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2DR9
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BU of 2dr9 by Molmil
Complex structure of CCA-adding enzyme with tRNAminiDCC
分子名称: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
著者Tomita, K, Ishitani, R, Fukai, S, Nureki, O.
登録日2006-06-08
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
2EQB
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BU of 2eqb by Molmil
Crystal structure of the Rab GTPase Sec4p, the Sec2p GEF domain, and phosphate complex
分子名称: PHOSPHATE ION, Rab guanine nucleotide exchange factor SEC2, Ras-related protein SEC4
著者Sato, Y, Fukai, S, Ishitani, R, Nureki, O.
登録日2007-03-30
公開日2007-05-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the Sec4p{middle dot}Sec2p complex in the nucleotide exchanging intermediate state
Proc.Natl.Acad.Sci.Usa, 104, 2007
2DRA
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BU of 2dra by Molmil
Complex structure of CCA-adding enzyme with tRNAminiDCC and ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CCA-adding enzyme, MAGNESIUM ION, ...
著者Tomita, K, Ishitani, R, Fukai, S, Nureki, O.
登録日2006-06-08
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
2DR5
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BU of 2dr5 by Molmil
Complex structure of CCA adding enzyme with mini-helix lacking CCA
分子名称: CCA-adding enzyme, SULFATE ION, tRNA (32-MER)
著者Tomita, K, Ishitani, R, Fukai, S, Nureki, O.
登録日2006-06-08
公開日2006-10-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
2DRB
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BU of 2drb by Molmil
Complex structure of CCA-adding enzyme with tRNAminiCCA
分子名称: CCA-adding enzyme, SULFATE ION, tRNA (35-MER)
著者Tomita, K, Ishitani, R, Fukai, S, Nureki, O.
登録日2006-06-08
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
2DR7
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BU of 2dr7 by Molmil
Complex structure of CCA-adding enzyme with tRNAminiDC
分子名称: CCA-adding enzyme, SULFATE ION, tRNA (33-MER)
著者Tomita, K, Ishitani, R, Fukai, S, Nureki, O.
登録日2006-06-08
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
2DVI
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BU of 2dvi by Molmil
Complex structure of CCA-adding enzyme, mini-DCC and CTP
分子名称: CCA-adding enzyme, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Tomita, K, Ishitani, R, Fukai, S, Nureki, O.
登録日2006-07-31
公開日2006-11-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
4GEL
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BU of 4gel by Molmil
Crystal structure of Zucchini
分子名称: 1,2-ETHANEDIOL, Mitochondrial cardiolipin hydrolase, PHOSPHATE ION, ...
著者Nishimasu, H, Fukuhara, S, Ishitani, R, Nureki, O.
登録日2012-08-02
公開日2012-10-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.756 Å)
主引用文献Structure and function of Zucchini endoribonuclease in piRNA biogenesis
Nature, 491, 2012
4GEN
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BU of 4gen by Molmil
Crystal structure of Zucchini (monomer)
分子名称: CHLORIDE ION, Mitochondrial cardiolipin hydrolase
著者Nishimasu, H, Fukuhara, S, Ishitani, R, Nureki, O.
登録日2012-08-02
公開日2012-10-17
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and function of Zucchini endoribonuclease in piRNA biogenesis
Nature, 491, 2012
4GEM
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BU of 4gem by Molmil
Crystal structure of Zucchini (K171A)
分子名称: 1,2-ETHANEDIOL, Mitochondrial cardiolipin hydrolase, ZINC ION
著者Nishimasu, H, Fukuhara, S, Ishitani, R, Nureki, O.
登録日2012-08-02
公開日2012-10-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.206 Å)
主引用文献Structure and function of Zucchini endoribonuclease in piRNA biogenesis
Nature, 491, 2012
4GTW
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BU of 4gtw by Molmil
Crystal structure of mouse Enpp1 in complex with AMP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE MONOPHOSPHATE, ...
著者Kato, K, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2012-08-29
公開日2012-11-07
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Enpp1, an extracellular glycoprotein involved in bone mineralization and insulin signaling.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GTZ
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BU of 4gtz by Molmil
Crystal structure of mouse Enpp1 in complex with CMP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Kato, K, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2012-08-29
公開日2012-11-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.191 Å)
主引用文献Crystal structure of Enpp1, an extracellular glycoprotein involved in bone mineralization and insulin signaling.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GTY
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BU of 4gty by Molmil
Crystal structure of mouse Enpp1 in complex with GMP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Kato, K, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2012-08-29
公開日2012-11-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Crystal structure of Enpp1, an extracellular glycoprotein involved in bone mineralization and insulin signaling.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GTX
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BU of 4gtx by Molmil
Crystal structure of mouse Enpp1 in complex with TMP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Kato, K, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2012-08-29
公開日2012-11-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.201 Å)
主引用文献Crystal structure of Enpp1, an extracellular glycoprotein involved in bone mineralization and insulin signaling.
Proc.Natl.Acad.Sci.USA, 109, 2012
4IKX
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BU of 4ikx by Molmil
Crystal structure of peptide transporter POT (E310Q mutant)
分子名称: Di-tripeptide ABC transporter (Permease), OLEIC ACID, SULFATE ION
著者Doki, S, Kato, H.E, Ishitani, R, Nureki, O.
登録日2012-12-28
公開日2013-07-10
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for dynamic mechanism of proton-coupled symport by the peptide transporter POT.
Proc.Natl.Acad.Sci.USA, 110, 2013
4IKV
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BU of 4ikv by Molmil
Crystal structure of peptide transporter POT
分子名称: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Di-tripeptide ABC transporter (Permease), OLEIC ACID, ...
著者Doki, S, Kato, H.E, Ishitani, R, Nureki, O.
登録日2012-12-28
公開日2013-07-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for dynamic mechanism of proton-coupled symport by the peptide transporter POT.
Proc.Natl.Acad.Sci.USA, 110, 2013
4IKZ
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BU of 4ikz by Molmil
Crystal structure of peptide transporter POT (E310Q mutant) in complex with alafosfalin
分子名称: Di-tripeptide ABC transporter (Permease), N-[(1R)-1-phosphonoethyl]-L-alaninamide, SULFATE ION
著者Doki, S, Kato, H.E, Ishitani, R, Nureki, O.
登録日2012-12-28
公開日2013-07-10
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for dynamic mechanism of proton-coupled symport by the peptide transporter POT.
Proc.Natl.Acad.Sci.USA, 110, 2013
4IKY
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BU of 4iky by Molmil
Crystal structure of peptide transporter POT (E310Q mutant) in complex with sulfate
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Di-tripeptide ABC transporter (Permease), OLEIC ACID, ...
著者Doki, S, Kato, H.E, Ishitani, R, Nureki, O.
登録日2012-12-28
公開日2013-07-10
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for dynamic mechanism of proton-coupled symport by the peptide transporter POT.
Proc.Natl.Acad.Sci.USA, 110, 2013
4IKW
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BU of 4ikw by Molmil
Crystal structure of peptide transporter POT in complex with sulfate
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Di-tripeptide ABC transporter (Permease), OLEIC ACID, ...
著者Doki, S, Kato, H.E, Ishitani, R, Nureki, O.
登録日2012-12-28
公開日2013-07-10
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.004 Å)
主引用文献Structural basis for dynamic mechanism of proton-coupled symport by the peptide transporter POT.
Proc.Natl.Acad.Sci.USA, 110, 2013
4YBG
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BU of 4ybg by Molmil
Crystal structure of the MAEL domain of Drosophila melanogaster Maelstrom
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Protein maelstrom, ...
著者Matsumoto, N, Ishitani, R, Nishimasu, H, Nureki, O.
登録日2015-02-18
公開日2015-04-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献Crystal Structure and Activity of the Endoribonuclease Domain of the piRNA Pathway Factor Maelstrom
Cell Rep, 11, 2015
6IU4
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BU of 6iu4 by Molmil
Crystal structure of iron transporter VIT1 with cobalt ion
分子名称: COBALT (II) ION, VIT1, ZINC ION
著者Kato, T, Nishizawa, T, Yamashita, K, Taniguchi, R, Kumazaki, K, Ishitani, R, Nureki, O.
登録日2018-11-27
公開日2019-02-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of plant vacuolar iron transporter VIT1.
Nat Plants, 5, 2019
1IRX
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BU of 1irx by Molmil
Crystal structure of class I lysyl-tRNA synthetase
分子名称: ZINC ION, lysyl-tRNA synthetase
著者Nureki, O, Terada, T, Ishitani, R, Ambrogelly, A, Ibba, M, Soll, D, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-10-25
公開日2002-04-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Functional convergence of two lysyl-tRNA synthetases with unrelated topologies.
Nat.Struct.Biol., 9, 2002
6IJE
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BU of 6ije by Molmil
Crystal structure of the type VI amidase immunity (Tai4) from Agrobacterium tumefaciens
分子名称: 1,2-ETHANEDIOL, Tai4
著者Fukuhara, S, Nakane, T, Yamashita, K, Ishii, R, Ishitani, R, Nureki, O.
登録日2018-10-09
公開日2018-12-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of the Agrobacterium tumefaciens type VI effector-immunity complex.
Acta Crystallogr F Struct Biol Commun, 74, 2018
1IPA
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BU of 1ipa by Molmil
CRYSTAL STRUCTURE OF RNA 2'-O RIBOSE METHYLTRANSFERASE
分子名称: RNA 2'-O-RIBOSE METHYLTRANSFERASE
著者Nureki, O, Shirouzu, M, Hashimoto, K, Ishitani, R, Terada, T, Tamakoshi, M, Oshima, T, Chijimatsu, M, Takio, K, Vassylyev, D.G, Shibata, T, Inoue, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-05-02
公開日2002-07-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献An enzyme with a deep trefoil knot for the active-site architecture.
Acta Crystallogr.,Sect.D, 58, 2002
1IVO
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BU of 1ivo by Molmil
Crystal Structure of the Complex of Human Epidermal Growth Factor and Receptor Extracellular Domains.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Epidermal Growth Factor Receptor, ...
著者Ogiso, H, Ishitani, R, Nureki, O, Fukai, S, Yamanaka, M, Kim, J.H, Saito, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-28
公開日2002-10-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal Structure of the Complex of Human Epidermal Growth Factor and Receptor Extracellular Domains.
Cell(Cambridge,Mass.), 110, 2002

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