8EJP
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![BU of 8ejp by Molmil](/molmil-images/mine/8ejp) | Crystal structure of the homeodomain of Platypus sDUX in complex with DNA containing 5-Bromouracil | 分子名称: | 1,2-ETHANEDIOL, DNA (5'-D(*GP*CP*GP*TP*AP*AP*TP*CP*TP*AP*AP*TP*CP*AP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*TP*GP*AP*TP*TP*AP*GP*AP*TP*TP*AP*CP*GP*C)-3'), ... | 著者 | Yin, L.L, Shi, K, Aihara, H. | 登録日 | 2022-09-18 | 公開日 | 2023-09-20 | 最終更新日 | 2023-10-04 | 実験手法 | X-RAY DIFFRACTION (2.174 Å) | 主引用文献 | Antagonism among DUX family members evolved from an ancestral toxic single homeodomain protein. Iscience, 26, 2023
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6E8C
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![BU of 6e8c by Molmil](/molmil-images/mine/6e8c) | Crystal structure of the double homeodomain of DUX4 in complex with DNA | 分子名称: | DNA (5'-D(*GP*CP*GP*TP*AP*AP*TP*CP*TP*AP*AP*TP*CP*AP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*TP*GP*AP*TP*TP*AP*GP*AP*TP*TP*AP*CP*GP*C)-3'), Double homeobox protein 4 | 著者 | Lee, J.K, Bosnakovski, D, Toso, E.A, Dinh, T, Banerjee, S, Bohl, T.E, Shi, K, Kurahashi, K, Kyba, M, Aihara, H. | 登録日 | 2018-07-27 | 公開日 | 2018-12-26 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (2.12 Å) | 主引用文献 | Crystal Structure of the Double Homeodomain of DUX4 in Complex with DNA. Cell Rep, 25, 2018
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7KM6
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![BU of 7km6 by Molmil](/molmil-images/mine/7km6) | APOBEC3B antibody 5G7 Fv-clasp | 分子名称: | 1,2-ETHANEDIOL, 5G7 human monoclonal FAB heavy chain, 5G7 human monoclonal FAB light chain, ... | 著者 | Tang, H, Shi, K, Aihara, H. | 登録日 | 2020-11-02 | 公開日 | 2021-05-12 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.67 Å) | 主引用文献 | Structural Characterization of a Minimal Antibody against Human APOBEC3B. Viruses, 13, 2021
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7KM5
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![BU of 7km5 by Molmil](/molmil-images/mine/7km5) | Crystal structure of SARS-CoV-2 RBD complexed with Nanosota-1 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Spike protein S1, ... | 著者 | Ye, G, Shi, K, Aihara, H, Li, F. | 登録日 | 2020-11-02 | 公開日 | 2021-08-04 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (3.19 Å) | 主引用文献 | The development of Nanosota - 1 as anti-SARS-CoV-2 nanobody drug candidates. Elife, 10, 2021
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5HX5
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![BU of 5hx5 by Molmil](/molmil-images/mine/5hx5) | APOBEC3F Catalytic Domain Crystal Structure | 分子名称: | DNA dC->dU-editing enzyme APOBEC-3F, ZINC ION | 著者 | Shaban, N.M, Shi, K, Aihara, H, Harris, R.S. | 登録日 | 2016-01-29 | 公開日 | 2016-05-18 | 最終更新日 | 2023-09-27 | 実験手法 | X-RAY DIFFRACTION (2.33 Å) | 主引用文献 | 1.92 Angstrom Zinc-Free APOBEC3F Catalytic Domain Crystal Structure. J.Mol.Biol., 428, 2016
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5HX4
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7S6Q
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![BU of 7s6q by Molmil](/molmil-images/mine/7s6q) | Complex structure of Methane monooxygenase hydroxylase and regulatory subunit DBL2 | 分子名称: | 1,2-ETHANEDIOL, BENZOIC ACID, FE (III) ION, ... | 著者 | Johns, J.C, Banerjee, R, Semonis, M.M, Shi, K, Aihara, H, Lipscomb, J.D. | 登録日 | 2021-09-14 | 公開日 | 2021-12-29 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.96 Å) | 主引用文献 | X-ray Crystal Structures of Methane Monooxygenase Hydroxylase Complexes with Variants of Its Regulatory Component: Correlations with Altered Reaction Cycle Dynamics. Biochemistry, 61, 2022
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7S7H
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![BU of 7s7h by Molmil](/molmil-images/mine/7s7h) | Complex structure of Methane monooxygenase hydroxylase and regulatory subunit DBL2 | 分子名称: | 1,2-ETHANEDIOL, FE (III) ION, Methane monooxygenase beta chain, ... | 著者 | Johns, J.C, Banerjee, R, Semonis, M.M, Shi, K, Aihara, H, Lipscomb, J.D. | 登録日 | 2021-09-16 | 公開日 | 2021-12-29 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | X-ray Crystal Structures of Methane Monooxygenase Hydroxylase Complexes with Variants of Its Regulatory Component: Correlations with Altered Reaction Cycle Dynamics. Biochemistry, 61, 2022
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7M8R
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![BU of 7m8r by Molmil](/molmil-images/mine/7m8r) | Complex structure of Methane monooxygenase hydroxylase and regulatory subunit with fluorosubstituted tryptophans | 分子名称: | 1,1,1-tris(fluoranyl)propan-2-one, 1,2-ETHANEDIOL, BENZOIC ACID, ... | 著者 | Johns, J.C, Banerjee, R, Shi, K, Semonis, M.M, Aihara, H, Pomerantz, W.C.K, Lipscomb, J.D. | 登録日 | 2021-03-30 | 公開日 | 2021-07-28 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.22 Å) | 主引用文献 | Soluble Methane Monooxygenase Component Interactions Monitored by 19 F NMR. Biochemistry, 60, 2021
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7M8Q
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![BU of 7m8q by Molmil](/molmil-images/mine/7m8q) | Complex structure of Methane monooxygenase hydroxylase and regulatory subunit with fluorosubstituted tryptophans | 分子名称: | 1,2-ETHANEDIOL, BENZOIC ACID, FE (III) ION, ... | 著者 | Johns, J.C, Banerjee, R, Shi, K, Semonis, M.M, Aihara, H, Pomerantz, W.C.K, Lipscomb, J.D. | 登録日 | 2021-03-30 | 公開日 | 2021-07-28 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.08 Å) | 主引用文献 | Soluble Methane Monooxygenase Component Interactions Monitored by 19 F NMR. Biochemistry, 60, 2021
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7S6T
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![BU of 7s6t by Molmil](/molmil-images/mine/7s6t) | Complex structure of Methane monooxygenase hydroxylase and regulatory subunit H33A | 分子名称: | 1,2-ETHANEDIOL, BENZOIC ACID, FE (III) ION, ... | 著者 | Johns, J.C, Banerjee, R, Semonis, M.M, Shi, K, Aihara, H, Lipscomb, J.D. | 登録日 | 2021-09-14 | 公開日 | 2021-12-29 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.82 Å) | 主引用文献 | X-ray Crystal Structures of Methane Monooxygenase Hydroxylase Complexes with Variants of Its Regulatory Component: Correlations with Altered Reaction Cycle Dynamics. Biochemistry, 61, 2022
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7S6R
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![BU of 7s6r by Molmil](/molmil-images/mine/7s6r) | Complex structure of Methane monooxygenase hydroxylase and regulatory subunit with H5A mutation | 分子名称: | 1,2-ETHANEDIOL, BENZOIC ACID, FE (III) ION, ... | 著者 | Johns, J.C, Banerjee, R, Semonis, M.M, Shi, K, Aihara, H, Lipscomb, J.D. | 登録日 | 2021-09-14 | 公開日 | 2021-12-29 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.89 Å) | 主引用文献 | X-ray Crystal Structures of Methane Monooxygenase Hydroxylase Complexes with Variants of Its Regulatory Component: Correlations with Altered Reaction Cycle Dynamics. Biochemistry, 61, 2022
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7S6S
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![BU of 7s6s by Molmil](/molmil-images/mine/7s6s) | Complex structure of Methane monooxygenase hydroxylase and regulatory subunit DBL1 | 分子名称: | 1,2-ETHANEDIOL, BENZOIC ACID, FE (III) ION, ... | 著者 | Johns, J.C, Banerjee, R, Semonis, M.M, Shi, K, Aihara, H, Lipscomb, J.D. | 登録日 | 2021-09-14 | 公開日 | 2021-12-29 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.98 Å) | 主引用文献 | X-ray Crystal Structures of Methane Monooxygenase Hydroxylase Complexes with Variants of Its Regulatory Component: Correlations with Altered Reaction Cycle Dynamics. Biochemistry, 61, 2022
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7JT4
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![BU of 7jt4 by Molmil](/molmil-images/mine/7jt4) | Crystal Structure of BPTF bromodomain labelled with 5-fluoro-tryptophan | 分子名称: | Nucleosome-remodeling factor subunit BPTF | 著者 | Johnson, J.A, Shi, K, Aihara, H, Pomerantz, W.C.K. | 登録日 | 2020-08-17 | 公開日 | 2021-07-28 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.06 Å) | 主引用文献 | Selectivity, ligand deconstruction, and cellular activity analysis of a BPTF bromodomain inhibitor Org.Biomol.Chem., 17, 2019
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5IRS
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![BU of 5irs by Molmil](/molmil-images/mine/5irs) | crystal structure of the proteasomal Rpn13 PRU-domain | 分子名称: | 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Proteasomal ubiquitin receptor ADRM1 | 著者 | Chen, X, Shi, K, Walters, K, Aihara, H. | 登録日 | 2016-03-14 | 公開日 | 2016-07-20 | 最終更新日 | 2023-09-27 | 実験手法 | X-RAY DIFFRACTION (1.796 Å) | 主引用文献 | Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome. Structure, 24, 2016
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5B3I
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![BU of 5b3i by Molmil](/molmil-images/mine/5b3i) | Homo-dimeric structure of cytochrome c' from Thermophilic Hydrogenophilus thermoluteolus | 分子名称: | Cytochrome c prime, HEME C | 著者 | Fujii, S, Oki, H, Kawahara, K, Yamane, D, Yamanaka, M, Maruno, T, Kobayashi, Y, Masanari, M, Wakai, S, Nishihara, H, Ohkubo, T, Sambongi, Y. | 登録日 | 2016-02-29 | 公開日 | 2017-03-01 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.89 Å) | 主引用文献 | Structural and functional insights into thermally stable cytochrome c' from a thermophile Protein Sci., 26, 2017
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8VQR
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![BU of 8vqr by Molmil](/molmil-images/mine/8vqr) | Crystal structure of chimeric SARS-CoV-2 RBD complexed with chimeric raccoon dog ACE2 | 分子名称: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Hsueh, F.-C, Shi, K, Aihara, H, Li, F. | 登録日 | 2024-01-19 | 公開日 | 2024-05-01 | 最終更新日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (2.565 Å) | 主引用文献 | Structural basis for raccoon dog receptor recognition by SARS-CoV-2 To Be Published
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1CKK
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![BU of 1ckk by Molmil](/molmil-images/mine/1ckk) | CALMODULIN/RAT CA2+/CALMODULIN DEPENDENT PROTEIN KINASE FRAGMENT | 分子名称: | CALCIUM ION, Calcium/calmodulin-dependent protein kinase kinase 1, Calmodulin-1 | 著者 | Osawa, M, Tokumitsu, H, Swindells, M.B, Kurihara, H, Orita, M, Shibanuma, T, Furuya, T, Ikura, M. | 登録日 | 1998-11-20 | 公開日 | 1999-09-10 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | A novel target recognition revealed by calmodulin in complex with Ca2+-calmodulin-dependent kinase kinase. Nat.Struct.Biol., 6, 1999
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1GCZ
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![BU of 1gcz by Molmil](/molmil-images/mine/1gcz) | |
2CWF
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![BU of 2cwf by Molmil](/molmil-images/mine/2cwf) | Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH | 分子名称: | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, delta1-piperideine-2-carboxylate reductase | 著者 | Goto, M, Muramatsu, H, Mihara, H, Kurihara, T, Esaki, N, Omi, R, Miyahara, I, Hirotsu, K. | 登録日 | 2005-06-20 | 公開日 | 2005-10-04 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction J.Biol.Chem., 280, 2005
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6JR0
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![BU of 6jr0 by Molmil](/molmil-images/mine/6jr0) | Crystal structure of the human nucleosome phased with 12 selenium atoms | 分子名称: | CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ... | 著者 | Saotome, M, Horikoshi, N, Urano, K, Kujirai, T, Yuzurihara, H, Kurumizaka, H, Kagawa, W. | 登録日 | 2019-04-02 | 公開日 | 2019-10-02 | 最終更新日 | 2019-10-23 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Structure determination of the nucleosome core particle by selenium SAD phasing. Acta Crystallogr D Struct Biol, 75, 2019
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4F43
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4F41
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6JR1
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![BU of 6jr1 by Molmil](/molmil-images/mine/6jr1) | Crystal structure of the human nucleosome phased with 16 selenium atoms | 分子名称: | CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ... | 著者 | Saotome, M, Horikoshi, N, Urano, K, Kujirai, T, Yuzurihara, H, Kurumizaka, H, Kagawa, W. | 登録日 | 2019-04-02 | 公開日 | 2019-10-02 | 最終更新日 | 2019-10-23 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structure determination of the nucleosome core particle by selenium SAD phasing. Acta Crystallogr D Struct Biol, 75, 2019
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8FR5
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![BU of 8fr5 by Molmil](/molmil-images/mine/8fr5) | Crystal structure of the Human Smacovirus 1 Rep domain | 分子名称: | MANGANESE (II) ION, Rep, SODIUM ION | 著者 | Limon, L.K, Shi, K, Dao, A, Rugloski, J, Tompkins, K.J, Aihara, H, Gordon, W.R, Evans IIII, R.L. | 登録日 | 2023-01-06 | 公開日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.33 Å) | 主引用文献 | The crystal structure of the human smacovirus 1 Rep domain. Acta Crystallogr.,Sect.F, 79, 2023
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