06-13
公開日2019-09-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.632 Å)
主引用文献A carbohydrate-binding family 48 module enables feruloyl esterase action on polymeric arabinoxylan.
J.Biol.Chem., 294, 2019
5NPT
DownloadVisualize
BU of 5npt by Molmil
Structure of the N-terminal domain of the yeast telomerase reverse transcriptase
分子名称: Telomerase reverse transcriptase
著者Rodina, E.V, Lebedev, A.A, Hakanpaa, J, Hackenberg, C, Petrova, O.A, Zvereva, M.I, Dontsova, O.A, Lamzin, V.S.
登録日2017-04-18
公開日2017-12-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and function of the N-terminal domain of the yeast telomerase reverse transcriptase.
Nucleic Acids Res., 46, 2018
3J34
DownloadVisualize
BU of 3j34 by Molmil
Structure of HIV-1 Capsid Protein by Cryo-EM
分子名称: capsid protein
著者Zhao, G, Perilla, J.R, Yufenyuy, E, Meng, X, Chen, B, Ning, J, Ahn, J, Gronenborn, A.M, Schulten, K, Aiken, C, Zhang, P.
登録日2013-02-23
公開日2013-05-29
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (8.6 Å)
主引用文献Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
3LHC
DownloadVisualize
BU of 3lhc by Molmil
Crystal structure of cyanovirin-n swapping domain b mutant
分子名称: Cyanovirin-N, PHOSPHATE ION, SODIUM ION
著者Matei, E, Zheng, A, Furey, W, Rose, J, Aiken, C, Gronenborn, A.M.
登録日2010-01-21
公開日2010-02-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Anti-HIV activity of defective cyanovirin-N mutants is restored by dimerization.
J.Biol.Chem., 285, 2010
2QSD
DownloadVisualize
BU of 2qsd by Molmil
Crystal structure of a protein Il1583 from Idiomarina loihiensis
分子名称: GLYCEROL, Uncharacterized conserved protein
著者Patskovsky, Y, Bonanno, J, Sauder, J.M, Romero, R, Rutter, M, Koss, J, Mckenzie, C, Gheyi, T, Bain, K, Wasserman, S.R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-07-30
公開日2007-08-14
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of a Protein Il1583 from Idiomarina loihiensis.
To be Published
2MB9
DownloadVisualize
BU of 2mb9 by Molmil
Human Bcl10 CARD
分子名称: B-cell lymphoma/leukemia 10
著者Zheng, C, Bracken, C, Wu, H.
登録日2013-07-26
公開日2013-10-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Architecture of the CARMA1/Bcl10/MALT1 Signalosome: Nucleation-Induced Filamentous Assembly.
Mol.Cell, 51, 2013
1N1D
DownloadVisualize
BU of 1n1d by Molmil
Glycerol-3-phosphate cytidylyltransferase complexed with CDP-glycerol
分子名称: SULFATE ION, [CYTIDINE-5'-PHOSPHATE] GLYCERYLPHOSPHORIC ACID ESTER, glycerol-3-phosphate cytidylyltransferase
著者Pattridge, K.A, Weber, C.H, Friesen, J.A, Sankar, S, Kent, C, Ludwig, M.L.
登録日2002-10-17
公開日2003-11-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Glycerol-3-phosphate cytidylyltransferase. Structural changes induced by binding of CDP-glycerol and the role of lysine residues in catalysis
J.Biol.Chem., 278, 2003
2I52
DownloadVisualize
BU of 2i52 by Molmil
Crystal structure of protein PTO0218 from Picrophilus torridus, Pfam DUF372
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Ramagopal, U.A, Gilmore, J, Toro, R, Bain, K.T, McKenzie, C, Reyes, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-08-23
公開日2006-09-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structure of hypothetical protein PTO0218 from Picrophilus torridus
To be Published
1NW1
DownloadVisualize
BU of 1nw1 by Molmil
Crystal Structure of Choline Kinase
分子名称: CALCIUM ION, Choline kinase (49.2 kD)
著者Peisach, D, Gee, P, Kent, C, Xu, Z.
登録日2003-02-05
公開日2003-06-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献The Crystal Structure of Choline Kinase Reveals a Eukaryotic Protein Kinase Fold
Structure, 11, 2003
2F95
DownloadVisualize
BU of 2f95 by Molmil
M intermediate structure of sensory rhodopsin II/transducer complex in combination with the ground state structure
分子名称: RETINAL, Sensory rhodopsin II, Sensory rhodopsin II transducer, ...
著者Moukhametzianov, R.I, Klare, J.P, Efremov, R.G, Baecken, C, Goeppner, A, Labahn, J, Engelhard, M, Bueldt, G, Gordeliy, V.I.
登録日2005-12-05
公開日2006-03-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Development of the signal in sensory rhodopsin and its transfer to the cognate transducer.
Nature, 440, 2006
2F93
DownloadVisualize
BU of 2f93 by Molmil
K Intermediate Structure of Sensory Rhodopsin II/Transducer Complex in Combination with the Ground State Structure
分子名称: RETINAL, Sensory rhodopsin II, Sensory rhodopsin II transducer, ...
著者Moukhametzianov, R.I, Klare, J.P, Efremov, R.G, Baecken, C, Goeppner, A, Labahn, J, Engelhard, M, Bueldt, G, Gordeliy, V.I.
登録日2005-12-05
公開日2006-03-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Development of the signal in sensory rhodopsin and its transfer to the cognate transducer.
Nature, 440, 2006
1BUG
DownloadVisualize
BU of 1bug by Molmil
CATECHOL OXIDASE FROM IPOMOEA BATATAS (SWEET POTATOES)-INHIBITOR COMPLEX WITH PHENYLTHIOUREA (PTU)
分子名称: COPPER (II) ION, N-PHENYLTHIOUREA, PROTEIN (CATECHOL OXIDASE)
著者Klabunde, T, Eicken, C, Sacchettini, J.C, Krebs, B.
登録日1998-09-03
公開日1999-09-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of a plant catechol oxidase containing a dicopper center.
Nat.Struct.Biol., 5, 1998
1BT2
DownloadVisualize
BU of 1bt2 by Molmil
CATECHOL OXIDASE FROM IPOMOEA BATATAS (SWEET POTATOES) IN THE REDUCED CU(I)-CU(I) STATE
分子名称: CU-O-CU LINKAGE, PROTEIN (CATECHOL OXIDASE)
著者Klabunde, T, Eicken, C, Sacchettini, J.C, Krebs, B.
登録日1998-09-02
公開日1999-09-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of a plant catechol oxidase containing a dicopper center.
Nat.Struct.Biol., 5, 1998
1BT3
DownloadVisualize
BU of 1bt3 by Molmil
CATECHOL OXIDASE FROM IPOMOEA BATATAS (SWEET POTATOES) IN THE NATIVE CU(II)-CU(II) STATE
分子名称: CU-O-CU LINKAGE, PROTEIN (CATECHOL OXIDASE)
著者Klabunde, T, Eicken, C, Sacchettini, J.C, Krebs, B.
登録日1998-09-02
公開日1999-09-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a plant catechol oxidase containing a dicopper center.
Nat.Struct.Biol., 5, 1998
1BT1
DownloadVisualize
BU of 1bt1 by Molmil
CATECHOL OXIDASE FROM IPOMOEA BATATAS (SWEET POTATOES) IN THE NATIVE CU(II)-CU(II) STATE
分子名称: CU-O-CU LINKAGE, PROTEIN (CATECHOL OXIDASE)
著者Klabunde, T, Eicken, C, Sacchettini, J.C, Krebs, B.
登録日1998-09-02
公開日1999-09-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of a plant catechol oxidase containing a dicopper center.
Nat.Struct.Biol., 5, 1998

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon